FFCP PHASE1:Hg19::chr17:2497099..2497106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5048 | |EntrezGene=5048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8574 | |HGNC=8574 | ||
|TSSclassifier=strong | |||
|UniProt=P43034 | |UniProt=P43034 | ||
|association_with_transcript=176bp_to_ENST00000397195,NM_000430,uc002fuw.3,uc010ckb.1_5end | |association_with_transcript=176bp_to_ENST00000397195,NM_000430,uc002fuw.3,uc010ckb.1_5end | ||
|cluster_id=chr17:2497099..2497106,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_19_at_PAFAH1B1_5end | |description=CAGE_peak_19_at_PAFAH1B1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.56e-12!115;UBERON:0000988!2.92e-10!3;UBERON:0002771!1.35e-09!3;UBERON:0002346!1.12e-08!90;UBERON:0001017!1.15e-08!82;UBERON:0001049!1.47e-08!57;UBERON:0005068!1.47e-08!57;UBERON:0006241!1.47e-08!57;UBERON:0007135!1.47e-08!57;UBERON:0002020!2.21e-08!34;UBERON:0003528!2.21e-08!34;UBERON:0003075!3.33e-08!86;UBERON:0007284!3.33e-08!86;UBERON:0000200!3.42e-08!6;UBERON:0002616!3.67e-08!59;UBERON:0005743!4.44e-08!86;UBERON:0001950!6.91e-08!20;UBERON:0002148!2.31e-07!2;UBERON:0009662!2.31e-07!2;UBERON:0002619!4.29e-07!22;UBERON:0002360!4.35e-07!2;UBERON:0000094!4.35e-07!2;UBERON:0007645!4.35e-07!2;UBERON:0000073!6.06e-07!94;UBERON:0001016!6.06e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!6.56e-12!115;UBERON:0000988!2.92e-10!3;UBERON:0002771!1.35e-09!3;UBERON:0002346!1.12e-08!90;UBERON:0001017!1.15e-08!82;UBERON:0001049!1.47e-08!57;UBERON:0005068!1.47e-08!57;UBERON:0006241!1.47e-08!57;UBERON:0007135!1.47e-08!57;UBERON:0002020!2.21e-08!34;UBERON:0003528!2.21e-08!34;UBERON:0003075!3.33e-08!86;UBERON:0007284!3.33e-08!86;UBERON:0000200!3.42e-08!6;UBERON:0002616!3.67e-08!59;UBERON:0005743!4.44e-08!86;UBERON:0001950!6.91e-08!20;UBERON:0002148!2.31e-07!2;UBERON:0009662!2.31e-07!2;UBERON:0002619!4.29e-07!22;UBERON:0002360!4.35e-07!2;UBERON:0000094!4.35e-07!2;UBERON:0007645!4.35e-07!2;UBERON:0000073!6.06e-07!94;UBERON:0001016!6.06e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45328856692223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,5.53184496993148,19.0254532410887,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45328856692223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,5.53184496993148,19.0254532410887,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@PAFAH1B1 | |short_description=p19@PAFAH1B1 | ||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p19@PAFAH1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PAFAH1B1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 176bp_to_ENST00000397195, NM_000430, uc002fuw.3, uc010ckb.1_5end |
EntrezGene: | PAFAH1B1 |
HGNC: | 8574 |
UniProt: | P43034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |