FFCP PHASE1:Hg19::chr1:26607565..26607584,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:26607565..26607584,+
|short_description=p@chr1:26607565..26607584,+
|description=CAGE_peak_at_chr1:26607565..26607584,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:26607565..26607584,+ | |||
|coexpression_cluster_id=C853 | |||
|description=CAGE_peak_at_chr1:26607565..26607584,+ | |||
|id=chr1:26607565..26607584,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.81e-21!42;CL:0000766!3.62e-20!76;CL:0000839!1.20e-19!70;CL:0002371!2.08e-19!591;CL:0000557!3.47e-19!71;CL:0000723!3.62e-19!436;CL:0000048!7.87e-19!430;CL:0000860!1.01e-18!45;CL:0000034!4.84e-18!444;CL:0002009!4.98e-18!65;CL:0002194!5.27e-18!63;CL:0000576!5.27e-18!63;CL:0000040!5.27e-18!63;CL:0000559!5.27e-18!63;CL:0000144!2.87e-16!625;CL:0000763!1.57e-13!112;CL:0000049!1.57e-13!112;CL:0000134!1.10e-11!358;CL:0002320!1.66e-11!365;CL:0000003!4.53e-11!722;CL:0000548!1.22e-08!679;CL:0000004!1.22e-08!679;CL:0000255!1.22e-08!679;CL:0000012!1.49e-08!682;CL:0000219!3.33e-08!390;CL:0002031!7.64e-08!124;CL:0000192!1.50e-07!42;CL:0000514!1.50e-07!42;CL:0000738!1.56e-07!140;CL:0000222!2.68e-07!119;CL:0000680!2.82e-07!57;CL:0000056!2.82e-07!57;CL:0000355!2.82e-07!57;CL:0000359!5.26e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.14e-20;33!CL:0002057;4.14e-20;33!CL:0000473;3.63e-19;39!CL:0000234;3.63e-19;39!CL:0000576;1.63e-12;48!CL:0000766;9.66e-12;69!CL:0000359;7.18e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.85e-26,48;CL:0000234,1.85e-26,48;CL:0000766,3.75e-24,72;CL:0000860,1.73e-23,42;CL:0002057,1.73e-23,42;CL:0000839,5.85e-23,66;CL:0000557,7.47e-23,67;CL:0002194,1.45e-21,59;CL:0000576,1.45e-21,59;CL:0000040,1.45e-21,59;CL:0000559,1.45e-21,59;CL:0002009,2.85e-21,61;CL:0000723,1.77e-20,433;CL:0000048,6.00e-20,427;CL:0000034,5.43e-19,441;CL:0000763,4.38e-15,108;CL:0000049,4.38e-15,108;CL:0000134,1.05e-12,354;CL:0002320,2.55e-12,361;CL:0002031,4.40e-09,120;CL:0000219,4.75e-09,386;CL:0000738,1.21e-08,136;CL:0002087,1.03e-07,115;CL:0000192,1.07e-07,43;CL:0000514,1.07e-07,43;CL:0000359,4.73e-07,32;CL:0000680,5.24e-07,58;CL:0000056,5.24e-07,58;CL:0000355,5.24e-07,58;CL:0002032,5.60e-07,161;CL:0000837,5.60e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.60e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.54e-23!167;UBERON:0003081!4.67e-20!216;UBERON:0002371!6.29e-19!80;UBERON:0002390!6.26e-17!102;UBERON:0003061!6.26e-17!102;UBERON:0002193!8.70e-17!112;UBERON:0004765!1.30e-16!101;UBERON:0001434!1.30e-16!101;UBERON:0001474!2.25e-16!86;UBERON:0002405!6.18e-12!115;UBERON:0002384!8.69e-11!375;UBERON:0000926!1.46e-08!448;UBERON:0004120!1.46e-08!448;UBERON:0006603!1.46e-08!448;UBERON:0001637!2.35e-08!42;UBERON:0003509!2.35e-08!42;UBERON:0004572!2.35e-08!42;UBERON:0000486!7.95e-08!