FFCP PHASE1:Hg19::chr10:90988035..90988053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90988035..90988053,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:90988035..90988053,- | |description=CAGE_peak_at_chr10:90988035..90988053,- | ||
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|ontology_enrichment_celltype=CL:0002194!1.08e-12!63;CL:0000576!1.08e-12!63;CL:0000040!1.08e-12!63;CL:0000559!1.08e-12!63;CL:0002009!5.13e-12!65;CL:0000839!2.94e-11!70;CL:0000557!5.74e-11!71;CL:0000766!2.05e-10!76;CL:0000235!1.13e-08!10 | |ontology_enrichment_celltype=CL:0002194!1.08e-12!63;CL:0000576!1.08e-12!63;CL:0000040!1.08e-12!63;CL:0000559!1.08e-12!63;CL:0002009!5.13e-12!65;CL:0000839!2.94e-11!70;CL:0000557!5.74e-11!71;CL:0000766!2.05e-10!76;CL:0000235!1.13e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.18e-78;6!CL:0000840;4.86e-21;5!CL:0000511;1.84e-14;1!CL:0002625;1.84e-14;1!CL:0000216;1.84e-14;1!CL:0000990;3.03e-14;8!CL:0000451;9.19e-12;10!CL:0000473;2.38e-10;39!CL:0000234;2.38e-10;39 | |ontology_enrichment_celltype_v019=CL:0000235;2.18e-78;6!CL:0000840;4.86e-21;5!CL:0000511;1.84e-14;1!CL:0002625;1.84e-14;1!CL:0000216;1.84e-14;1!CL:0000990;3.03e-14;8!CL:0000451;9.19e-12;10!CL:0000473;2.38e-10;39!CL:0000234;2.38e-10;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.19e-78,6;CL:0000840,4.86e-21,5;CL:0001029,4.86e-21,5;CL:0002194,4.23e-17,59;CL:0000576,4.23e-17,59;CL:0000040,4.23e-17,59;CL:0000559,4.23e-17,59;CL:0002009,1.61e-16,61;CL:0000839,3.23e-15,66;CL:0000557,5.57e-15,67;CL:0000511,1.84e-14,1;CL:0002625,1.84e-14,1;CL:0000216,1.84e-14,1;CL:0000990,3.03e-14,8;CL:0000766,6.86e-14,72;CL:0000451,9.19e-12,10;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0000763,5.61e-09,108;CL:0000049,5.61e-09,108;CL:0002087,2.25e-08,115;CL:0002031,5.50e-08,120;CL:0000738,6.24e-07,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.94e-18;3!DOID:127;1.94e-18;3!DOID:0060072;4.40e-14;4 | |ontology_enrichment_disease_v019=DOID:0060084;1.94e-18;3!DOID:127;1.94e-18;3!DOID:0060072;4.40e-14;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.94e-18,3;DOID:127,1.94e-18,3;DOID:0060072,4.40e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-09!80;UBERON:0001474!3.62e-08!86;UBERON:0002204!4.94e-08!167;UBERON:0004765!4.97e-08!101;UBERON:0001434!4.97e-08!101;UBERON:0002193!5.50e-08!112;UBERON:0002390!1.07e-07!102;UBERON:0003061!1.07e-07!102;UBERON:0002405!2.07e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!1.87e-09!80;UBERON:0001474!3.62e-08!86;UBERON:0002204!4.94e-08!167;UBERON:0004765!4.97e-08!101;UBERON:0001434!4.97e-08!101;UBERON:0002193!5.50e-08!112;UBERON:0002390!1.07e-07!102;UBERON:0003061!1.07e-07!102;UBERON:0002405!2.07e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.84e-14;1!UBERON:0001343;1.84e-14;1!UBERON:0004910;1.84e-14;1!UBERON:0004813;1.84e-14;1!UBERON:0004909;7.03e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001136;1.84e-14;1!UBERON:0001343;1.84e-14;1!UBERON:0004910;1.84e-14;1!UBERON:0004813;1.84e-14;1!UBERON:0004909;7.03e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.84e-14,1;UBERON:0001343,1.84e-14,1;UBERON:0004910,1.84e-14,1;UBERON:0005154,1.84e-14,1;UBERON:0005295,1.84e-14,1;UBERON:0004813,1.84e-14,1;UBERON:0005297,1.84e-14,1;UBERON:0005294,1.84e-14,1;UBERON:0010141,1.84e-14,1;UBERON:0005891,1.84e-14,1;UBERON:0002371,4.05e-13,76;UBERON:0001474,4.22e-12,82;UBERON:0004765,5.95e-11,90;UBERON:0002405,1.43e-10,93;UBERON:0002390,5.49e-10,98;UBERON:0003061,5.49e-10,98;UBERON:0001434,9.07e-10,100;UBERON:0002193,5.61e-09,108;UBERON:0004909,7.03e-08,2;UBERON:0002204,8.24e-07,167 | |||
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|short_description=p@chr10:90988035..90988053,- | |short_description=p@chr10:90988035..90988053,- | ||
}} | }} |
Latest revision as of 16:34, 23 July 2015
Short description: | p@chr10:90988035..90988053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90988035..90988053, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.19e-78 | 6 |
immature conventional dendritic cell | 4.86e-21 | 5 |
common dendritic progenitor | 4.86e-21 | 5 |
monopoietic cell | 4.23e-17 | 59 |
monocyte | 4.23e-17 | 59 |
monoblast | 4.23e-17 | 59 |
promonocyte | 4.23e-17 | 59 |
macrophage dendritic cell progenitor | 1.61e-16 | 61 |
myeloid lineage restricted progenitor cell | 3.23e-15 | 66 |
granulocyte monocyte progenitor cell | 5.57e-15 | 67 |
androgen binding protein secreting cell | 1.84e-14 | 1 |
seminiferous tubule epithelial cell | 1.84e-14 | 1 |
Sertoli cell | 1.84e-14 | 1 |
conventional dendritic cell | 3.03e-14 | 8 |
myeloid leukocyte | 6.86e-14 | 72 |
dendritic cell | 9.19e-12 | 10 |
defensive cell | 1.17e-09 | 48 |
phagocyte | 1.17e-09 | 48 |
myeloid cell | 5.61e-09 | 108 |
common myeloid progenitor | 5.61e-09 | 108 |
nongranular leukocyte | 2.25e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.50e-08 | 120 |
leukocyte | 6.24e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.84e-14 | 1 |
seminiferous tubule of testis | 1.84e-14 | 1 |
epithelium of male gonad | 1.84e-14 | 1 |
epithelial cord | 1.84e-14 | 1 |
sex cord | 1.84e-14 | 1 |
seminiferous tubule epithelium | 1.84e-14 | 1 |
testis sex cord | 1.84e-14 | 1 |
genital ridge | 1.84e-14 | 1 |
primitive sex cord of indifferent gonad | 1.84e-14 | 1 |
coelomic epithelium | 1.84e-14 | 1 |
bone marrow | 4.05e-13 | 76 |
bone element | 4.22e-12 | 82 |
skeletal element | 5.95e-11 | 90 |
immune system | 1.43e-10 | 93 |
hematopoietic system | 5.49e-10 | 98 |
blood island | 5.49e-10 | 98 |
skeletal system | 9.07e-10 | 100 |
hemolymphoid system | 5.61e-09 | 108 |
epithelium of gonad | 7.03e-08 | 2 |
musculoskeletal system | 8.24e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.94e-18 | 3 |
leiomyoma | 1.94e-18 | 3 |
benign neoplasm | 4.40e-14 | 4 |