FFCP PHASE1:Hg19::chr14:93117883..93117929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79890 | |EntrezGene=79890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18751 | |HGNC=18751 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TB24 | |UniProt=Q8TB24 | ||
|association_with_transcript=0bp_to_uc001yar.1,uc001yas.1_5end | |association_with_transcript=0bp_to_uc001yar.1,uc001yas.1_5end | ||
|cluster_id=chr14:93117883..93117929,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_2_at_RIN3_5end | |description=CAGE_peak_2_at_RIN3_5end | ||
|id=chr14:93117883..93117929,+ | |id=chr14:93117883..93117929,+ | ||
|ontology_enrichment_celltype=CL:0000860;4.43e-23;33!CL:0002057;4.43e-23;33!CL:0000473;1.81e-19;39!CL:0000234;1.81e-19;39!CL:0000576;2.69e-18;48!CL:0002087;6.55e-18;104!CL:0000766;1.32e-17;69!CL:0000791;2.34e-17;18!CL:0000789;2.34e-17;18!CL:0002419;2.34e-17;18!CL:0000738;2.11e-15;136!CL:0000542;5.70e-15;53!CL:0000763;1.76e-14;100!CL:0000084;1.10e-13;25!CL:0000988;1.78e-13;177!CL:0000625;3.61e-12;11!CL:0000945;4.21e-11;24!CL:0000236;4.05e-10;13!CL:0000094;7.96e-10;8!CL:0000624;3.20e-08;6 | |ontology_enrichment_celltype=CL:0000037!3.59e-64!172;CL:0000566!3.59e-64!172;CL:0002032!4.12e-60!165;CL:0000837!4.12e-60!165;CL:0000988!2.55e-59!182;CL:0000738!2.83e-54!140;CL:0002031!1.36e-43!124;CL:0002087!6.30e-42!119;CL:0000763!1.76e-37!112;CL:0000049!1.76e-37!112;CL:0000766!9.91e-28!76;CL:0000557!1.97e-23!71;CL:0000839!5.60e-23!70;CL:0002057!1.06e-21!42;CL:0002009!3.17e-20!65;CL:0002194!1.19e-19!63;CL:0000576!1.19e-19!63;CL:0000040!1.19e-19!63;CL:0000559!1.19e-19!63;CL:0000542!2.31e-19!53;CL:0000051!2.31e-19!53;CL:0000860!6.13e-19!45;CL:0000838!6.21e-19!52;CL:0000134!8.59e-13!358;CL:0002320!7.28e-12!365;CL:0000791!7.72e-12!18;CL:0000789!7.72e-12!18;CL:0002420!7.72e-12!18;CL:0002419!7.72e-12!18;CL:0000790!7.72e-12!18;CL:0000945!2.07e-09!24;CL:0000826!2.07e-09!24;CL:0000084!4.25e-09!25;CL:0000827!4.25e-09!25;CL:0000625!1.19e-08!11;CL:0000219!1.55e-08!390;CL:0000236!3.55e-08!14;CL:0000094!4.58e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;4.43e-23;33!CL:0002057;4.43e-23;33!CL:0000473;1.81e-19;39!CL:0000234;1.81e-19;39!CL:0000576;2.69e-18;48!CL:0002087;6.55e-18;104!CL:0000766;1.32e-17;69!CL:0000791;2.34e-17;18!CL:0000789;2.34e-17;18!CL:0002419;2.34e-17;18!CL:0000738;2.11e-15;136!CL:0000542;5.70e-15;53!CL:0000763;1.76e-14;100!CL:0000084;1.10e-13;25!CL:0000988;1.78e-13;177!CL:0000625;3.61e-12;11!CL:0000945;4.21e-11;24!CL:0000236;4.05e-10;13!CL:0000094;7.96e-10;8!CL:0000624;3.20e-08;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000037,1.03e-83,168;CL:0002032,3.89e-80,161;CL:0000837,3.89e-80,161;CL:0000988,3.03e-77,177;CL:0000738,1.91e-74,136;CL:0002031,8.11e-60,120;CL:0002087,9.65e-60,115;CL:0000763,1.48e-48,108;CL:0000049,1.48e-48,108;CL:0000766,3.21e-40,72;CL:0000557,1.45e-32,67;CL:0000839,6.35e-32,66;CL:0000860,9.97e-32,42;CL:0002057,9.97e-32,42;CL:0000473,1.46e-31,48;CL:0000234,1.46e-31,48;CL:0002194,5.00e-28,59;CL:0000576,5.00e-28,59;CL:0000040,5.00e-28,59;CL:0000559,5.00e-28,59;CL:0002009,8.83e-28,61;CL:0000542,1.12e-26,53;CL:0000051,1.12e-26,53;CL:0000838,4.86e-26,52;CL:0000134,2.60e-20,354;CL:0002320,3.56e-19,361;CL:0000791,2.36e-17,18;CL:0000789,2.36e-17,18;CL:0002420,2.36e-17