FFCP PHASE1:Hg19::chr20:23331500..23331522,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:23331500..23331522,+
|short_description=p2@NXT1
|description=CAGE_peak_2_at_NXT1_5end
|association_with_transcript=127bp_to_ENST00000254998,NM_013248,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29107 | |EntrezGene=29107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15913 | |HGNC=15913 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKK6 | |UniProt=Q9UKK6 | ||
|association_with_transcript=127bp_to_ENST00000254998,NM_013248,uc002wsx.1_5end | |||
|cluster_id=chr20:23331500..23331522,+ | |||
|coexpression_cluster_id=C3640 | |||
|description=CAGE_peak_2_at_NXT1_5end | |||
|id=chr20:23331500..23331522,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.09e-41!140;CL:0000988!4.48e-36!182;CL:0000037!1.14e-35!172;CL:0000566!1.14e-35!172;CL:0002032!1.64e-32!165;CL:0000837!1.64e-32!165;CL:0002031!2.82e-30!124;CL:0002087!7.27e-30!119;CL:0002057!4.40e-21!42;CL:0000766!1.09e-20!76;CL:0000860!1.12e-18!45;CL:0000763!9.47e-18!112;CL:0000049!9.47e-18!112;CL:0000557!1.14e-17!71;CL:0000063!1.29e-15!578;CL:0002009!4.39e-15!65;CL:0000839!1.17e-14!70;CL:0000838!1.94e-14!52;CL:0000542!3.53e-14!53;CL:0000051!3.53e-14!53;CL:0002194!4.99e-14!63;CL:0000576!4.99e-14!63;CL:0000040!4.99e-14!63;CL:0000559!4.99e-14!63;CL:0000003!5.38e-12!722;CL:0000134!5.20e-11!358;CL:0000012!6.66e-11!682;CL:0000548!8.53e-10!679;CL:0000004!8.53e-10!679;CL:0000255!8.53e-10!679;CL:0002320!1.20e-09!365;CL:0000945!1.66e-09!24;CL:0000826!1.66e-09!24;CL:0000219!1.99e-09!390;CL:0002371!1.09e-08!591;CL:0000144!1.94e-08!625;CL:0000094!8.92e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-17;33!CL:0002057;1.66e-17;33!CL:0000473;1.72e-14;39!CL:0000234;1.72e-14;39!CL:0000766;3.01e-13;69!CL:0000576;3.70e-13;48!CL:0000945;4.13e-11;24!CL:0002087;5.44e-11;104!CL:0000738;1.05e-10;136!CL:0000542;1.29e-09;53!CL:0000094;5.67e-08;8!CL:0000988;1.02e-07;177!CL:0000763;4.94e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.92e-50,136;CL:0000988,1.26e-43,177;CL:0000037,1.77e-43,168;CL:0002032,1.03e-39,161;CL:0000837,1.03e-39,161;CL:0002031,1.83e-38,120;CL:0002087,5.32e-37,115;CL:0000766,2.58e-27,72;CL:0000860,2.45e-25,42;CL:0002057,2.45e-25,42;CL:0000473,7.87e-25,48;CL:0000234,7.87e-25,48;CL:0000557,1.82e-23,67;CL:0000763,1.12e-22,108;CL:0000049,1.12e-22,108;CL:0002009,3.43e-20,61;CL:0000839,4.76e-20,66;CL:0002194,7.79e-19,59;CL:0000576,7.79e-19,59;CL:0000040,7.79e-19,59;CL:0000559,7.79e-19,59;CL:0000838,2.24e-16,52;CL:0000542,1.05e-15,53;CL:0000051,1.05e-15,53;CL:0000134,6.49e-13,354;CL:0002320,7.21e-12,361;CL:0000945,3.99e-11,24;CL:0000826,3.99e-11,24;CL:0000219,8.38e-10,386;CL:0000094,6.46e-08,8;CL:0000048,1.09e-07,427;CL:0002393,1.17e-07,9;CL:0002397,1.17e-07,9;CL:0000034,2.29e-07,441;CL:0000723,3.21e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-18;42!CL:0000051;1.29e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.03e-17!102;UBERON:0003061!2.03e-17!102;UBERON:0002193!8.35e-17!112;UBERON:0001474!4.56e-16!86;UBERON:0002371!2.00e-15!80;UBERON:0002405!1.60e-13!115;UBERON:0003081!2.24e-11!216;UBERON:0004765!1.93e-10!101;UBERON:0001434!1.93e-10!101;UBERON:0002384!4.89e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.70e-23,98;UBERON:0003061,1.70e-23,98;UBERON:0002193,6.78e-22,108;UBERON:0001474,1.60e-21,82;UBERON:0002371,3.26e-21,76;UBERON:0002405,9.32e-21,93;UBERON:0004765,3.56e-17,90;UBERON:0003081,1.14e-13,203;UBERON:0001434,1.84e-13,100;UBERON:0002384,2.92e-11,371 | |||
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| ||
|short_description=p2@NXT1 | |||
}} | }} |
Latest revision as of 20:02, 24 September 2015
Short description: | p2@NXT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NXT1_5end |
Coexpression cluster: | C3640_Eosinophils_Basophils_CD8_Dendritic_Natural_CD34_immature |
Association with transcript: | 127bp_to_ENST00000254998, NM_013248, uc002wsx.1_5end |
EntrezGene: | NXT1 |
HGNC: | 15913 |
UniProt: | Q9UKK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.70e-23 | 98 |
blood island | 1.70e-23 | 98 |
hemolymphoid system | 6.78e-22 | 108 |
bone element | 1.60e-21 | 82 |
bone marrow | 3.26e-21 | 76 |
immune system | 9.32e-21 | 93 |
skeletal element | 3.56e-17 | 90 |
lateral plate mesoderm | 1.14e-13 | 203 |
skeletal system | 1.84e-13 | 100 |
connective tissue | 2.92e-11 | 371 |