FFCP PHASE1:Hg19::chr1:204165736..204165747,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:204165736..204165747,-
|short_description=p3@KISS1
|description=CAGE_peak_3_at_KISS1_5end
|association_with_transcript=-117bp_to_NM_002256,uc001har.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3814 | |EntrezGene=3814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6341 | |HGNC=6341 | ||
|TSSclassifier=strong | |||
|UniProt=Q15726 | |UniProt=Q15726 | ||
|association_with_transcript=-117bp_to_NM_002256,uc001har.2_5end | |||
|cluster_id=chr1:204165736..204165747,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_KISS1_5end | |||
|id=chr1:204165736..204165747,- | |||
|ontology_enrichment_celltype=CL:0000188!1.42e-13!9;CL:0002536!5.16e-09!2;CL:1000449!7.02e-08!16;CL:1000507!1.60e-07!12;CL:1000494!1.60e-07!12;CL:0002681!4.36e-07!13;CL:0002584!4.36e-07!13;CL:1000497!6.30e-07!18;CL:0002518!6.30e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002536;2.21e-15;2!CL:0002681;1.94e-10;12!CL:0002584;1.94e-10;12!CL:1000449;1.53e-08;15!CL:1000497;1.21e-07;17!CL:0002518;1.21e-07;17!CL:0002188;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,2.05e-15,2;CL:0002681,1.94e-10,12;CL:0002584,1.94e-10,12;CL:1000449,1.53e-08,15;CL:1000497,1.21e-07,17;CL:0002518,1.21e-07,17;CL:0002188,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1!UBERON:0007123;6.21e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;2.73e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.20e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.68e-09!14;UBERON:0000158!1.68e-09!14;UBERON:0003124!4.46e-09!7;UBERON:0004211!7.02e-08!16;UBERON:0001285!7.02e-08!16;UBERON:0007684!7.02e-08!16;UBERON:0003220!7.02e-08!16;UBERON:0004208!7.02e-08!16;UBERON:0009773!1.60e-07!12;UBERON:0001231!1.60e-07!12;UBERON:0004810!1.60e-07!12;UBERON:0006555!2.24e-07!17;UBERON:0005103!2.24e-07!17;UBERON:0000083!2.24e-07!17;UBERON:0009201!2.24e-07!17;UBERON:0004819!2.24e-07!17;UBERON:0006553!2.24e-07!17;UBERON:0003074!2.24e-07!17;UBERON:0003060!2.24e-07!17;UBERON:0001225!4.36e-07!13;UBERON:0008987!4.36e-07!13;UBERON:0000080!6.30e-07!18;UBERON:0002120!6.30e-07!18;UBERON:0004875!6.30e-07!18;UBERON:0005721!6.30e-07!18;UBERON:0005754!6.30e-07!18;UBERON:0007297!6.30e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;1.94e-10;12!UBERON:0008987;1.94e-10;12!UBERON:0001851;1.53e-08;15!UBERON:0006555;1.53e-08;15!UBERON:0000353;1.53e-08;15!UBERON:0004819;1.53e-08;15!UBERON:0001285;1.53e-08;15!UBERON:0007684;1.53e-08;15!UBERON:0001987;1.70e-08;4!UBERON:0002046;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,1.94e-10,12;UBERON:0008987,1.94e-10,12;UBERON:0005631,4.04e-09,14;UBERON:0000158,4.04e-09,14;UBERON:0001851,1.53e-08,15;UBERON:0004211,1.53e-08,15;UBERON:0009773,1.53e-08,15;UBERON:0000353,1.53e-08,15;UBERON:0001231,1.53e-08,15;UBERON:0001285,1.53e-08,15;UBERON:0007684,1.53e-08,15;UBERON:0004208,1.53e-08,15;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0006555,4.58e-08,16;UBERON:0004819,4.58e-08,16;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
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| ||
|short_description=p3@KISS1 | |||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p3@KISS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KISS1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -117bp_to_NM_002256, uc001har.2_5end |
EntrezGene: | KISS1 |
HGNC: | 6341 |
UniProt: | Q15726 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 2.05e-15 | 2 |
kidney cortical cell | 1.94e-10 | 12 |
renal cortical epithelial cell | 1.94e-10 | 12 |
epithelial cell of nephron | 1.53e-08 | 15 |
kidney cell | 1.21e-07 | 17 |
kidney epithelial cell | 1.21e-07 | 17 |
glomerular endothelial cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 1.94e-10 | 12 |
renal parenchyma | 1.94e-10 | 12 |
extraembryonic membrane | 4.04e-09 | 14 |
membranous layer | 4.04e-09 | 14 |
cortex | 1.53e-08 | 15 |
nephron epithelium | 1.53e-08 | 15 |
renal tubule | 1.53e-08 | 15 |
parenchyma | 1.53e-08 | 15 |
nephron tubule | 1.53e-08 | 15 |
nephron | 1.53e-08 | 15 |
uriniferous tubule | 1.53e-08 | 15 |
nephrogenic mesenchyme | 1.53e-08 | 15 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
excretory tube | 4.58e-08 | 16 |
kidney epithelium | 4.58e-08 | 16 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.20e-29 | 1 |