FFCP PHASE1:Hg19::chr1:153747915..153747927,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153747915..153747927,+
|short_description=p5@SLC27A3
|description=CAGE_peak_5_at_SLC27A3_5end
|association_with_transcript=120bp_to_ENST00000468403_5end
|...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11000 | |EntrezGene=11000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10997 | |HGNC=10997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_ENST00000468403_5end | |||
|cluster_id=chr1:153747915..153747927,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_5_at_SLC27A3_5end | |||
|id=chr1:153747915..153747927,+ | |||
|ontology_enrichment_celltype=CL:0000557!2.41e-11!71;CL:0002009!2.65e-11!65;CL:0000990!8.97e-11!8;CL:0002393!3.45e-10!9;CL:0002397!3.45e-10!9;CL:0002194!9.38e-10!63;CL:0000576!9.38e-10!63;CL:0000040!9.38e-10!63;CL:0000559!9.38e-10!63;CL:0000839!1.38e-09!70;CL:0000766!4.40e-09!76;CL:0000451!1.90e-08!10;CL:0000860!6.83e-08!45;CL:0000453!8.87e-08!5;CL:0000840!1.97e-07!5;CL:0001029!1.97e-07!5;CL:0002057!3.58e-07!42;CL:0000763!5.32e-07!112;CL:0000049!5.32e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000840;4.58e-32;5!CL:0000990;1.66e-21;8!CL:0000451;1.18e-17;10!CL:0000235;9.08e-09;6!CL:0002393;1.17e-08;6!CL:0002397;1.17e-08;6!CL:0001014;4.29e-07;2!CL:0002262;4.29e-07;2!CL:1000398;4.29e-07;2!CL:0001016;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.07e-32,5;CL:0001029,4.07e-32,5;CL:0000990,1.54e-21,8;CL:0000451,1.11e-17,10;CL:0002009,2.64e-14,61;CL:0000557,5.99e-13,67;CL:0002194,1.00e-11,59;CL:0000576,1.00e-11,59;CL:0000040,1.00e-11,59;CL:0000559,1.00e-11,59;CL:0000839,2.07e-10,66;CL:0000766,1.75e-09,72;CL:0000235,1.00e-08,6;CL:0000763,1.15e-07,108;CL:0000049,1.15e-07,108;CL:0001014,3.93e-07,2;CL:0001016,3.93e-07,2;CL:0002262,4.42e-07,2;CL:1000398,4.42e-07,2;CL:0002031,8.59e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.58e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.58e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.50e-10!112;UBERON:0001474!5.99e-10!86;UBERON:0002390!8.21e-10!102;UBERON:0003061!8.21e-10!102;UBERON:0002405!1.48e-09!115;UBERON:0004765!3.96e-09!101;UBERON:0001434!3.96e-09!101;UBERON:0002371!4.26e-09!80;UBERON:0003081!2.67e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;4.29e-07;2!UBERON:0003497;4.29e-07;2!UBERON:0003909;4.29e-07;2!UBERON:0003835;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-11,76;UBERON:0001474,2.06e-10,82;UBERON:0004765,2.11e-09,90;UBERON:0002405,4.57e-09,93;UBERON:0002390,1.49e-08,98;UBERON:0003061,1.49e-08,98;UBERON:0001434,2.32e-08,100;UBERON:0002193,1.15e-07,108;UBERON:0001281,4.42e-07,2;UBERON:0003497,4.42e-07,2;UBERON:0003909,4.42e-07,2;UBERON:0003835,4.42e-07,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,1.34088328328186,0,0,0,4.17897005119742,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0.919421224478927,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.316462387440884,1.90129757680748,1.70083439972035,0.209658645508376,1.12328631146495,0.901061357049038,0,0.855038231223746,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,16.5519170763889,17.587103467226,20.8743998014618,0,0,0,0,0,0,0,0,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.980771418680752,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.680593098960126,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0.380508304469197,0.790204397959275,0,0.492434012174795,3.04205544681009,1.18904929830983,0,0,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0.063497894292169,0.763976851116555,0,1.71072446022705,0.308482478109971,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.674921674654501,1.5476039091159,0.121499113316049,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0.151649117541648,13.1314053430685,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54400723580486,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0.151557396436479,0.803892390468535,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.642301571672949,0.704772020479856,0,1.34088328328186,0,0,0,4.17897005119742,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0.919421224478927,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.316462387440884,1.90129757680748,1.70083439972035,0.209658645508376,1.12328631146495,0.901061357049038,0,0.855038231223746,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,16.5519170763889,17.587103467226,20.8743998014618,0,0,0,0,0,0,0,0,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.980771418680752,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.680593098960126,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0.380508304469197,0.790204397959275,0,0.492434012174795,3.04205544681009,1.18904929830983,0,0,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0.063497894292169,0.763976851116555,0,1.71072446022705,0.308482478109971,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.674921674654501,1.5476039091159,0.121499113316049,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0.151649117541648,13.1314053430685,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54400723580486,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.584580926518165,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0.151557396436479,0.803892390468535,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@SLC27A3 | |||
}} | }} |
Latest revision as of 07:22, 17 September 2015
Short description: | p5@SLC27A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC27A3_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 120bp_to_ENST00000468403_5end |
EntrezGene: | SLC27A3 |
HGNC: | 10997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.07e-32 | 5 |
common dendritic progenitor | 4.07e-32 | 5 |
conventional dendritic cell | 1.54e-21 | 8 |
dendritic cell | 1.11e-17 | 10 |
macrophage dendritic cell progenitor | 2.64e-14 | 61 |
granulocyte monocyte progenitor cell | 5.99e-13 | 67 |
monopoietic cell | 1.00e-11 | 59 |
monocyte | 1.00e-11 | 59 |
monoblast | 1.00e-11 | 59 |
promonocyte | 1.00e-11 | 59 |
myeloid lineage restricted progenitor cell | 2.07e-10 | 66 |
myeloid leukocyte | 1.75e-09 | 72 |
macrophage | 1.00e-08 | 6 |
myeloid cell | 1.15e-07 | 108 |
common myeloid progenitor | 1.15e-07 | 108 |
CD1a-positive Langerhans cell | 3.93e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.93e-07 | 2 |
endothelial cell of sinusoid | 4.42e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.42e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 8.59e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-11 | 76 |
bone element | 2.06e-10 | 82 |
skeletal element | 2.11e-09 | 90 |
immune system | 4.57e-09 | 93 |
hematopoietic system | 1.49e-08 | 98 |
blood island | 1.49e-08 | 98 |
skeletal system | 2.32e-08 | 100 |
hemolymphoid system | 1.15e-07 | 108 |
hepatic sinusoid | 4.42e-07 | 2 |
abdomen blood vessel | 4.42e-07 | 2 |
sinusoid | 4.42e-07 | 2 |
abdominal segment blood vessel | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.58e-07 | 2 |