FFCP PHASE1:Hg19::chr1:158985686..158985719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=223bp_to_ENST00000474473_5end | |association_with_transcript=223bp_to_ENST00000474473_5end | ||
|cluster_id=chr1:158985686..158985719,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_15_at_IFI16_5end | |description=CAGE_peak_15_at_IFI16_5end | ||
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|ontology_enrichment_celltype=CL:0000557!9.90e-13!71;CL:0000839!1.12e-12!70;CL:0002194!1.51e-12!63;CL:0000576!1.51e-12!63;CL:0000040!1.51e-12!63;CL:0000559!1.51e-12!63;CL:0002009!4.40e-12!65;CL:0002087!6.40e-12!119;CL:0002031!1.15e-11!124;CL:0000766!8.02e-11!76;CL:0000738!3.00e-10!140;CL:0002032!1.01e-07!165;CL:0000837!1.01e-07!165;CL:0002057!1.30e-07!42;CL:0000860!1.46e-07!45;CL:0000037!2.54e-07!172;CL:0000566!2.54e-07!172 | |ontology_enrichment_celltype=CL:0000557!9.90e-13!71;CL:0000839!1.12e-12!70;CL:0002194!1.51e-12!63;CL:0000576!1.51e-12!63;CL:0000040!1.51e-12!63;CL:0000559!1.51e-12!63;CL:0002009!4.40e-12!65;CL:0002087!6.40e-12!119;CL:0002031!1.15e-11!124;CL:0000766!8.02e-11!76;CL:0000738!3.00e-10!140;CL:0002032!1.01e-07!165;CL:0000837!1.01e-07!165;CL:0002057!1.30e-07!42;CL:0000860!1.46e-07!45;CL:0000037!2.54e-07!172;CL:0000566!2.54e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.67e-27;39!CL:0000234;4.67e-27;39!CL:0000860;1.93e-23;33!CL:0002057;1.93e-23;33!CL:0000576;1.86e-14;48!CL:0000235;2.68e-10;6!CL:0000766;7.18e-10;69!CL:0000763;4.50e-08;100 | |ontology_enrichment_celltype_v019=CL:0000473;4.67e-27;39!CL:0000234;4.67e-27;39!CL:0000860;1.93e-23;33!CL:0002057;1.93e-23;33!CL:0000576;1.86e-14;48!CL:0000235;2.68e-10;6!CL:0000766;7.18e-10;69!CL:0000763;4.50e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.01e-30,59;CL:0000576,5.01e-30,59;CL:0000040,5.01e-30,59;CL:0000559,5.01e-30,59;CL:0002009,7.44e-29,61;CL:0000473,1.40e-26,48;CL:0000234,1.40e-26,48;CL:0000839,3.11e-26,66;CL:0000557,9.34e-26,67;CL:0000766,1.45e-23,72;CL:0000860,2.98e-19,42;CL:0002057,2.98e-19,42;CL:0002087,3.55e-18,115;CL:0000763,1.39e-16,108;CL:0000049,1.39e-16,108;CL:0002031,9.01e-16,120;CL:0000738,2.53e-14,136;CL:0002032,3.58e-13,161;CL:0000837,3.58e-13,161;CL:0000037,2.50e-12,168;CL:0000988,2.42e-11,177;CL:0000235,2.33e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.04e-14;42!CL:0000049;2.85e-07;108 | |ontology_enrichment_development_v019=CL:0002057;4.04e-14;42!CL:0000049;2.85e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.66e-14!102;UBERON:0003061!2.66e-14!102;UBERON:0002193!1.64e-13!112;UBERON:0002371!1.07e-11!80;UBERON:0001474!2.91e-11!86;UBERON:0004765!1.59e-09!101;UBERON:0001434!1.59e-09!101;UBERON:0002405!1.80e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!2.66e-14!102;UBERON:0003061!2.66e-14!102;UBERON:0002193!1.64e-13!112;UBERON:0002371!1.07e-11!80;UBERON:0001474!2.91e-11!86;UBERON:0004765!1.59e-09!101;UBERON:0001434!1.59e-09!101;UBERON:0002405!1.80e-08!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.83e-24,76;UBERON:0001474,4.27e-24,82;UBERON:0004765,2.75e-23,90;UBERON:0002390,9.93e-21,98;UBERON:0003061,9.93e-21,98;UBERON:0001434,2.69e-20,100;UBERON:0002405,1.29e-18,93;UBERON:0002193,3.36e-18,108;UBERON:0002204,8.35e-15,167;UBERON:0003081,1.00e-12,203;UBERON:0000926,2.80e-07,315;UBERON:0004120,2.80e-07,315;UBERON:0006603,2.80e-07,315 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0.251085279189606,0.840547463227464,0.328402357799783,0.550975469195755,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0.647787332037959,0,0.872389432677388,1.88937971844405,0.970336244751265,0.464858073811369,0,0,8.91846416198666,9.73410684810582,8.51336027598907,0.689491361473237,0,0,0.941211697713023,0.818718450173537,0.898893937780338,1.22433556948361,1.28371610830437,1.27867425159808,12.8642007072819,10.9705011691898,8.52449501065388,1.7412554317715,0,0,9.2962006144995,11.9941071236646,7.16723187526885,1.81619850790011,0.368277635987565,0.632924774881769,0.422510572623884,0,0,0.22465726229299,0.150176892841506,1.12507910687956,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0.896639238079726,0.780356085359269,0.493313713811028,1.65810010671509,0.289803085735052,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0.759059076058509,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.649094787309367,0.522389211897802,1.32957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0.71153252537342,0.66944122552934,0,0,0.488