,18;CL:0002419,2.36e-17,18;CL:0000790,2.36e-17,18;CL:0000219,1.11e-15,386;CL:0000084,1.07e-13,25;CL:0000827,1.07e-13,25;CL:0000625,3.60e-12,11;CL:0000945,5.04e-11,24;CL:0000826,5.04e-11,24;CL:0000048,1.18e-10,427;CL:0000236,1.65e-10,14;CL:0000034,1.68e-10,441;CL:0000723,4.80e-10,433;CL:0000094,8.36e-10,8;CL:0000624,3.24e-08,6;CL:0002393,1.11e-07,9;CL:0002397,1.11e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0000178;8.82e-11;15!UBERON:0000179;8.82e-11;15!UBERON:0000463;8.82e-11;15!UBERON:0002390;6.57e-08;32 | |ontology_enrichment_development_v019=CL:0002057;7.23e-23;42!CL:0000790;2.34e-17;18!CL:0000051;5.70e-15;53!CL:0000049;1.01e-13;108 | ||
|ontology_enrichment_disease=DOID:8692!5.32e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.61e-29!102;UBERON:0003061!4.61e-29!102;UBERON:0002193!3.16e-26!112;UBERON:0002371!1.98e-19!80;UBERON:0001474!2.78e-17!86;UBERON:0002405!8.58e-14!115;UBERON:0004765!2.50e-13!101;UBERON:0001434!2.50e-13!101;UBERON:0002384!4.14e-11!375;UBERON:0007023!2.38e-10!115;UBERON:0000178!5.83e-09!15;UBERON:0000179!5.83e-09!15;UBERON:0000463!5.83e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.82e-11;15!UBERON:0000179;8.82e-11;15!UBERON:0000463;8.82e-11;15!UBERON:0002390;6.57e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.41e-41,98;UBERON:0003061,4.41e-41,98;UBERON:0002193,9.62e-39,108;UBERON:0002405,3.29e-29,93;UBERON:0002371,8.27e-28,76;UBERON:0001474,1.98e-24,82;UBERON:0004765,1.14e-20,90;UBERON:0002384,3.99e-18,371;UBERON:0001434,7.05e-17,100;UBERON:0000178,8.96e-11,15;UBERON:0000179,8.96e-11,15;UBERON:0000463,8.96e-11,15;UBERON:0003081,1.60e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,13.5251728173874,15.0244078693401,16.7653964198137,18.0947567350496,7.67658796194425,12.3852898652861,0,0,0.369754010166788,0,0.568676929949686,8.22081230137572,17.1738576644882,24.4664225913573,18.2289131401316,0.447830948479849,2.59114932815184,2.83333124397605,26.0262847415421,24.5619363397726,33.9617685662943,12.7835970298127,9.04569353648017,4.64559556342655,5.46615545412086,9.73410684810582,4.49316236788312,6.89491361473237,12.9096936716765,8.12558919566051,19.2007186333457,8.46009065179322,5.39336362668203,8.26426509401437,8.66508373105453,7.67204550958849,22.4298884126967,17.5528018707036,14.4916415181116,2.61188314765726,1.70215567407342,3.73693349397345,8.29120595347253,13.037072960505,4.56096573880745,2.42159801053347,6.2607198117886,3.16462387440884,5.91514801673437,5.74031609905618,6.9187353017764,18.1972382457322,19.9735267479203,32.145117339416,3.42015292489498,1.9891667719909,3.65328307529268,29.9193615584249,26.2146533405823,31.1328238852244,22.6167017960249,38.8384107424932,29.8871268776331,37.0185128759523,23.8513438633841,48.3831023743031,28.1873850898051,50.8423393406554,15.8605594294831,7.8471198817415,4.47752944117631,93.8305603442984,56.5935498358797,37.2138713189112,74.8995499350238,67.1399869265196,62.4951103569848,56.4997512382943,34.8714730050593,41.2448270464772,48.515922913813,92.6149214076353,37.5307566796228,50.7231455483525,32.8875809207352,30.1221519386575,71.581362176558,111.808068624194,119.590750156102,106.626234281076,23.9082713091865,22.2267886289114,24.0539211837841,40.9891901071595,36.316457232947,31.2520057851081,17.1081