FFCP PHASE1:Hg19::chr18:12059774..12059782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:12059774..12059782,- | |||
|description=CAGE_peak_at_chr18:12059774..12059782,- | |description=CAGE_peak_at_chr18:12059774..12059782,- | ||
|id=chr18:12059774..12059782,- | |id=chr18:12059774..12059782,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.67e-23;1!CL:0000159;2.74e-12;2!CL:0002253;2.74e-12;2!CL:0002563;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.62e-23,1;CL:0000159,2.32e-12,2;CL:0002253,3.24e-12,2;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!7.60e-10!10 | |ontology_enrichment_disease=DOID:171!7.60e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:3030;3.67e-23;1!DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.62e-23,1;DOID:5409,6.87e-07,4 | |||
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| ||
|short_description=p@chr18:12059774..12059782,- | |short_description=p@chr18:12059774..12059782,- | ||
}} | }} |
Latest revision as of 23:39, 25 July 2015
Short description: | p@chr18:12059774..12059782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12059774..12059782, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.62e-23 | 1 |
seromucus secreting cell | 2.32e-12 | 2 |
epithelial cell of large intestine | 3.24e-12 | 2 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.10e-23 | 1 |
right lung lobe | 2.10e-23 | 1 |
lower lobe of lung | 2.10e-23 | 1 |
lobe of lung | 2.10e-23 | 1 |
right lung | 2.10e-23 | 1 |
middle temporal gyrus | 2.90e-12 | 2 |
neocortex | 4.58e-10 | 20 |
regional part of cerebral cortex | 3.03e-09 | 22 |
cerebral cortex | 3.01e-08 | 25 |
pallium | 3.01e-08 | 25 |
rectum | 9.63e-07 | 4 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.62e-23 | 1 |
lung small cell carcinoma | 6.87e-07 | 4 |