FFCP PHASE1:Hg19::chr3:196065341..196065356,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116211 | |EntrezGene=116211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25167 | |HGNC=25167 | ||
|TSSclassifier=strong | |||
|UniProt=E9PH22 | |UniProt=E9PH22 | ||
|association_with_transcript=17bp_to_ENST00000454715_5end | |association_with_transcript=17bp_to_ENST00000454715_5end | ||
|cluster_id=chr3:196065341..196065356,- | |||
|coexpression_cluster_id=C3462 | |coexpression_cluster_id=C3462 | ||
|description=CAGE_peak_4_at_TM4SF19_5end | |description=CAGE_peak_4_at_TM4SF19_5end | ||
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|ontology_enrichment_celltype=CL:0002194!2.41e-40!63;CL:0000576!2.41e-40!63;CL:0000040!2.41e-40!63;CL:0000559!2.41e-40!63;CL:0002009!1.32e-38!65;CL:0000839!1.07e-34!70;CL:0000557!5.54e-34!71;CL:0000766!6.54e-34!76;CL:0000860!3.43e-32!45;CL:0002057!1.45e-31!42;CL:0000763!1.14e-21!112;CL:0000049!1.14e-21!112;CL:0002087!1.22e-18!119;CL:0002031!2.27e-16!124;CL:0000738!4.11e-15!140;CL:0002032!2.78e-12!165;CL:0000837!2.78e-12!165;CL:0000037!9.00e-12!172;CL:0000566!9.00e-12!172;CL:0000988!8.19e-11!182;CL:0000063!2.49e-10!578;CL:0000235!4.33e-09!10;CL:0000548!2.31e-08!679;CL:0000004!2.31e-08!679;CL:0000255!2.31e-08!679;CL:0000012!3.65e-08!682 | |ontology_enrichment_celltype=CL:0002194!2.41e-40!63;CL:0000576!2.41e-40!63;CL:0000040!2.41e-40!63;CL:0000559!2.41e-40!63;CL:0002009!1.32e-38!65;CL:0000839!1.07e-34!70;CL:0000557!5.54e-34!71;CL:0000766!6.54e-34!76;CL:0000860!3.43e-32!45;CL:0002057!1.45e-31!42;CL:0000763!1.14e-21!112;CL:0000049!1.14e-21!112;CL:0002087!1.22e-18!119;CL:0002031!2.27e-16!124;CL:0000738!4.11e-15!140;CL:0002032!2.78e-12!165;CL:0000837!2.78e-12!165;CL:0000037!9.00e-12!172;CL:0000566!9.00e-12!172;CL:0000988!8.19e-11!182;CL:0000063!2.49e-10!578;CL:0000235!4.33e-09!10;CL:0000548!2.31e-08!679;CL:0000004!2.31e-08!679;CL:0000255!2.31e-08!679;CL:0000012!3.65e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.62e-92;39!CL:0000234;4.62e-92;39!CL:0000860;6.26e-89;33!CL:0002057;6.26e-89;33!CL:0000576;5.41e-43;48!CL:0000766;6.16e-33;69!CL:0000235;4.24e-24;6!CL:0000763;1.36e-16;100!CL:0002087;2.26e-11;104!CL:0000738;6.67e-10;136 | |ontology_enrichment_celltype_v019=CL:0000473;4.62e-92;39!CL:0000234;4.62e-92;39!CL:0000860;6.26e-89;33!CL:0002057;6.26e-89;33!CL:0000576;5.41e-43;48!CL:0000766;6.16e-33;69!CL:0000235;4.24e-24;6!CL:0000763;1.36e-16;100!CL:0002087;2.26e-11;104!CL:0000738;6.67e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.07e-96,48;CL:0000234,1.07e-96,48;CL:0002194,1.32e-84,59;CL:0000576,1.32e-84,59;CL:0000040,1.32e-84,59;CL:0000559,1.32e-84,59;CL:0002009,1.39e-81,61;CL:0000860,3.63e-75,42;CL:0002057,3.63e-75,42;CL:0000839,8.13e-75,66;CL:0000557,1.39e-73,67;CL:0000766,6.43e-68,72;CL:0000763,1.79e-42,108;CL:0000049,1.79e-42,108;CL:0002087,8.77e-42,115;CL:0002031,1.13e-39,120;CL:0000738,5.88e-34,136;CL:0002032,2.75e-27,161;CL:0000837,2.75e-27,161;CL:0000037,8.95e-26,168;CL:0000235,3.85e-24,6;CL:0000988,5.27e-24,177;CL:0000134,1.40e-09,354;CL:0000219,2.49e-09,386;CL:0002320,3.27e-09,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-56;42!CL:0000049;1.38e-14;108 | |ontology_enrichment_development_v019=CL:0002057;2.63e-56;42!CL:0000049;1.38e-14;108 | ||