368000707,50.8943902482872,57.9779348529515,38.7285252312272,33.8591470422944,19.7070719261051,17.1365731741023,6.41856469880418,35.337154547403,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0.351339142772504,1.24430121722827,0,0.370784442784429,0.324547393654683,1.21890816109487,1.06366368415092,1.43094374583205,1.14398982156026,0.74291500265913,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,73.7970337641954,58.1670396222488,0,0.496971951695318,0.12663051166458,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,1.82032272387605,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,1.18904929830983,0,0,0.141775097242386,0,0,0,48.2809973138025,17.0813961985659,12.6470150479871,21.9062329193781,9.84690980725764,0.126995788584338,1.14596527667483,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,4.86495122564762,1.00451418286425,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0,25.4169680660486,17.4658335636209,25.4119211833902,0.254094624222463,0,0,0,0,83.8887866820844,86.7568231691672,113.96426619491,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,69.4740567772902,36.8871283399835,41.8372026589502,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,1.3071772551245,0,0,0.325378394664303,1.23649213977267,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.426133137080504,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,1.34060455107157,0,0.564862804660675,0,0,0,0,35.0138850370197,45.1135952214001,58.6736602789387,55.269771906207,52.6543709550329,35.0175588044067,32.4018862342869,49.1737609302448,0.106824071127473,0,0,5.38829207864584,0,0.142283686696828,0,0.59873811429845,28.725805519855,23.9191148477988,0.973865820823666,12.3550758369922,0.228234679033192,1.25343916618419,20.0507581672054,33.6890637825191,2.24823305145179,2.01799707191048,12.7753871307098,5.839590860848,0.921722292925374,0.223676107892416,0,2.54004524022652,0,19.693983831634,14.0636952807511,1.99843180798692,12.6888304579065,0,1.31857361344705,0,33.544458667521,0,0,0.593929361665277,0,0,0.562677665642051,0.222617410045812,0,0,0.996239941255349,11.8802083678393,0,0,6.15424027305347,0,0,0,4.09257896181497,3.05794557474494,19.1586473877552,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,3.54296554325536,0.241192877250816,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.179515288819544,0,0,0.0915975934018623,1.5991043280559,0,0.627921025580099,5.48498550270516,0,0,0,0,26.860281847684,0.21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| ||
|short_description=p2@RIN3 | |short_description=p2@RIN3 | ||
}} | }} |
Latest revision as of 14:55, 16 September 2015
Short description: | p2@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIN3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_uc001yar.1, uc001yas.1_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.41e-41 | 98 |
blood island | 4.41e-41 | 98 |
hemolymphoid system | 9.62e-39 | 108 |
immune system | 3.29e-29 | 93 |
bone marrow | 8.27e-28 | 76 |
bone element | 1.98e-24 | 82 |
skeletal element | 1.14e-20 | 90 |
connective tissue | 3.99e-18 | 371 |
skeletal system | 7.05e-17 | 100 |
blood | 8.96e-11 | 15 |
haemolymphatic fluid | 8.96e-11 | 15 |
organism substance | 8.96e-11 | 15 |
lateral plate mesoderm | 1.60e-10 | 203 |