FFCP PHASE1:Hg19::chr12:65174519..65174584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23329 | |EntrezGene=23329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29164 | |HGNC=29164 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2I9 | |UniProt=Q9Y2I9 | ||
|association_with_transcript=-4bp_to_ENST00000229088_5end | |association_with_transcript=-4bp_to_ENST00000229088_5end | ||
|cluster_id=chr12:65174519..65174584,+ | |||
|description=CAGE_peak_2_at_TBC1D30_5end | |description=CAGE_peak_2_at_TBC1D30_5end | ||
|id=chr12:65174519..65174584,+ | |id=chr12:65174519..65174584,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.00e-25!76;CL:0000860!1.23e-21!45;CL:0000557!9.08e-21!71;CL:0002057!2.54e-20!42;CL:0002194!5.49e-20!63;CL:0000576!5.49e-20!63;CL:0000040!5.49e-20!63;CL:0000559!5.49e-20!63;CL:0000839!7.95e-20!70;CL:0002009!2.97e-19!65;CL:0000115!4.93e-15!35;CL:0002139!1.59e-13!24;CL:0000763!5.71e-13!112;CL:0000049!5.71e-13!112;CL:0002078!3.08e-12!44;CL:0000071!1.92e-11!18;CL:0002546!1.92e-11!18;CL:0000066!6.17e-11!254;CL:0000213!6.56e-07!57;CL:0000215!6.56e-07!57 | |ontology_enrichment_celltype=CL:0000766!3.00e-25!76;CL:0000860!1.23e-21!45;CL:0000557!9.08e-21!71;CL:0002057!2.54e-20!42;CL:0002194!5.49e-20!63;CL:0000576!5.49e-20!63;CL:0000040!5.49e-20!63;CL:0000559!5.49e-20!63;CL:0000839!7.95e-20!70;CL:0002009!2.97e-19!65;CL:0000115!4.93e-15!35;CL:0002139!1.59e-13!24;CL:0000763!5.71e-13!112;CL:0000049!5.71e-13!112;CL:0002078!3.08e-12!44;CL:0000071!1.92e-11!18;CL:0002546!1.92e-11!18;CL:0000066!6.17e-11!254;CL:0000213!6.56e-07!57;CL:0000215!6.56e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.16e-17;33!CL:0002057;5.16e-17;33!CL:0000473;1.96e-16;39!CL:0000234;1.96e-16;39!CL:0002139;4.63e-16;24!CL:0000115;4.86e-15;36!CL:0000071;3.28e-14;18!CL:0000576;9.20e-13;48!CL:0000766;8.67e-12;69!CL:0002078;3.67e-09;45!CL:1000413;3.38e-07;9 | |ontology_enrichment_celltype_v019=CL:0000860;5.16e-17;33!CL:0002057;5.16e-17;33!CL:0000473;1.96e-16;39!CL:0000234;1.96e-16;39!CL:0002139;4.63e-16;24!CL:0000115;4.86e-15;36!CL:0000071;3.28e-14;18!CL:0000576;9.20e-13;48!CL:0000766;8.67e-12;69!CL:0002078;3.67e-09;45!CL:1000413;3.38e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.28e-25,72;CL:0000473,1.08e-23,48;CL:0000234,1.08e-23,48;CL:0000860,1.95e-21,42;CL:0002057,1.95e-21,42;CL:0000557,1.22e-19,67;CL:0000839,2.61e-19,66;CL:0002194,1.94e-18,59;CL:0000576,1.94e-18,59;CL:0000040,1.94e-18,59;CL:0000559,1.94e-18,59;CL:0000115,4.76e-18,36;CL:0002009,2.41e-17,61;CL:0002139,5.18e-16,24;CL:0000071,3.33e-14,18;CL:0002546,3.33e-14,18;CL:0002078,3.54e-14,45;CL:0000763,3.12e-13,108;CL:0000049,3.12e-13,108;CL:0000213,4.89e-08,58;CL:0000215,4.89e-08,58;CL:0000066,7.42e-08,253;CL:1000413,3.93e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-15;42!CL:0002546;3.28e-14;18!UBERON:0008947;7.88e-10;29 | |ontology_enrichment_development_v019=CL:0002057;1.59e-15;42!CL:0002546;3.28e-14;18!UBERON:0008947;7.88e-10;29 | ||
|ontology_enrichment_disease=DOID:305!1.10e-14!106;DOID:0050687!9.84e-10!143 | |ontology_enrichment_disease=DOID:305!1.10e-14!106;DOID:0050687!9.84e-10!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.60e-11,106;DOID:0050687,3.87e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.60e-16!86;UBERON:0002371!2.76e-15!80;UBERON:0002193!7.74e-15!112;UBERON:0007023!1.78e-14!115;UBERON:0002405!2.13e-14!115;UBERON:0002390!2.92e-13!102;UBERON:0003061!2.92e-13!102;UBERON:0000467!1.33e-11!625;UBERON:0000062!1.47e-11!511;UBERON:0001986!1.92e-11!18;UBERON:0004638!1.92e-11!18;UBERON:0004852!1.92e-11!18;UBERON:0000480!2.01e-11!626;UBERON:0000922!2.54e-11!612;UBERON:0000468!7.45e-11!659;UBERON:0002050!1.05e-10!605;UBERON:0005423!1.05e-10!605;UBERON:0000923!1.54e-10!604;UBERON:0005291!1.54e-10!604;UBERON:0006598!1.54e-10!604;UBERON:0002532!1.54e-10!604;UBERON:0004765!1.62e-10!101;UBERON:0001434!1.62e-10!101;UBERON:0000487!2.16e-10!22;UBERON:0006914!1.37e-08!25;UBERON:0004921!3.41e-08!129;UBERON:0004185!3.41e-08!129;UBERON:0000926!2.77e-07!448;UBERON:0004120!2.77e-07!448;UBERON:0006603!2.77e-07!448;UBERON:0001007!7.83e-07!155;UBERON:0001555!7.83e-07!155;UBERON:0007026!7.83e-07!155 | |ontology_enrichment_uberon=UBERON:0001474!5.60e-16!86;UBERON:0002371!2.76e-15!80;UBERON:0002193!7.74e-15!112;UBERON:0007023!1.78e-14!115;UBERON:0002405!2.13e-14!115;UBERON:0002390!2.92e-13!102;UBERON:0003061!2.92e-13!102;UBERON:0000467!1.33e-11!625;UBERON:0000062!1.47e-11!511;UBERON:0001986!1.92e-11!18;UBERON:0004638!1.92e-11!18;UBERON:0004852!1.92e-11!18;UBERON:0000480!2.01e-11!626;UBERON:0000922!2.54e-11!612;UBERON:0000468!7.45e-11!659;UBERON:0002050!1.05e-10!605;UBERON:0005423!1.05e-10!605;UBERON:0000923!1.54e-10!604;UBERON:0005291!1.54e-10!604;UBERON:0006598!1.54e-10!604;UBERON:0002532!1.54e-10!604;UBERON:0004765!1.62e-10!101;UBERON:0001434!1.62e-10!101;UBERON:0000487!2.16e-10!22;UBERON:0006914!1.37e-08!25;UBERON:0004921!3.41e-08!129;UBERON:0004185!3.41e-08!129;UBERON:0000926!2.77e-07!448;UBERON:0004120!2.77e-07!448;UBERON:0006603!2.77e-07!448;UBERON:0001007!7.83e-07!155;UBERON:0001555!7.83e-07!155;UBERON:0007026!7.83e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.28e-14;18!UBERON:0001986;3.28e-14;18!UBERON:0004852;3.28e-14;18!UBERON:0000487;1.32e-11;22!UBERON:0006914;1.90e-09;25!UBERON:0003915;3.38e-07;9!UBERON:0004700;3.38e-07;9!UBERON:0001917;3.38e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.28e-14;18!UBERON:0001986;3.28e-14;18!UBERON:0004852;3.28e-14;18!UBERON:0000487;1.32e-11;22!UBERON:0006914;1.90e-09;25!UBERON:0003915;3.38e-07;9!UBERON:0004700;3.38e-07;9!UBERON:0001917;3.38e-07;9 | ||
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| ||
|short_description=p2@TBC1D30 | |short_description=p2@TBC1D30 | ||
}} | }} |
Latest revision as of 21:42, 19 September 2015
Short description: | p2@TBC1D30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBC1D30_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000229088_5end |
EntrezGene: | TBC1D30 |
HGNC: | 29164 |
UniProt: | Q9Y2I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.28e-25 | 72 |
defensive cell | 1.08e-23 | 48 |
phagocyte | 1.08e-23 | 48 |
classical monocyte | 1.95e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-21 | 42 |
granulocyte monocyte progenitor cell | 1.22e-19 | 67 |
myeloid lineage restricted progenitor cell | 2.61e-19 | 66 |
monopoietic cell | 1.94e-18 | 59 |
monocyte | 1.94e-18 | 59 |
monoblast | 1.94e-18 | 59 |
promonocyte | 1.94e-18 | 59 |
endothelial cell | 4.76e-18 | 36 |
macrophage dendritic cell progenitor | 2.41e-17 | 61 |
endothelial cell of vascular tree | 5.18e-16 | 24 |
blood vessel endothelial cell | 3.33e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.33e-14 | 18 |
meso-epithelial cell | 3.54e-14 | 45 |
myeloid cell | 3.12e-13 | 108 |
common myeloid progenitor | 3.12e-13 | 108 |
lining cell | 4.89e-08 | 58 |
barrier cell | 4.89e-08 | 58 |
epithelial cell | 7.42e-08 | 253 |
endothelial cell of artery | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.26e-16 | 93 |
bone element | 1.83e-15 | 82 |
bone marrow | 2.17e-15 | 76 |
blood vessel endothelium | 3.33e-14 | 18 |
endothelium | 3.33e-14 | 18 |
cardiovascular system endothelium | 3.33e-14 | 18 |
skeletal element | 1.17e-12 | 90 |
hemolymphoid system | 3.75e-12 | 108 |
simple squamous epithelium | 1.16e-11 | 22 |
hematopoietic system | 2.16e-10 | 98 |
blood island | 2.16e-10 | 98 |
skeletal system | 6.98e-10 | 100 |
squamous epithelium | 1.69e-09 | 25 |
subdivision of digestive tract | 2.94e-08 | 118 |
lateral plate mesoderm | 1.33e-07 | 203 |
endothelial tube | 3.93e-07 | 9 |
arterial system endothelium | 3.93e-07 | 9 |
endothelium of artery | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.60e-11 | 106 |
cell type cancer | 3.87e-07 | 143 |