FFCP PHASE1:Hg19::chr8:143833961..143833974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=137797 | |EntrezGene=137797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25215 | |HGNC=25215 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXB3,F1T0L0 | |UniProt=Q6UXB3,F1T0L0 | ||
|association_with_transcript=-9bp_to_ENST00000359228,NM_205545,uc003ywz.2_5end | |association_with_transcript=-9bp_to_ENST00000359228,NM_205545,uc003ywz.2_5end | ||
|cluster_id=chr8:143833961..143833974,- | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_2_at_LYPD2_5end | |description=CAGE_peak_2_at_LYPD2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!4.63e-35!42;CL:0000860!7.20e-32!45;CL:0002194!5.86e-20!63;CL:0000576!5.86e-20!63;CL:0000040!5.86e-20!63;CL:0000559!5.86e-20!63;CL:0000766!1.69e-19!76;CL:0002009!5.45e-19!65;CL:0000839!8.04e-17!70;CL:0000557!2.00e-16!71;CL:0002087!4.25e-12!119;CL:0000738!3.40e-11!140;CL:0000763!2.02e-09!112;CL:0000049!2.02e-09!112;CL:0002031!7.03e-09!124;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000037!9.47e-07!172;CL:0000566!9.47e-07!172 | |ontology_enrichment_celltype=CL:0002057!4.63e-35!42;CL:0000860!7.20e-32!45;CL:0002194!5.86e-20!63;CL:0000576!5.86e-20!63;CL:0000040!5.86e-20!63;CL:0000559!5.86e-20!63;CL:0000766!1.69e-19!76;CL:0002009!5.45e-19!65;CL:0000839!8.04e-17!70;CL:0000557!2.00e-16!71;CL:0002087!4.25e-12!119;CL:0000738!3.40e-11!140;CL:0000763!2.02e-09!112;CL:0000049!2.02e-09!112;CL:0002031!7.03e-09!124;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9;CL:0000037!9.47e-07!172;CL:0000566!9.47e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-26;33!CL:0002057;1.65e-26;33!CL:0000576;1.58e-20;48!CL:0000473;6.65e-19;39!CL:0000234;6.65e-19;39!CL:0000766;2.36e-11;69!CL:0000875;1.57e-09;3!CL:0002396;1.57e-09;3!CL:0000767;1.29e-08;3!CL:0000226;3.25e-08;3!CL:0000842;3.25e-08;3 | |ontology_enrichment_celltype_v019=CL:0000860;1.65e-26;33!CL:0002057;1.65e-26;33!CL:0000576;1.58e-20;48!CL:0000473;6.65e-19;39!CL:0000234;6.65e-19;39!CL:0000766;2.36e-11;69!CL:0000875;1.57e-09;3!CL:0002396;1.57e-09;3!CL:0000767;1.29e-08;3!CL:0000226;3.25e-08;3!CL:0000842;3.25e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.66e-38,42;CL:0002057,2.66e-38,42;CL:0000473,1.68e-32,48;CL:0000234,1.68e-32,48;CL:0002194,2.07e-24,59;CL:0000576,2.07e-24,59;CL:0000040,2.07e-24,59;CL:0000559,2.07e-24,59;CL:0000766,5.03e-24,72;CL:0002009,2.27e-23,61;CL:0000839,4.80e-21,66;CL:0000557,1.27e-20,67;CL:0000763,2.49e-13,108;CL:0000049,2.49e-13,108;CL:0002087,4.80e-13,115;CL:0000738,1.13e-12,136;CL:0002393,1.26e-10,9;CL:0002397,1.26e-10,9;CL:0000875,1.57e-09,3;CL:0002396,1.57e-09,3;CL:0002031,2.57e-09,120;CL:0000037,1.19e-08,168;CL:0000767,1.27e-08,3;CL:0000226,2.99e-08,3;CL:0000842,2.99e-08,3;CL:0000988,8.43e-08,177;CL:0002032,3.35e-07,161;CL:0000837,3.35e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-27;42 | |ontology_enrichment_development_v019=CL:0002057;2.18e-27;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.55e-22!102;UBERON:0003061!5.55e-22!102;UBERON:0002193!8.72e-20!112;UBERON:0002371!2.42e-13!80;UBERON:0001474!1.89e-12!86;UBERON:0002405!1.38e-10!115;UBERON:0000178!1.26e-09!15;UBERON:0000179!1.26e-09!15;UBERON:0000463!1.26e-09!15;UBERON:0003081!3.24e-09!216;UBERON:0004765!4.64e-09!101;UBERON:0001434!4.64e-09!101;UBERON:0007023!7.68e-08!115;UBERON:0000926!8.62e-07!448;UBERON:0004120!8.62e-07!448;UBERON:0006603!8.62e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!5.55e-22!102;UBERON:0003061!5.55e-22!102;UBERON:0002193!8.72e-20!112;UBERON:0002371!2.42e-13!80;UBERON:0001474!1.89e-12!86;UBERON:0002405!1.38e-10!115;UBERON:0000178!1.26e-09!15;UBERON:0000179!1.26e-09!15;UBERON:0000463!1.26e-09!15;UBERON:0003081!3.24e-09!216;UBERON:0004765!4.64e-09!101;UBERON:0001434!4.64e-09!101;UBERON:0007023!7.68e-08!115;UBERON:0000926!8.62e-07!448;UBERON:0004120!8.62e-07!448;UBERON:0006603!8.62e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.59e-09;15!UBERON:0000179;2.59e-09;15!UBERON:0000463;2.59e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.59e-09;15!UBERON:0000179;2.59e-09;15!UBERON:0000463;2.59e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.82e-24,98;UBERON:0003061,6.82e-24,98;UBERON:0002193,2.42e-22,108;UBERON:0002371,2.55e-17,76;UBERON:0001474,1.58e-15,82;UBERON:0002405,2.40e-15,93;UBERON:0004765,1.62e-13,90;UBERON:0001434,1.81e-11,100;UBERON:0003081,9.25e-11,203;UBERON:0000178,2.06e-09,15;UBERON:0000179,2.06e-09,15;UBERON:0000463,2.06e-09,15 | |||
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| ||
|short_description=p2@LYPD2 | |short_description=p2@LYPD2 | ||
}} | }} |
Latest revision as of 21:21, 16 September 2015
Short description: | p2@LYPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LYPD2_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -9bp_to_ENST00000359228, NM_205545, uc003ywz.2_5end |
EntrezGene: | LYPD2 |
HGNC: | 25215 |
UniProt: | Q6UXB3F1T0L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.66e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-38 | 42 |
defensive cell | 1.68e-32 | 48 |
phagocyte | 1.68e-32 | 48 |
monopoietic cell | 2.07e-24 | 59 |
monocyte | 2.07e-24 | 59 |
monoblast | 2.07e-24 | 59 |
promonocyte | 2.07e-24 | 59 |
myeloid leukocyte | 5.03e-24 | 72 |
macrophage dendritic cell progenitor | 2.27e-23 | 61 |
myeloid lineage restricted progenitor cell | 4.80e-21 | 66 |
granulocyte monocyte progenitor cell | 1.27e-20 | 67 |
myeloid cell | 2.49e-13 | 108 |
common myeloid progenitor | 2.49e-13 | 108 |
nongranular leukocyte | 4.80e-13 | 115 |
leukocyte | 1.13e-12 | 136 |
intermediate monocyte | 1.26e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.26e-10 | 9 |
non-classical monocyte | 1.57e-09 | 3 |
CD14-low, CD16-positive monocyte | 1.57e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 2.57e-09 | 120 |
hematopoietic stem cell | 1.19e-08 | 168 |
basophil | 1.27e-08 | 3 |
single nucleate cell | 2.99e-08 | 3 |
mononuclear cell | 2.99e-08 | 3 |
hematopoietic cell | 8.43e-08 | 177 |
hematopoietic oligopotent progenitor cell | 3.35e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.82e-24 | 98 |
blood island | 6.82e-24 | 98 |
hemolymphoid system | 2.42e-22 | 108 |
bone marrow | 2.55e-17 | 76 |
bone element | 1.58e-15 | 82 |
immune system | 2.40e-15 | 93 |
skeletal element | 1.62e-13 | 90 |
skeletal system | 1.81e-11 | 100 |
lateral plate mesoderm | 9.25e-11 | 203 |
blood | 2.06e-09 | 15 |
haemolymphatic fluid | 2.06e-09 | 15 |
organism substance | 2.06e-09 | 15 |