FFCP PHASE1:Hg19::chr1:224804004..224804029,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:224804004..224804029,+
|short_description=p1@CNIH3
|description=CAGE_peak_1_at_CNIH3_5end
|association_with_transcript=9bp_to_ENST00000272133_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149111 | |EntrezGene=149111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26802 | |HGNC=26802 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TBE1 | |UniProt=Q8TBE1 | ||
|association_with_transcript=9bp_to_ENST00000272133_5end | |||
|cluster_id=chr1:224804004..224804029,+ | |||
|description=CAGE_peak_1_at_CNIH3_5end | |||
|id=chr1:224804004..224804029,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.07e-31!180;CL:0000359!2.10e-16!32;CL:0000057!6.89e-14!75;CL:0000192!3.67e-13!42;CL:0000514!3.67e-13!42;CL:0000187!1.89e-12!54;CL:0000393!2.89e-12!60;CL:0000211!2.89e-12!60;CL:0000183!4.51e-12!59;CL:0000680!1.23e-11!57;CL:0000056!1.23e-11!57;CL:0000355!1.23e-11!57;CL:0002620!1.63e-09!23;CL:0002539!8.18e-09!10;CL:0000333!4.54e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.30e-19;32!CL:0002539;2.52e-12;10!CL:0000192;1.99e-10;43!CL:0002551;1.48e-08;6!CL:0002620;5.72e-08;23!CL:0000057;9.74e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.32e-20,32;CL:0000192,7.08e-14,43;CL:0000514,7.08e-14,43;CL:0000057,1.13e-12,76;CL:0002539,2.17e-12,10;CL:0000187,9.75e-11,55;CL:0000680,1.04e-09,58;CL:0000056,1.04e-09,58;CL:0000355,1.04e-09,58;CL:0000393,1.59e-09,61;CL:0000211,1.59e-09,61;CL:0002551,1.49e-08,6;CL:0002620,7.07e-08,23;CL:0000048,1.39e-07,427;CL:0000723,4.34e-07,433;CL:0000034,9.68e-07,441;CL:0000333,9.92e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!6.72e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.39e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.86e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.71e-15!83;UBERON:0002329!2.71e-15!83;UBERON:0003077!2.71e-15!83;UBERON:0003059!2.71e-15!83;UBERON:0007282!2.71e-15!83;UBERON:0009618!2.71e-15!83;UBERON:0007285!2.71e-15!83;UBERON:0004290!2.67e-14!70;UBERON:0001637!5.10e-14!42;UBERON:0003509!5.10e-14!42;UBERON:0004572!5.10e-14!42;UBERON:0004573!4.91e-12!33;UBERON:0004571!4.91e-12!33;UBERON:0000475!7.20e-11!365;UBERON:0000486!6.74e-10!82;UBERON:0001134!7.93e-10!61;UBERON:0002036!7.93e-10!61;UBERON:0003082!7.93e-10!61;UBERON:0002385!1.89e-09!63;UBERON:0001015!1.89e-09!63;UBERON:0000383!1.89e-09!63;UBERON:0004237!8.18e-09!10;UBERON:0004695!8.18e-09!10;UBERON:0002111!8.18e-09!10;UBERON:0004178!8.18e-09!10;UBERON:0002199!2.92e-08!45;UBERON:0002416!2.92e-08!45;UBERON:0001981!6.16e-08!60;UBERON:0007500!6.16e-08!60;UBERON:0004537!6.16e-08!60;UBERON:0006965!6.16e-08!60;UBERON:0000033!6.56e-08!123;UBERON:0002049!1.07e-07!79;UBERON:0007798!1.07e-07!79;UBERON:0002097!1.19e-07!40;UBERON:0004121!1.86e-07!169;UBERON:0005743!1.90e-07!86;UBERON:0002067!2.88e-07!9;UBERON:0004016!2.88e-07!9;UBERON:0010083!2.88e-07!9;UBERON:0000956!3.59e-07!25;UBERON:0000203!3.59e-07!25;UBERON:0000924!3.68e-07!173;UBERON:0006601!3.68e-07!173;UBERON:0000153!3.89e-07!129;UBERON:0007811!3.89e-07!129;UBERON:0001869!4.54e-07!32;UBERON:0001017!5.80e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.43e-15;33!UBERON:0004571;2.43e-15;33!UBERON:0001637;1.25e-12;42!UBERON:0003509;1.25e-12;42!UBERON:0004572;1.25e-12;42!UBERON:0004237;2.52e-12;10!UBERON:0004695;2.52e-12;10!UBERON:0002111;2.52e-12;10!UBERON:0004178;2.52e-12;10!UBERON:0000947;1.05e-10;21!UBERON:0010191;1.05e-10;21!UBERON:0002067;1.19