124115096339,0.735326160691737,0,0.357198913136319,0.673588117878509,0.337834441449967,0,0,0.366403487860815,0,0,0,0.496971951695318,0.886413581652058,0.397227542439656,1.72101972449288,0,1.12135520028461,0,0.24666754841716,1.24484414159907,0.134710672069688,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.448346041655403,0.23486899728753,0.323745888736263,0.140450806702248,0,0.245668634623536,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0.213557388818567,0.423863802319124,0,0.206105058476878,0.515281080091258,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0.355009592516614,0,0.169560592310488,0.193260853163297,0.545492241181669,0,0,0,0,0.207322110030741,0,0.36497735907583,1.56449532329816,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.301586917234893,0.462942225792648,0.325808305310325,0,1.44331342025273,0,0,0.288732895522148,0,0,0,0,4.43190610957315,1.40402559083543,0.445893486866185,0,0.16798212819886,0.567100388969546,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,0.144119953416961,0.75745460055828,0.380987365753014,0.381988425558278,1.17217447210047,0,0.514137463516618,0.901029173531752,0.571652865261156,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,2.43247561282381,2.51128545716063,0,0,0,0,0.144781306667579,0.61642896765115,0,0.672510863961164,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0.335032530668698,0.637938751653163,0,0,0.828831026872071,0.12269149171914,1.50051156317903,0.271265023699736,1.03985430765404,0.713715955188647,0.473107245101804,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.40101294060657,0.276242966807689,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0,0,0,0,0.290012154876366,0.462145851343933,0.15350367472613,0.413509717453592,0,0.870100163485371,0.426133137080504,0.0890320356467374,0.330569830721956,0.384380134730212,0.127612712494584,0.6069466851333,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0.372158369359667,0,0,0,1.71175595213568,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,1.46228093778771,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.987884678879706,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,1.11481905075431,0,0.142283686696828,0.318852545457645,1.79621434289535,0,1.05836791361941,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.50787533340481,0,0,0,0,1.53620382154229,2.01308497103174,1.66849141711908,0.586164286206121,0.556812347790485,0,0,0.33307196799782,0,0.561421621224659,0.293016358543788,0,0.557216921387392,0,0,0.296964680832639,0,0.994147647766298,0,0.111308705022906,2.14245036494787,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.08986835114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| ||
|short_description=p15@IFI16 | |short_description=p15@IFI16 | ||
}} | }} |
Latest revision as of 22:06, 17 September 2015
Short description: | p15@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_IFI16_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 223bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.01e-30 | 59 |
monocyte | 5.01e-30 | 59 |
monoblast | 5.01e-30 | 59 |
promonocyte | 5.01e-30 | 59 |
macrophage dendritic cell progenitor | 7.44e-29 | 61 |
defensive cell | 1.40e-26 | 48 |
phagocyte | 1.40e-26 | 48 |
myeloid lineage restricted progenitor cell | 3.11e-26 | 66 |
granulocyte monocyte progenitor cell | 9.34e-26 | 67 |
myeloid leukocyte | 1.45e-23 | 72 |
classical monocyte | 2.98e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.98e-19 | 42 |
nongranular leukocyte | 3.55e-18 | 115 |
myeloid cell | 1.39e-16 | 108 |
common myeloid progenitor | 1.39e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 9.01e-16 | 120 |
leukocyte | 2.53e-14 | 136 |
hematopoietic oligopotent progenitor cell | 3.58e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.58e-13 | 161 |
hematopoietic stem cell | 2.50e-12 | 168 |
hematopoietic cell | 2.42e-11 | 177 |
macrophage | 2.33e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.83e-24 | 76 |
bone element | 4.27e-24 | 82 |
skeletal element | 2.75e-23 | 90 |
hematopoietic system | 9.93e-21 | 98 |
blood island | 9.93e-21 | 98 |
skeletal system | 2.69e-20 | 100 |
immune system | 1.29e-18 | 93 |
hemolymphoid system | 3.36e-18 | 108 |
musculoskeletal system | 8.35e-15 | 167 |
lateral plate mesoderm | 1.00e-12 | 203 |
mesoderm | 2.80e-07 | 315 |
mesoderm-derived structure | 2.80e-07 | 315 |
presumptive mesoderm | 2.80e-07 | 315 |