FFCP PHASE1:Hg19::chr2:220379200..220379231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55515 | |EntrezGene=55515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21263 | |HGNC=21263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=308bp_to_ENST00000461395_5end | |association_with_transcript=308bp_to_ENST00000461395_5end | ||
|cluster_id=chr2:220379200..220379231,+ | |||
|description=CAGE_peak_2_at_ACCN4_5end | |description=CAGE_peak_2_at_ACCN4_5end | ||
|id=chr2:220379200..220379231,+ | |id=chr2:220379200..220379231,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.54e-13;2!CL:0000558;9.54e-13;2!CL:0000222;3.30e-07;1 | |ontology_enrichment_celltype_v019=CL:0000764;9.54e-13;2!CL:0000558;9.54e-13;2!CL:0000222;3.30e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.88e-13,2;CL:0000765,5.88e-13,2;CL:0000050,5.88e-13,2;CL:0000038,5.88e-13,2;CL:0000558,5.88e-13,2;CL:0000547,5.88e-13,2;CL:0000549,5.88e-13,2;CL:0000550,5.88e-13,2;CL:0000552,5.88e-13,2;CL:0000763,2.67e-08,108;CL:0000049,2.67e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.39e-09;3 | |ontology_enrichment_development_v019=UBERON:0003056;5.39e-09;3 | ||
|ontology_enrichment_disease=DOID:8692!2.02e-11!31;DOID:1036!1.87e-09!8;DOID:1240!2.35e-09!39 | |ontology_enrichment_disease=DOID:8692!2.02e-11!31;DOID:1036!1.87e-09!8;DOID:1240!2.35e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:1036;3.19e-27;8!DOID:8692;5.30e-22;31!DOID:1240;1.18e-13;39!DOID:2531;7.32e-09;51!DOID:0060083;7.32e-09;51!DOID:8552;1.07e-07;1 | |ontology_enrichment_disease_v019=DOID:1036;3.19e-27;8!DOID:8692;5.30e-22;31!DOID:1240;1.18e-13;39!DOID:2531;7.32e-09;51!DOID:0060083;7.32e-09;51!DOID:8552;1.07e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.85e-27,8;DOID:8692,1.94e-22,31;DOID:1240,2.07e-17,39;DOID:2531,7.97e-13,51;DOID:0060083,7.97e-13,51;DOID:8552,1.10e-07,1;DOID:0050686,3.65e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-44!57;UBERON:0005068!1.07e-44!57;UBERON:0006241!1.07e-44!57;UBERON:0007135!1.07e-44!57;UBERON:0002780!4.79e-41!41;UBERON:0001890!4.79e-41!41;UBERON:0006240!4.79e-41!41;UBERON:0003080!7.68e-40!42;UBERON:0002616!5.76e-38!59;UBERON:0000073!1.31e-37!94;UBERON:0001016!1.31e-37!94;UBERON:0001017!1.59e-37!82;UBERON:0005743!4.15e-37!86;UBERON:0000955!3.92e-36!69;UBERON:0006238!3.92e-36!69;UBERON:0003075!7.20e-34!86;UBERON:0007284!7.20e-34!86;UBERON:0007023!7.77e-34!115;UBERON:0002346!2.43e-33!90;UBERON:0002020!7.20e-33!34;UBERON:0003528!7.20e-33!34;UBERON:0001893!1.54e-32!34;UBERON:0002791!5.06e-31!33;UBERON:0003056!3.65e-30!61;UBERON:0001869!5.96e-30!32;UBERON:0002619!1.25e-25!22;UBERON:0001950!2.12e-22!20;UBERON:0000956!5.31e-22!25;UBERON:0000203!5.31e-22!25;UBERON:0000924!4.90e-20!173;UBERON:0006601!4.90e-20!173;UBERON:0004121!6.25e-20!169;UBERON:0000033!3.60e-19!123;UBERON:0000153!1.25e-18!129;UBERON:0007811!1.25e-18!129;UBERON:0002308!1.52e-12!9;UBERON:0000125!1.52e-12!9;UBERON:0000200!7.56e-12!6;UBERON:0001894!6.20e-10!7;UBERON:0006222!6.20e-10!7;UBERON:0002420!2.30e-09!9;UBERON:0007245!2.30e-09!9;UBERON:0010009!2.30e-09!9;UBERON:0010011!2.30e-09!9;UBERON:0000454!2.30e-09!9;UBERON:0009663!3.18e-09!7;UBERON:0001871!1.63e-08!7;UBERON:0003296!1.95e-08!4;UBERON:0010133!1.95e-08!4;UBERON:0000025!2.54e-08!194;UBERON:0000369!2.85e-08!4;UBERON:0002435!2.85e-08!4;UBERON:0000204!2.85e-08!4;UBERON:0010082!2.85e-08!4;UBERON:0003076!5.25e-07!15;UBERON:0003057!5.25e-07!15;UBERON:0005383!9.06e-07!3;UBERON:0005382!9.06e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.07e-44!57;UBERON:0005068!1.07e-44!57;UBERON:0006241!1.07e-44!57;UBERON:0007135!1.07e-44!57;UBERON:0002780!4.79e-41!41;UBERON:0001890!4.79e-41!41;UBERON:0006240!4.79e-41!41;UBERON:0003080!7.68e-40!42;UBERON:0002616!5.76e-38!59;UBERON:0000073!1.31e-37!94;UBERON:0001016!1.31e-37!94;UBERON:0001017!1.59e-37!82;UBERON:0005743!4.15