FFCP PHASE1:Hg19::chr1:92949213..92949223,-: Difference between revisions
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|id=chr1:92949213..92949223,-
|short_description=p9@GFI1
|description=CAGE_peak_9_at_GFI1_5end
|association_with_transcript=-125bp_to_BC074866,BC074867_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=Q99684 | |UniProt=Q99684 | ||
|association_with_transcript=-125bp_to_BC074866,BC074867_5end | |||
|cluster_id=chr1:92949213..92949223,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_9_at_GFI1_5end | |||
|id=chr1:92949213..92949223,- | |||
|ontology_enrichment_celltype=CL:0000784!9.42e-12!3;CL:0000242!9.55e-09!2;CL:0000037!6.80e-07!172;CL:0000566!6.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.03e-45;2!CL:0000242;2.03e-45;2!CL:0000784;4.83e-30;3!CL:0000312;7.24e-19;5!CL:0000240;6.71e-16;6!CL:0000311;6.71e-16;6!CL:0000079;6.71e-16;6!CL:0000237;6.71e-16;6!CL:0000362;6.22e-11;9!CL:0000451;6.10e-09;10!CL:0002159;2.36e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.04e-45,2;CL:0000784,6.50e-30,3;CL:0000312,7.24e-19,5;CL:0000240,6.71e-16,6;CL:0000311,6.71e-16,6;CL:0000079,6.71e-16,6;CL:0000237,6.71e-16,6;CL:0000036,6.71e-16,6;CL:0000357,6.71e-16,6;CL:0000114,6.71e-16,6;CL:0000362,6.22e-11,9;CL:0000451,6.61e-09,10;CL:0002159,2.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;6.71e-16;6!CL:0000114;6.71e-16;6 | |||
|ontology_enrichment_disease=DOID:8692!2.29e-09!31;DOID:1240!1.37e-08!39;DOID:74!2.37e-07!2;DOID:2531!3.38e-07!51;DOID:0060083!3.38e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.61e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.19e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.40e-07;15!UBERON:0007376;6.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.40e-07,15;UBERON:0007376,6.40e-07,15;UBERON:0007383,6.40e-07,15 | |||
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| ||
|short_description=p9@GFI1 | |||
}} | }} |
Latest revision as of 20:28, 19 September 2015
Short description: | p9@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GFI1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -125bp_to_BC074866, BC074867_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.04e-45 | 2 |
plasmacytoid dendritic cell | 6.50e-30 | 3 |
keratinocyte | 7.24e-19 | 5 |
stratified squamous epithelial cell | 6.71e-16 | 6 |
keratin accumulating cell | 6.71e-16 | 6 |
stratified epithelial cell | 6.71e-16 | 6 |
keratinizing barrier epithelial cell | 6.71e-16 | 6 |
epithelial fate stem cell | 6.71e-16 | 6 |
stratified epithelial stem cell | 6.71e-16 | 6 |
surface ectodermal cell | 6.71e-16 | 6 |
epidermal cell | 6.22e-11 | 9 |
dendritic cell | 6.61e-09 | 10 |
general ecto-epithelial cell | 2.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.40e-07 | 15 |
outer epithelium | 6.40e-07 | 15 |
enveloping layer of ectoderm | 6.40e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.61e-07 | 4 |