e-08;9!UBERON:0000956;1.24e-07;25!UBERON:0000203;1.24e-07;25!UBERON:0000992;1.83e-07;13!UBERON:0001135;3.61e-07;15!UBERON:0001950;4.41e-07;20!UBERON:0007500;8.12e-07;56!UBERON:0001981;8.12e-07;56!UBERON:0004537;8.12e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.27e-19,42;UBERON:0003509,3.27e-19,42;UBERON:0004572,3.27e-19,42;UBERON:0004573,3.14e-17,33;UBERON:0004571,3.14e-17,33;UBERON:0003077,5.32e-14,72;UBERON:0007285,5.32e-14,72;UBERON:0007524,1.23e-13,73;UBERON:0002329,1.96e-13,71;UBERON:0003059,1.96e-13,71;UBERON:0007282,1.96e-13,71;UBERON:0004290,1.96e-13,71;UBERON:0009618,1.96e-13,71;UBERON:0004237,2.17e-12,10;UBERON:0004695,2.17e-12,10;UBERON:0002111,2.17e-12,10;UBERON:0004178,2.17e-12,10;UBERON:0007500,2.58e-12,59;UBERON:0001981,2.58e-12,59;UBERON:0004537,2.58e-12,59;UBERON:0006965,2.58e-12,59;UBERON:0007503,3.76e-11,78;UBERON:0000947,8.93e-11,21;UBERON:0010191,8.93e-11,21;UBERON:0004872,5.89e-10,83;UBERON:0000486,8.64e-10,83;UBERON:0000055,2.39e-09,68;UBERON:0002049,1.06e-08,78;UBERON:0007798,1.06e-08,78;UBERON:0002067,1.12e-08,9;UBERON:0004016,1.12e-08,9;UBERON:0010083,1.12e-08,9;UBERON:0001134,1.63e-08,62;UBERON:0002036,1.63e-08,62;UBERON:0003082,1.63e-08,62;UBERON:0002385,5.58e-08,64;UBERON:0001015,5.58e-08,64;UBERON:0000383,5.58e-08,64;UBERON:0010314,8.81e-08,132;UBERON:0000956,1.39e-07,25;UBERON:0000203,1.39e-07,25;UBERON:0002199,1.67e-07,46;UBERON:0002416,1.67e-07,46;UBERON:0000992,2.15e-07,13;UBERON:0001135,3.30e-07,15;UBERON:0001950,4.63e-07,20 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,3.15859936713415,0,0,0,0,0.263766978228454,0.123766352960047,0,12.101852636132,10.8485015044316,11.684961446198,13.1741855673437,1.60057375499824,2.04000691244253,1.25381888591235,1.43117993565528,3.55873505189499,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0,0,0,0,0,1.03088233644789,0.506039384039006,0,0,0,0,0,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,1.5905718941022,0.486634870302636,0.0945348171640679,1.10864698731282,0.351339142772504,0.327447688744282,0,0,15.5782748954248,10.2736545006568,13.0298801308488,0.238490624305342,0,0,0,4.30117297553062,0,0,0,0,0.208994966536811,0.775250277507987,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93858995491861,13.5057364429483,9.75244510545967,4.61068896857864,1.12135520028461,0,4.9333509683432,0,0.67355336034844,0.490385709340376,0.151357427644931,0,2.81185718200556,15.608003841516,14.8322673601557,14.9448680551801,11.3911463684452,10.8454872726648,10.2529088892641,3.0623125688234,15.7227926159063,2.27316718586684,2.37600571456411,0.989067717114227,0,0.718618141816238,17.6752919651769,4.8796222750066,3.60183350129438,3.07284334616587,0.30648779579902,1.65261864797256,0.340296549480063,2.87023417102179,0.213557388818567,0.847727604638247,4.20127534518163,1.54578793857658,0.257640540045629,0.18611685633159,6.58227695740938,0.779496041289589,0.757301322732344,0.276149695926898,0,3.55009592516614,2.01504196455281,1.01736355386293,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.829288440122964,0,0,1.56449532329816,0.643240938192885,11.0507937081984,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,2.28065813717227,5.19967392639789,1.44331342025273,0,0.352226082707465,0,0,0,0,0,1.72351904261178,8.19014927987332,10.2555501979222,0,0.16798212819886,0,0.268675568108545,1.16253575405585,2.68367875415648,0.492663237895943,0,8.08579650609011,4.03535869567492,6.69084897159814,0.507983154337352,4.20187268114105,0,1.71072446022705,0.514137463516