FFCP PHASE1:Hg19::chr19:40675597..40675603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:40675597..40675603,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr19:40675597..40675603,- | |description=CAGE_peak_at_chr19:40675597..40675603,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!4.81e-07!254 | |ontology_enrichment_celltype=CL:0000066!4.81e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.61e-13;1!CL:0000159;2.12e-07;2 | |ontology_enrichment_celltype_v019=CL:0000319;1.61e-13;1!CL:0000159;2.12e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.25e-13,1;CL:0000159,1.87e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.18e-30!235;DOID:14566!4.61e-29!239;DOID:0050687!1.62e-27!143;DOID:305!2.45e-24!106;DOID:0050686!8.35e-12!137;DOID:1324!2.66e-08!15;DOID:1036!2.87e-08!8;DOID:0050615!1.22e-07!16;DOID:1749!5.04e-07!14 | |ontology_enrichment_disease=DOID:162!3.18e-30!235;DOID:14566!4.61e-29!239;DOID:0050687!1.62e-27!143;DOID:305!2.45e-24!106;DOID:0050686!8.35e-12!137;DOID:1324!2.66e-08!15;DOID:1036!2.87e-08!8;DOID:0050615!1.22e-07!16;DOID:1749!5.04e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.05e-39;8!DOID:3030;1.61e-13;1!DOID:8692;4.67e-10;31!DOID:1240;3.22e-08;39!DOID:3910;9.86e-08;2 | |ontology_enrichment_disease_v019=DOID:1036;6.05e-39;8!DOID:3030;1.61e-13;1!DOID:8692;4.67e-10;31!DOID:1240;3.22e-08;39!DOID:3910;9.86e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,5.60e-39,8;DOID:3030,1.25e-13,1;DOID:8692,4.49e-10,31;DOID:1240,5.46e-08,39;DOID:3910,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.37e-08!82;UBERON:0001007!4.42e-08!155;UBERON:0001555!4.42e-08!155;UBERON:0007026!4.42e-08!155;UBERON:0000077!2.00e-07!130;UBERON:0004921!2.06e-07!129;UBERON:0004185!2.06e-07!129;UBERON:0004807!3.28e-07!28;UBERON:0001041!4.31e-07!98 | |ontology_enrichment_uberon=UBERON:0005911!1.37e-08!82;UBERON:0001007!4.42e-08!155;UBERON:0001555!4.42e-08!155;UBERON:0007026!4.42e-08!155;UBERON:0000077!2.00e-07!130;UBERON:0004921!2.06e-07!129;UBERON:0004185!2.06e-07!129;UBERON:0004807!3.28e-07!28;UBERON:0001041!4.31e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.86e-08;2!UBERON:0002173;9.86e-08;2!UBERON:0002186;9.86e-08;2!UBERON:0000473;3.39e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004903;9.86e-08;2!UBERON:0002173;9.86e-08;2!UBERON:0002186;9.86e-08;2!UBERON:0000473;3.39e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.87e-08,2;UBERON:0002173,9.87e-08,2;UBERON:0002186,9.87e-08,2;UBERON:0000473,3.34e-07,8 | |||
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| ||
|short_description=p@chr19:40675597..40675603,- | |short_description=p@chr19:40675597..40675603,- | ||
}} | }} |
Latest revision as of 07:47, 26 July 2015
Short description: | p@chr19:40675597..40675603, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:40675597..40675603, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.25e-13 | 1 |
seromucus secreting cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.87e-08 | 2 |
alveolar duct | 9.87e-08 | 2 |
bronchiole | 9.87e-08 | 2 |
testis | 3.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.60e-39 | 8 |
mucinous adenocarcinoma | 1.25e-13 | 1 |
myeloid leukemia | 4.49e-10 | 31 |
leukemia | 5.46e-08 | 39 |
lung adenocarcinoma | 9.87e-08 | 2 |