|ontology_enrichment_disease=DOID:305!9.73e-09!106 | |ontology_enrichment_disease=DOID:305!9.73e-09!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.25e-28!80;UBERON:0001474!2.64e-25!86;UBERON:0002390!3.76e-21!102;UBERON:0003061!3.76e-21!102;UBERON:0004765!2.00e-20!101;UBERON:0001434!2.00e-20!101;UBERON:0002405!5.21e-20!115;UBERON:0002193!7.37e-20!112;UBERON:0002204!1.58e-09!167;UBERON:0000062!2.22e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!2.25e-28!80;UBERON:0001474!2.64e-25!86;UBERON:0002390!3.76e-21!102;UBERON:0003061!3.76e-21!102;UBERON:0004765!2.00e-20!101;UBERON:0001434!2.00e-20!101;UBERON:0002405!5.21e-20!115;UBERON:0002193!7.37e-20!112;UBERON:0002204!1.58e-09!167;UBERON:0000062!2.22e-07!511 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.45e-64,76;UBERON:0001474,1.23e-58,82;UBERON:0002405,1.37e-53,93;UBERON:0004765,1.11e-52,90;UBERON:0002390,1.10e-47,98;UBERON:0003061,1.10e-47,98;UBERON:0001434,1.46e-46,100;UBERON:0002193,6.13e-45,108;UBERON:0002204,2.32e-24,167;UBERON:0003081,1.81e-18,203;UBERON:0000926,1.61e-09,315;UBERON:0004120,1.61e-09,315;UBERON:0006603,1.61e-09,315;UBERON:0002384,1.03e-08,371 | |||
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| ||
|short_description=p4@TM4SF19 | |short_description=p4@TM4SF19 | ||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p4@TM4SF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TM4SF19_5end |
Coexpression cluster: | C3462_Monocytederived_CD14_Macrophage_extraskeletal_schwannoma_Dendritic_Osteoblast |
Association with transcript: | 17bp_to_ENST00000454715_5end |
EntrezGene: | TM4SF19 |
HGNC: | 25167 |
UniProt: | E9PH22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.07e-96 | 48 |
phagocyte | 1.07e-96 | 48 |
monopoietic cell | 1.32e-84 | 59 |
monocyte | 1.32e-84 | 59 |
monoblast | 1.32e-84 | 59 |
promonocyte | 1.32e-84 | 59 |
macrophage dendritic cell progenitor | 1.39e-81 | 61 |
classical monocyte | 3.63e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-75 | 42 |
myeloid lineage restricted progenitor cell | 8.13e-75 | 66 |
granulocyte monocyte progenitor cell | 1.39e-73 | 67 |
myeloid leukocyte | 6.43e-68 | 72 |
myeloid cell | 1.79e-42 | 108 |
common myeloid progenitor | 1.79e-42 | 108 |
nongranular leukocyte | 8.77e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-39 | 120 |
leukocyte | 5.88e-34 | 136 |
hematopoietic oligopotent progenitor cell | 2.75e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.75e-27 | 161 |
hematopoietic stem cell | 8.95e-26 | 168 |
macrophage | 3.85e-24 | 6 |
hematopoietic cell | 5.27e-24 | 177 |
mesenchymal cell | 1.40e-09 | 354 |
motile cell | 2.49e-09 | 386 |
connective tissue cell | 3.27e-09 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.45e-64 | 76 |
bone element | 1.23e-58 | 82 |
immune system | 1.37e-53 | 93 |
skeletal element | 1.11e-52 | 90 |
hematopoietic system | 1.10e-47 | 98 |
blood island | 1.10e-47 | 98 |
skeletal system | 1.46e-46 | 100 |
hemolymphoid system | 6.13e-45 | 108 |
musculoskeletal system | 2.32e-24 | 167 |
lateral plate mesoderm | 1.81e-18 | 203 |
mesoderm | 1.61e-09 | 315 |
mesoderm-derived structure | 1.61e-09 | 315 |
presumptive mesoderm | 1.61e-09 | 315 |
connective tissue | 1.03e-08 | 371 |