618,3.60411669412701,0,0.336393253036082,0,0.51336800074665,3.49033632546,0,1.690605505112,1.32969058292435,0,0.257207374262142,0,0,0,0,0,3.58309802723109,0,0,7.53598442648965,0.871533458600294,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,8.5582143024431,0,0,0.716243852959582,0,0.197030760201927,0,0.128343036279748,8.13102797511883,1.30139853857622,0,2.01019518401218,0,0,0,0,0,0,0.542530047399471,0,0,0,0,0,2.27407504055985,2.0694614258501,0,1.65932251687533,3.82287903659565,1.37060810223918,1.02943027143257,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0,0.482561763430822,0,12.6451948918178,12.606882497232,7.39144404124282,9.34657972530518,7.32125384297743,0,0,0,0.918515585316854,0.182091168006717,0,0.902399225814824,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0,0,0.082509499920588,0.574265537996172,1.30012049207304,0,2.12675580242668,0.308097234229289,0.15350367472613,0.827019434907183,0.107420244868274,0,0.681813019328807,0.801288320820636,0,0,0,0,3.71876439437829,6.61105928344344,25.0933417257816,6.77673876387395,9.58150854570639,17.3986598415015,6.4863476686372,0.143124886741991,0.372158369359667,0,0.38126038784765,0.255897791311334,0.42793898803392,11.7735201732597,0.78494864019923,0,0,0.235624804691373,4.85237955775958,7.92551605865041,3.79132610615083,0,8.28625864746367,4.22600587027022,0.409499734223957,0,19.2113798254413,3.85955740482287,1.99031692572366,1.75380354101505,0,0.655894752046633,8.31932545547087,14.5617044106883,12.6763021139509,2.15117028306077,0,9.98678944147501,4.25713276884717,0,0,3.41525856389144,1.39973888097993,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.703347082052564,12.6891923726113,0.16480387422676,0,0,0,0.251932747854276,13.192660042778,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,0,0,0,0,0,0,0.583209226766509,0,0,0.361789315876224,0,0,0,1.53569778007781,0,0,0.230850775511391,0,0,0,0,0,2.10674464824283,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0,0,0.296521128680622,0.247127877893006,0.313265848516366,0.202203398942031,0,0.234264445725339,0,0.19566461893209,11.1678974585683,0,0,1.53036380815245,0.063186579628488,1.50323419414493,1.03688191397247,0.664653872707185,0,2.82539626566503,2.38944859545918,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,4.79646736263628,1.39100228192093,2.089256266544,0,1.84365286578528,0,0.599428828746391,0,0.114536596165916,7.378584908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| ||
|short_description=p1@CNIH3 | |||
}} | }} |
Latest revision as of 23:46, 15 September 2015
Short description: | p1@CNIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNIH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000272133_5end |
EntrezGene: | CNIH3 |
HGNC: | 26802 |
UniProt: | Q8TBE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.32e-20 | 32 |
smooth muscle cell | 7.08e-14 | 43 |
smooth muscle myoblast | 7.08e-14 | 43 |
fibroblast | 1.13e-12 | 76 |
aortic smooth muscle cell | 2.17e-12 | 10 |
muscle cell | 9.75e-11 | 55 |
muscle precursor cell | 1.04e-09 | 58 |
myoblast | 1.04e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-09 | 58 |
electrically responsive cell | 1.59e-09 | 61 |
electrically active cell | 1.59e-09 | 61 |
fibroblast of dermis | 1.49e-08 | 6 |
skin fibroblast | 7.07e-08 | 23 |
multi fate stem cell | 1.39e-07 | 427 |
somatic stem cell | 4.34e-07 | 433 |
stem cell | 9.68e-07 | 441 |
migratory neural crest cell | 9.92e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.86e-09 | 14 |