FFCP PHASE1:Hg19::chr1:212004169..212004183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9926 | |EntrezGene=9926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28985 | |HGNC=28985 | ||
|TSSclassifier=strong | |||
|UniProt=Q92604,Q53YL2 | |UniProt=Q92604,Q53YL2 | ||
|association_with_transcript=-55bp_to_ENST00000366997,NM_014873,uc001hiv.2_5end | |association_with_transcript=-55bp_to_ENST00000366997,NM_014873,uc001hiv.2_5end | ||
|cluster_id=chr1:212004169..212004183,- | |||
|description=CAGE_peak_5_at_LPGAT1_5end | |description=CAGE_peak_5_at_LPGAT1_5end | ||
|id=chr1:212004169..212004183,- | |id=chr1:212004169..212004183,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!2.12e-07!42;UBERON:0002780!2.66e-07!41;UBERON:0001890!2.66e-07!41;UBERON:0006240!2.66e-07!41;UBERON:0000955!3.19e-07!69;UBERON:0006238!3.19e-07!69;UBERON:0001869!6.22e-07!32 | |ontology_enrichment_uberon=UBERON:0003080!2.12e-07!42;UBERON:0002780!2.66e-07!41;UBERON:0001890!2.66e-07!41;UBERON:0006240!2.66e-07!41;UBERON:0000955!3.19e-07!69;UBERON:0006238!3.19e-07!69;UBERON:0001869!6.22e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.60e-08;20!UBERON:0002619;2.70e-07;22!UBERON:0001869;5.31e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.60e-08;20!UBERON:0002619;2.70e-07;22!UBERON:0001869;5.31e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.79e-09,41;UBERON:0001890,3.79e-09,41;UBERON:0003080,3.79e-09,41;UBERON:0006240,3.79e-09,41;UBERON:0001950,3.42e-08,20;UBERON:0001869,7.91e-08,32;UBERON:0001049,1.51e-07,56;UBERON:0005068,1.51e-07,56;UBERON:0006241,1.51e-07,56;UBERON:0007135,1.51e-07,56;UBERON:0000073,2.13e-07,53;UBERON:0002616,2.13e-07,53;UBERON:0002346,2.94e-07,86;UBERON:0002619,3.44e-07,22;UBERON:0001893,3.98e-07,34;UBERON:0002791,7.93e-07,32 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.12763523276777,1.0007329835313,0.893922188854576,0,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0.618831764800233,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.738726348460727,0.204000691244253,0,0.85870796139317,0.410623275218653,0.251085279189606,0.764134057479513,1.72411237844886,1.8890587515283,0,0.383829398097213,0.464448369948228,0.919421224478927,0.30120591877825,0,0.232401601740905,0.284338464974843,0.587200878669695,1.66198622559563,2.00544447470142,0,0,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0.929716147622738,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,1.93645405075148,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.997318288108159,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,1.47311054395026,0.632924774881769,0.211255286311942,0.637812899895131,0.628975936525128,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0.91332076882317,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.590129310341499,1.96505381374582,0,0,0.977766799900771,0,0,0.111410456885174,0.883817722424512,0,0.270803863765016,0.25618263945135,0.650296737799391,0.822189523018381,0,0.869409257205157,0.296573126324121,0.802622484269139,0,0.339928028092699,1.14966148080576,0,0,0.95569624297229,0,0.950452044448374,0.752875595388864,0.383959833463255,1.24930726552346,0.947109008176067,0,0.604820229674197,0.802320587350522,0.724122019413995,0,0,0.255725123687061,1.0843174571537,1.00267582127178,1.30361867064741,1.5905718941022,0.486634870302636,0.567208902984407,0.665188192387692,1.22968699970376,0.916853528483988,0,0.370784442784429,0.649094787309367,1.39303789839414,0.797747763113191,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,1.46296476575767,1.29208379584664,0.71153252537342,0.33472061276467,0.805658634218294,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0.496971951695318,0.379891534993739,0.529636723252875,0,0.709336764396714,0,0,0.24666754841716,1.24484414159907,0.808264032418128,0.653847612453835,0.605429710579726,2.30470369792,0.234321431833797,0,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,0.702254033511242,0.204154171254893,0.368502951935304,0.413303124703062,0,0.741800787835671,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,0.751190294532984,0.340296549480063,0.538168907066586,1.06778694409284,0.211931901159562,1.20036438433761,0.721367704669072,0,0.558350568994769,0,0.876933046450788,0.757301322732344,0.276149695926898,0.484938170456436,0.355009592516614,0.806016785821122,0,0.773043412653187,0.818238361772504,1.14721838155602,0.121973706129595,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0.946454400318751,0.674338760312407,0.723033089650446,0.55146986366197,1.30727666455444,2.13543557199987,0.134831308160164,0.588664395376038,1.15424147083917,0.738155454624648,0,0,0,0,1.96565443335525,0.590789906681404,0,0.491953754172454,0.171567810298526,0.548751427043128,1.1240175325762,0.904760751704678,0.0925884451585296,0,0,0,0.463721619900307,0.587043471179108,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.743155811443641,0,0.839910640994298,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0.880484340132261,0.829312462163088,0.144119953416961,0.75745460055828,0.317489471460845,1.14596527667483,0,0,0.308482478109971,0,0,0.112131084345361,0,0.2933531432838,0.387815147273333,3.57656445851882,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0.904318131178758,0,0.599837947092342,1.2162378064119,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,0.821905290201534,0.179060963239896,0.336255431980582,1.18218456121156,0.862510299438069,0.641715181398742,0.76228387266739,0,0,0.837581326671744,0.637938751653163,1.49801404789436,0,1.65766205374414,0.858840442033979,1.50051156317903,0.271265023699736,1.24782516918484,1.07057393278297,0.315404830067869,0.819989904948992,0.300946099727719,0,2.0694614258501,0,0.553107505625109,0.173767228936166,0.391602314925481,0,0.413536052245775,0.647142602455851,0.74709290462411,0,0,0.604780586659361,0.496215615637554,0.920771839728375,0.841980283299221,0.896974044789907,0.511707249066704,1.44768529029247,0,0.616838775210622,0.355123450626254,0.164254312027618,0.519254429183621,0.464841513839837,0.483437798366489,0.200506470303285,0.460404944679482,0.114814448164607,0.364182336013434,0.917870904715969,1.35359883872224,0.847168708148562,0,0,0.844413031143006,1.13733384070897,0.170093705276516,0.863663664408557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| ||
|short_description=p5@LPGAT1 | |short_description=p5@LPGAT1 | ||
}} | }} |
Latest revision as of 23:20, 24 September 2015
Short description: | p5@LPGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LPGAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000366997, NM_014873, uc001hiv.2_5end |
EntrezGene: | LPGAT1 |
HGNC: | 28985 |
UniProt: | Q92604Q53YL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.79e-09 | 41 |
forebrain | 3.79e-09 | 41 |
anterior neural tube | 3.79e-09 | 41 |
future forebrain | 3.79e-09 | 41 |
neocortex | 3.42e-08 | 20 |
cerebral hemisphere | 7.91e-08 | 32 |
neural tube | 1.51e-07 | 56 |
neural rod | 1.51e-07 | 56 |
future spinal cord | 1.51e-07 | 56 |
neural keel | 1.51e-07 | 56 |
regional part of nervous system | 2.13e-07 | 53 |
regional part of brain | 2.13e-07 | 53 |
neurectoderm | 2.94e-07 | 86 |
regional part of cerebral cortex | 3.44e-07 | 22 |
telencephalon | 3.98e-07 | 34 |
regional part of telencephalon | 7.93e-07 | 32 |