82;UBERON:0000914!2.84e-07!83;UBERON:0002329!2.84e-07!83;UBERON:0003077!2.84e-07!83;UBERON:0003059!2.84e-07!83;UBERON:0007282!2.84e-07!83;UBERON:0009618!2.84e-07!83;UBERON:0007285!2.84e-07!83;UBERON:0004535!7.85e-07!110;UBERON:0004573!8.05e-07!33;UBERON:0004571!8.05e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.85e-07;42!UBERON:0003509;4.85e-07;42!UBERON:0004572;4.85e-07;42!UBERON:0004573;8.89e-07;33!UBERON:0004571;8.89e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.23e-25,167;UBERON:0003081,1.48e-22,203;UBERON:0002371,3.09e-22,76;UBERON:0000926,8.05e-20,315;UBERON:0004120,8.05e-20,315;UBERON:0006603,8.05e-20,315;UBERON:0001474,2.96e-19,82;UBERON:0001434,6.42e-19,100;UBERON:0002390,8.94e-19,98;UBERON:0003061,8.94e-19,98;UBERON:0004765,3.12e-18,90;UBERON:0002405,7.66e-18,93;UBERON:0002193,8.58e-18,108;UBERON:0002384,1.08e-11,371;UBERON:0001637,5.51e-09,42;UBERON:0003509,5.51e-09,42;UBERON:0004572,5.51e-09,42;UBERON:0000486,4.55e-08,83;UBERON:0004573,2.78e-07,33;UBERON:0004571,2.78e-07,33;UBERON:0002329,5.06e-07,71;UBERON:0003059,5.06e-07,71;UBERON:0007282,5.06e-07,71;UBERON:0004290,5.06e-07,71;UBERON:0009618,5.06e-07,71;UBERON:0007524,5.78e-07,73;UBERON:0007500,9.63e-07,59;UBERON:0001981,9.63e-07,59;UBERON:0004537,9.63e-07,59;UBERON:0006965,9.63e-07,59 | |||
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| ||
|short_description=p@chr1:26607565..26607584,+ | |||
}} | }} |
Latest revision as of 06:35, 28 July 2015
Short description: | p@chr1:26607565..26607584, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26607565..26607584, + |
Coexpression cluster: | C853_Neutrophils_leiomyoma_Smooth_Monocytederived_CD14_Osteoblast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.23e-25 | 167 |
lateral plate mesoderm | 1.48e-22 | 203 |
bone marrow | 3.09e-22 | 76 |
mesoderm | 8.05e-20 | 315 |
mesoderm-derived structure | 8.05e-20 | 315 |
presumptive mesoderm | 8.05e-20 | 315 |
bone element | 2.96e-19 | 82 |
skeletal system | 6.42e-19 | 100 |
hematopoietic system | 8.94e-19 | 98 |
blood island | 8.94e-19 | 98 |
skeletal element | 3.12e-18 | 90 |
immune system | 7.66e-18 | 93 |
hemolymphoid system | 8.58e-18 | 108 |
connective tissue | 1.08e-11 | 371 |
artery | 5.51e-09 | 42 |
arterial blood vessel | 5.51e-09 | 42 |
arterial system | 5.51e-09 | 42 |
multilaminar epithelium | 4.55e-08 | 83 |
systemic artery | 2.78e-07 | 33 |
systemic arterial system | 2.78e-07 | 33 |
somite | 5.06e-07 | 71 |
presomitic mesoderm | 5.06e-07 | 71 |
presumptive segmental plate | 5.06e-07 | 71 |
dermomyotome | 5.06e-07 | 71 |
trunk paraxial mesoderm | 5.06e-07 | 71 |
dense mesenchyme tissue | 5.78e-07 | 73 |
epithelial tube open at both ends | 9.63e-07 | 59 |
blood vessel | 9.63e-07 | 59 |
blood vasculature | 9.63e-07 | 59 |
vascular cord | 9.63e-07 | 59 |