FFCP PHASE1:Hg19::chr3:46395543..46395554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729230 | |EntrezGene=729230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |HGNC=1603 | ||
|TSSclassifier=strong | |||
|UniProt=E9PH76 | |UniProt=E9PH76 | ||
|association_with_transcript=-62bp_to_ENST00000421659_5end | |association_with_transcript=-62bp_to_ENST00000421659_5end | ||
|cluster_id=chr3:46395543..46395554,+ | |||
|coexpression_cluster_id=C4331 | |coexpression_cluster_id=C4331 | ||
|description=CAGE_peak_6_at_CCR2_5end | |description=CAGE_peak_6_at_CCR2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!4.43e-25!42;CL:0002194!1.27e-24!63;CL:0000576!1.27e-24!63;CL:0000040!1.27e-24!63;CL:0000559!1.27e-24!63;CL:0002009!1.27e-23!65;CL:0000860!5.84e-23!45;CL:0000766!2.70e-22!76;CL:0000839!2.29e-21!70;CL:0000763!2.99e-21!112;CL:0000049!2.99e-21!112;CL:0000557!5.93e-21!71;CL:0000037!9.27e-16!172;CL:0000566!9.27e-16!172;CL:0002087!1.58e-15!119;CL:0000988!2.90e-14!182;CL:0002032!6.40e-14!165;CL:0000837!6.40e-14!165;CL:0000738!9.48e-14!140;CL:0002031!1.80e-11!124;CL:0000842!7.47e-08!3 | |ontology_enrichment_celltype=CL:0002057!4.43e-25!42;CL:0002194!1.27e-24!63;CL:0000576!1.27e-24!63;CL:0000040!1.27e-24!63;CL:0000559!1.27e-24!63;CL:0002009!1.27e-23!65;CL:0000860!5.84e-23!45;CL:0000766!2.70e-22!76;CL:0000839!2.29e-21!70;CL:0000763!2.99e-21!112;CL:0000049!2.99e-21!112;CL:0000557!5.93e-21!71;CL:0000037!9.27e-16!172;CL:0000566!9.27e-16!172;CL:0002087!1.58e-15!119;CL:0000988!2.90e-14!182;CL:0002032!6.40e-14!165;CL:0000837!6.40e-14!165;CL:0000738!9.48e-14!140;CL:0002031!1.80e-11!124;CL:0000842!7.47e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000576;5.47e-12;48!CL:0000860;2.45e-09;33!CL:0002057;2.45e-09;33!CL:0000763;4.12e-08;100!CL:0000473;8.82e-08;39!CL:0000234;8.82e-08;39 | |ontology_enrichment_celltype_v019=CL:0000576;5.47e-12;48!CL:0000860;2.45e-09;33!CL:0002057;2.45e-09;33!CL:0000763;4.12e-08;100!CL:0000473;8.82e-08;39!CL:0000234;8.82e-08;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.39e-14,59;CL:0000576,7.39e-14,59;CL:0000040,7.39e-14,59;CL:0000559,7.39e-14,59;CL:0002009,2.38e-13,61;CL:0000763,2.89e-13,108;CL:0000049,2.89e-13,108;CL:0000766,3.19e-13,72;CL:0000839,3.26e-12,66;CL:0000557,5.25e-12,67;CL:0000860,9.02e-11,42;CL:0002057,9.02e-11,42;CL:0000037,4.41e-10,168;CL:0000988,2.06e-09,177;CL:0000473,2.74e-09,48;CL:0000234,2.74e-09,48;CL:0002032,2.79e-09,161;CL:0000837,2.79e-09,161;CL:0002087,6.13e-09,115;CL:0000738,1.70e-08,136;CL:0002031,3.91e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.52e-08;42!CL:0000049;1.87e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.52e-08;42!CL:0000049;1.87e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;3.75e-08;31 | |ontology_enrichment_disease_v019=DOID:8692;3.75e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,1.22e-08,31;DOID:1240,9.27e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.39e-35!102;UBERON:0003061!3.39e-35!102;UBERON:0002193!2.75e-34!112;UBERON:0000178!1.40e-22!15;UBERON:0000179!1.40e-22!15;UBERON:0000463!1.40e-22!15;UBERON:0002371!1.04e-17!80;UBERON:0002405!4.91e-16!115;UBERON:0001474!6.26e-16!86;UBERON:0004765!1.97e-12!101;UBERON:0001434!1.97e-12!101;UBERON:0003081!6.32e-12!216;UBERON:0007023!1.75e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!3.39e-35!102;UBERON:0003061!3.39e-35!102;UBERON:0002193!2.75e-34!112;UBERON:0000178!1.40e-22!15;UBERON:0000179!1.40e-22!15;UBERON:0000463!1.40e-22!15;UBERON:0002371!1.04e-17!80;UBERON:0002405!4.91e-16!115;UBERON:0001474!6.26e-16!86;UBERON:0004765!1.97e-12!101;UBERON:0001434!1.97e-12!101;UBERON:0003081!6.32e-12!216;UBERON:0007023!1.75e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.24e-40;15!UBERON:0000179;6.24e-40;15!UBERON:0000463;6.24e-40;15!UBERON:0002390;1.57e-16;32!UBERON:0002193;7.08e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.24e-40;15!UBERON:0000179;6.24e-40;15!UBERON:0000463;6.24e-40;15!UBERON:0002390;1.57e-16;32!UBERON:0002193;7.08e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.26e-40,15;UBERON:0000179,6.26e-40,15;UBERON:0000463,6.26e-40,15;UBERON:0002390,1.08e-27,98;UBERON:0003061,1.08e-27,98;UBERON:0002193,7.88e-25,108;UBERON:0003081,1.38e-11,203;UBERON:0002371,2.20e-10,76;UBERON:0001474,1.69e-09,82;UBERON:0004765,1.69e-08,90;UBERON:0002405,3.62e-08,93;UBERON:0001434,1.79e-07,100 | |||
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| ||
|short_description=p6@CCR2 | |short_description=p6@CCR2 | ||
}} | }} |
Latest revision as of 10:38, 18 September 2015
Short description: | p6@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCR2_5end |
Coexpression cluster: | C4331_CD14_acute_Whole_blood_CD4_biphenotypic_CD19 |
Association with transcript: | -62bp_to_ENST00000421659_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | E9PH76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.39e-14 | 59 |
monocyte | 7.39e-14 | 59 |
monoblast | 7.39e-14 | 59 |
promonocyte | 7.39e-14 | 59 |
macrophage dendritic cell progenitor | 2.38e-13 | 61 |
myeloid cell | 2.89e-13 | 108 |
common myeloid progenitor | 2.89e-13 | 108 |
myeloid leukocyte | 3.19e-13 | 72 |
myeloid lineage restricted progenitor cell | 3.26e-12 | 66 |
granulocyte monocyte progenitor cell | 5.25e-12 | 67 |
classical monocyte | 9.02e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.02e-11 | 42 |
hematopoietic stem cell | 4.41e-10 | 168 |
hematopoietic cell | 2.06e-09 | 177 |
defensive cell | 2.74e-09 | 48 |
phagocyte | 2.74e-09 | 48 |
hematopoietic oligopotent progenitor cell | 2.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-09 | 161 |
nongranular leukocyte | 6.13e-09 | 115 |
leukocyte | 1.70e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 3.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 6.26e-40 | 15 |
haemolymphatic fluid | 6.26e-40 | 15 |
organism substance | 6.26e-40 | 15 |
hematopoietic system | 1.08e-27 | 98 |
blood island | 1.08e-27 | 98 |
hemolymphoid system | 7.88e-25 | 108 |
lateral plate mesoderm | 1.38e-11 | 203 |
bone marrow | 2.20e-10 | 76 |
bone element | 1.69e-09 | 82 |
skeletal element | 1.69e-08 | 90 |
immune system | 3.62e-08 | 93 |
skeletal system | 1.79e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.22e-08 | 31 |
leukemia | 9.27e-07 | 39 |