e-37!86;UBERON:0000955!3.92e-36!69;UBERON:0006238!3.92e-36!69;UBERON:0003075!7.20e-34!86;UBERON:0007284!7.20e-34!86;UBERON:0007023!7.77e-34!115;UBERON:0002346!2.43e-33!90;UBERON:0002020!7.20e-33!34;UBERON:0003528!7.20e-33!34;UBERON:0001893!1.54e-32!34;UBERON:0002791!5.06e-31!33;UBERON:0003056!3.65e-30!61;UBERON:0001869!5.96e-30!32;UBERON:0002619!1.25e-25!22;UBERON:0001950!2.12e-22!20;UBERON:0000956!5.31e-22!25;UBERON:0000203!5.31e-22!25;UBERON:0000924!4.90e-20!173;UBERON:0006601!4.90e-20!173;UBERON:0004121!6.25e-20!169;UBERON:0000033!3.60e-19!123;UBERON:0000153!1.25e-18!129;UBERON:0007811!1.25e-18!129;UBERON:0002308!1.52e-12!9;UBERON:0000125!1.52e-12!9;UBERON:0000200!7.56e-12!6;UBERON:0001894!6.20e-10!7;UBERON:0006222!6.20e-10!7;UBERON:0002420!2.30e-09!9;UBERON:0007245!2.30e-09!9;UBERON:0010009!2.30e-09!9;UBERON:0010011!2.30e-09!9;UBERON:0000454!2.30e-09!9;UBERON:0009663!3.18e-09!7;UBERON:0001871!1.63e-08!7;UBERON:0003296!1.95e-08!4;UBERON:0010133!1.95e-08!4;UBERON:0000025!2.54e-08!194;UBERON:0000369!2.85e-08!4;UBERON:0002435!2.85e-08!4;UBERON:0000204!2.85e-08!4;UBERON:0010082!2.85e-08!4;UBERON:0003076!5.25e-07!15;UBERON:0003057!5.25e-07!15;UBERON:0005383!9.06e-07!3;UBERON:0005382!9.06e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.33e-13;2!UBERON:0002581;3.30e-07;1!UBERON:0001874;3.30e-07;1!UBERON:0003296;4.22e-07;4!UBERON:0010133;4.22e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000007;2.33e-13;2!UBERON:0002581;3.30e-07;1!UBERON:0001874;3.30e-07;1!UBERON:0003296;4.22e-07;4!UBERON:0010133;4.22e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.49e-13,2;UBERON:0001049,1.08e-08,56;UBERON:0005068,1.08e-08,56;UBERON:0006241,1.08e-08,56;UBERON:0007135,1.08e-08,56;UBERON:0001016,1.96e-08,89;UBERON:0001017,4.68e-08,81;UBERON:0003075,4.75e-08,82;UBERON:0007284,4.75e-08,82;UBERON:0002346,1.40e-07,86;UBERON:0000073,1.83e-07,53;UBERON:0002616,1.83e-07,53;UBERON:0001874,2.35e-07,1;UBERON:0002581,4.09e-07,1;UBERON:0003296,4.35e-07,4;UBERON:0010133,4.35e-07,4;UBERON:0000955,8.56e-07,68;UBERON:0006238,8.56e-07,68 | |||
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| ||
|short_description=p2@ACCN4 | |short_description=p2@ACCN4 | ||
}} | }} |
Latest revision as of 21:38, 24 September 2015
Short description: | p2@ACCN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACCN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 308bp_to_ENST00000461395_5end |
EntrezGene: | ACCN4 |
HGNC: | 21263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.88e-13 | 2 |
erythroblast | 5.88e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 5.88e-13 | 2 |
erythroid progenitor cell | 5.88e-13 | 2 |
reticulocyte | 5.88e-13 | 2 |
proerythroblast | 5.88e-13 | 2 |
basophilic erythroblast | 5.88e-13 | 2 |
polychromatophilic erythroblast | 5.88e-13 | 2 |
orthochromatic erythroblast | 5.88e-13 | 2 |
myeloid cell | 2.67e-08 | 108 |
common myeloid progenitor | 2.67e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.49e-13 | 2 |
neural tube | 1.08e-08 | 56 |
neural rod | 1.08e-08 | 56 |
future spinal cord | 1.08e-08 | 56 |
neural keel | 1.08e-08 | 56 |
nervous system | 1.96e-08 | 89 |
central nervous system | 4.68e-08 | 81 |
neural plate | 4.75e-08 | 82 |
presumptive neural plate | 4.75e-08 | 82 |
neurectoderm | 1.40e-07 | 86 |
regional part of nervous system | 1.83e-07 | 53 |
regional part of brain | 1.83e-07 | 53 |
putamen | 2.35e-07 | 1 |
postcentral gyrus | 4.09e-07 | 1 |
gland of diencephalon | 4.35e-07 | 4 |
neuroendocrine gland | 4.35e-07 | 4 |
brain | 8.56e-07 | 68 |
future brain | 8.56e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.85e-27 | 8 |
myeloid leukemia | 1.94e-22 | 31 |
leukemia | 2.07e-17 | 39 |
hematologic cancer | 7.97e-13 | 51 |
immune system cancer | 7.97e-13 | 51 |
chronic myeloid leukemia | 1.10e-07 | 1 |
organ system cancer | 3.65e-07 | 137 |