FFCP PHASE1:Hg19::chr11:29181712..29181720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29181712..29181720,+ | |||
|coexpression_cluster_id=C495 | |coexpression_cluster_id=C495 | ||
|description=CAGE_peak_at_chr11:29181712..29181720,+ | |description=CAGE_peak_at_chr11:29181712..29181720,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!4.78e-14!19 | |ontology_enrichment_celltype=CL:0000077!4.78e-14!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.64e-14;19!CL:0002174;2.82e-09;1!CL:0000501;2.82e-09;1!CL:0000222;6.98e-09;1!CL:1000306;1.07e-08;4!CL:0002547;1.07e-08;4!CL:0000306;1.76e-08;4!CL:0002222;1.76e-08;4!CL:0002224;1.76e-08;4!CL:0002537;3.06e-07;5 | |ontology_enrichment_celltype_v019=CL:0000077;1.64e-14;19!CL:0002174;2.82e-09;1!CL:0000501;2.82e-09;1!CL:0000222;6.98e-09;1!CL:1000306;1.07e-08;4!CL:0002547;1.07e-08;4!CL:0000306;1.76e-08;4!CL:0002222;1.76e-08;4!CL:0002224;1.76e-08;4!CL:0002537;3.06e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.40e-14,19;CL:0002174,2.82e-09,1;CL:0000501,2.82e-09,1;CL:1000306,9.94e-09,4;CL:0002547,9.94e-09,4;CL:0000306,1.64e-08,4;CL:0002222,1.64e-08,4;CL:0002224,1.64e-08,4;CL:0002537,2.97e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;6.98e-09;1 | |ontology_enrichment_disease_v019=DOID:3571;6.98e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,9.91e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.07e-08;4!UBERON:0000415;1.07e-08;4!UBERON:0007240;1.07e-08;4!UBERON:0005742;1.07e-08;4!UBERON:0005734;1.07e-08;4!UBERON:0004664;1.07e-08;4!UBERON:0004663;1.07e-08;4!UBERON:0010077;1.76e-08;4!UBERON:0005389;1.76e-08;4!UBERON:0000484;1.76e-08;4!UBERON:0000965;1.76e-08;4!UBERON:0001803;1.76e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.07e-08;4!UBERON:0000415;1.07e-08;4!UBERON:0007240;1.07e-08;4!UBERON:0005742;1.07e-08;4!UBERON:0005734;1.07e-08;4!UBERON:0004664;1.07e-08;4!UBERON:0004663;1.07e-08;4!UBERON:0010077;1.76e-08;4!UBERON:0005389;1.76e-08;4!UBERON:0000484;1.76e-08;4!UBERON:0000965;1.76e-08;4!UBERON:0001803;1.76e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,9.94e-09,4;UBERON:0007240,9.94e-09,4;UBERON:0005742,9.94e-09,4;UBERON:0005734,9.94e-09,4;UBERON:0004664,9.94e-09,4;UBERON:0004663,9.94e-09,4;UBERON:0010077,1.64e-08,4;UBERON:0005389,1.64e-08,4;UBERON:0000484,1.64e-08,4;UBERON:0002546,1.64e-08,4;UBERON:0000965,1.64e-08,4;UBERON:0001803,1.64e-08,4;UBERON:0003073,1.64e-08,4;UBERON:0005426,1.64e-08,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,4.237093786023,1.43418310374407,0,0,1.06748995729705,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61105928344344,0,0,0,0,0.37064843820784,0.715624433709956,0,0.949138274156178,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53614521001611,0,2.15012491469462,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.799238438328521,0,0.80175617316141,0.171594997861965,0,0,0,0.407712618220842,0.313808538937,0,0,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,6.98590889320229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0.400027764663154,0,0,1.26184898228651,0,0.643324774124777,2.08795433572169,2.72047110614727,5.09349443512435,0.244736704506468,20.5952167243711,32.1153505047411,0.219284049578707,0.530067437837643,1.73622634443823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,1.59002175326709,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0.342976018874837,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.258355639344024,1.98639085746745,2.01837352645104,0,0.808468755832877,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.886917589850256,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,4.237093786023,1.43418310374407,0,0,1.06748995729705,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61105928344344,0,0,0,0,0.37064843820784,0.715624433709956,0,0.949138274156178,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53614521001611,0,2.15012491469462,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0.799238438328521,0,0.80175617316141,0.171594997861965,0,0,0,0.407712618220842,0.313808538937,0,0,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,6.98590889320229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0.400027764663154,0,0,1.26184898228651,0,0.643324774124777,2.08795433572169,2.72047110614727,5.09349443512435,0.244736704506468,20.5952167243711,32.1153505047411,0.219284049578707,0.530067437837643,1.73622634443823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,1.59002175326709,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0.342976018874837,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,0.705789743431384,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.258355639344024,1.98639085746745,2.01837352645104,0,0.808468755832877,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:29181712..29181720,+ | |short_description=p@chr11:29181712..29181720,+ | ||
}} | }} |
Latest revision as of 21:22, 23 July 2015
Short description: | p@chr11:29181712..29181720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:29181712..29181720, + |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.40e-14 | 19 |
follicular cell of ovary | 2.82e-09 | 1 |
granulosa cell | 2.82e-09 | 1 |
fibroblast of tunica adventitia of artery | 9.94e-09 | 4 |
fibroblast of the aortic adventitia | 9.94e-09 | 4 |
crystallin accumulating cell | 1.64e-08 | 4 |
vertebrate lens cell | 1.64e-08 | 4 |
lens epithelial cell | 1.64e-08 | 4 |
amnion mesenchymal stem cell | 2.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
artery wall | 9.94e-09 | 4 |
tunica adventitia of artery | 9.94e-09 | 4 |
adventitia | 9.94e-09 | 4 |
tunica adventitia of blood vessel | 9.94e-09 | 4 |
aorta tunica adventitia | 9.94e-09 | 4 |
aorta wall | 9.94e-09 | 4 |
cuboidal epithelium | 1.64e-08 | 4 |
transparent eye structure | 1.64e-08 | 4 |
simple cuboidal epithelium | 1.64e-08 | 4 |
cranial placode | 1.64e-08 | 4 |
lens of camera-type eye | 1.64e-08 | 4 |
epithelium of lens | 1.64e-08 | 4 |
lens placode | 1.64e-08 | 4 |
lens vesicle | 1.64e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.91e-09 | 1 |