FFCP PHASE1:Hg19::chr5:56469967..56469978,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65056 | |EntrezGene=65056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29520 | |HGNC=29520 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000506184_5end | |association_with_transcript=23bp_to_ENST00000506184_5end | ||
|cluster_id=chr5:56469967..56469978,+ | |||
|description=CAGE_peak_7_at_GPBP1_5end | |description=CAGE_peak_7_at_GPBP1_5end | ||
|id=chr5:56469967..56469978,+ | |id=chr5:56469967..56469978,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.62e-19!140;CL:0000037!5.63e-16!172;CL:0000566!5.63e-16!172;CL:0000988!4.04e-15!182;CL:0002032!5.26e-14!165;CL:0000837!5.26e-14!165;CL:0002031!7.54e-12!124;CL:0000766!6.68e-11!76;CL:0002057!3.20e-10!42;CL:0000860!7.47e-10!45;CL:0002087!8.01e-10!119;CL:0000763!1.22e-09!112;CL:0000049!1.22e-09!112;CL:0000557!1.27e-08!71;CL:0000094!3.46e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.62e-19!140;CL:0000037!5.63e-16!172;CL:0000566!5.63e-16!172;CL:0000988!4.04e-15!182;CL:0002032!5.26e-14!165;CL:0000837!5.26e-14!165;CL:0002031!7.54e-12!124;CL:0000766!6.68e-11!76;CL:0002057!3.20e-10!42;CL:0000860!7.47e-10!45;CL:0002087!8.01e-10!119;CL:0000763!1.22e-09!112;CL:0000049!1.22e-09!112;CL:0000557!1.27e-08!71;CL:0000094!3.46e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000451;9.22e-18;10!CL:0000453;4.32e-17;5!CL:0000094;3.38e-14;8!CL:0000081;1.45e-13;11!CL:0000990;9.74e-13;8!CL:0000775;2.00e-10;3!CL:0000097;6.45e-10;5!CL:0000784;1.16e-09;3!CL:0000766;3.17e-08;69!CL:0001014;6.56e-08;2!CL:0001016;6.56e-08;2!CL:0000771;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.19e-29,136;CL:0000037,7.84e-23,168;CL:0000988,1.71e-22,177;CL:0002032,3.91e-20,161;CL:0000837,3.91e-20,161;CL:0000451,6.18e-18,10;CL:0000766,1.34e-17,72;CL:0000763,1.64e-17,108;CL:0000049,1.64e-17,108;CL:0000453,3.96e-17,5;CL:0002031,1.42e-14,120;CL:0000094,3.45e-14,8;CL:0000557,5.25e-14,67;CL:0000081,1.23e-13,11;CL:0000990,8.86e-13,8;CL:0000775,1.66e-10,3;CL:0000097,5.18e-10,5;CL:0002028,5.18e-10,5;CL:0000784,7.33e-10,3;CL:0000839,7.45e-10,66;CL:0002087,1.35e-09,115;CL:0000860,5.77e-09,42;CL:0002057,5.77e-09,42;CL:0002009,1.58e-08,61;CL:0001014,6.27e-08,2;CL:0001016,6.27e-08,2;CL:0000771,9.87e-08,2;CL:0000134,1.27e-07,354;CL:0000473,1.69e-07,48;CL:0000234,1.69e-07,48;CL:0002320,2.85e-07,361;CL:0000219,3.86e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.37e-07!86;UBERON:0002390!2.12e-07!102;UBERON:0003061!2.12e-07!102;UBERON:0002371!3.40e-07!80 | |ontology_enrichment_uberon=UBERON:0001474!1.37e-07!86;UBERON:0002390!2.12e-07!102;UBERON:0003061!2.12e-07!102;UBERON:0002371!3.40e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0002784;8.34e-08;4!UBERON:0001905;1.77e-07;2!UBERON:0002757;1.77e-07;2!UBERON:0010134;1.77e-07;2!UBERON:0005408;1.77e-07;2!UBERON:0001899;1.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.29e-12,76;UBERON:0002390,3.01e-11,98;UBERON:0003061,3.01e-11,98;UBERON:0001474,1.54e-10,82;UBERON:0002193,1.10e-09,108;UBERON:0004765,3.57e-09,90;UBERON:0002405,1.01e-08,93;UBERON:0001434,8.73e-08,100;UBERON:0002784,1.05e-07,4;UBERON:0001905,2.48e-07,2;UBERON:0002757,2.48e-07,2;UBERON:0010134,2.48e-07,2;UBERON:0005408,2.48e-07,2;UBERON:0001899,2.48e-07,2;UBERON:0002384,8.52e-07,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.547497700291537,0.251085279189606,0.687720651731561,0.492603536699674,0.314843125254717,0.786728553697808,0.767658796194425,2.01260960310899,0,0,0,0.542270404062111,0.426507697462265,0.293600439334847,2.21598163412751,2.20598892217156,1.73608696572681,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,2.05583944010913,0.619412741790207,0.863077176966451,0.256160706529101,1.18241114944293,1.03423704220986,0.645484683583826,4.06279459783025,0.941211697713023,0,0.449446968890169,0.612167784741805,0.962787081228281,1.91801137739712,0,0,0,2.32167390902867,2.8369261234557,0.622822248995575,0.502497330513487,1.0429658368404,1.08594422352558,0.605399502633369,2.20966581592539,0.949387162322653,0,0,0.209658645508376,0.22465726229299,0.300353785683013,0.32145117339416,0,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0.569212969109448,5.87237189370939,2.29363936875137,1.32171328579026,2.80254281490768,0,1.96709770113833,2.35806457649499,1.02800749499755,0,0.32592226663359,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0.869409257205157,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0,0,2.62088766192152,2.94184215361858,1.44824403882799,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0,1.43094374583205,4.57595928624102,1.85728750664782,0.198762407366705,0,0,0,0,0.825354125820202,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.225222960966644,0,0,0,3.9534125230819,3.87780264148325,0,0,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0,0.169560592310488,0.773043412653187,0,0,0.121973706129595,0.927708378250397,0.69716365721711,0.10366105501537,0,1.82488679537915,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.871901815541886,0,1.47798971368783,0.264145302039678,2.48793738648926,3.02651902175619,1.64115163454294,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,2.56139988262505,0.862510299438069,1.41177339907723,0.254094624222463,2.60279707715243,0,0.502548796003046,1.27587750330633,2.24702107184155,2.99161459204025,7.0450637284126,0,0,0,0.207970861530807,0.178428988797162,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.232420756919918,1.0877350463246,0.40101294060657,0.460404944679482,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.330037999682352,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,1.06824071127473,0,0.490080431962063,0,0.144269212976445,0.355709216742071,0,0,0,0,0,0,0,0.156679895773023,0,0.338583555603207,0.481764225311099,0.201799707191048,0.425846237690326,0,0.614481528616916,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0.23874448473769,0,0,0,0,0.111308705022906,0,1.68900326502395,0,0.828851746593443,0,0.20453736500431,0.123084805461069,0,0.629078458031288,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0.139423744278603,0,0.227884111694002,0,0.179515288819544,0,0.31900115973192,0,0,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0,0.37950746544837,0,0,0,0.989471500037586,0.216388639742091,0,0.176915129006678,0,2.96521128680622,0.370691816839509,0.104421949505455,0,0,0.234264445725339,0.547364367646998,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0,3.75808548536231,0.518440956986236,0,0,0.313932918407225,0,1.13843818411917,0.138674673013139,0.520679215005393,0.587954384486266,0.261177619741208,0,0,0,0.219267951258557,0.164230914106418,0.193978032976839,0.617792886840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| ||
|short_description=p7@GPBP1 | |short_description=p7@GPBP1 | ||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p7@GPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GPBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000506184_5end |
EntrezGene: | GPBP1 |
HGNC: | 29520 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.29e-12 | 76 |
hematopoietic system | 3.01e-11 | 98 |
blood island | 3.01e-11 | 98 |
bone element | 1.54e-10 | 82 |
hemolymphoid system | 1.10e-09 | 108 |
skeletal element | 3.57e-09 | 90 |
immune system | 1.01e-08 | 93 |
skeletal system | 8.73e-08 | 100 |
regional part of diencephalon | 1.05e-07 | 4 |
pineal body | 2.48e-07 | 2 |
regional part of epithalamus | 2.48e-07 | 2 |
secretory circumventricular organ | 2.48e-07 | 2 |
circumventricular organ | 2.48e-07 | 2 |
epithalamus | 2.48e-07 | 2 |
connective tissue | 8.52e-07 | 371 |