FFCP PHASE1:Hg19::chr9:5510613..5510622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80380 | |EntrezGene=80380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18731 | |HGNC=18731 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ51 | |UniProt=Q9BQ51 | ||
|association_with_transcript=43bp_to_ENST00000397747_5end | |association_with_transcript=43bp_to_ENST00000397747_5end | ||
|cluster_id=chr9:5510613..5510622,+ | |||
|coexpression_cluster_id=C2021 | |coexpression_cluster_id=C2021 | ||
|description=CAGE_peak_4_at_PDCD1LG2_5end | |description=CAGE_peak_4_at_PDCD1LG2_5end | ||
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|ontology_enrichment_celltype=CL:0000359!6.10e-17!32;CL:0000055!3.22e-16!180;CL:0000144!3.99e-16!625;CL:0000192!9.15e-15!42;CL:0000514!9.15e-15!42;CL:0002371!1.93e-14!591;CL:0000548!2.14e-14!679;CL:0000004!2.14e-14!679;CL:0000255!2.14e-14!679;CL:0000012!6.36e-14!682;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000222!3.99e-11!119;CL:0000723!7.80e-11!436;CL:0000187!1.60e-10!54;CL:0000048!1.77e-10!430;CL:0002620!2.63e-10!23;CL:0000003!3.15e-10!722;CL:0000034!1.04e-09!444;CL:0000393!1.54e-09!60;CL:0000211!1.54e-09!60;CL:0000183!1.55e-09!59;CL:0000057!1.09e-08!75;CL:0002539!2.24e-08!10;CL:0000220!1.79e-07!246;CL:0002321!3.44e-07!248 | |ontology_enrichment_celltype=CL:0000359!6.10e-17!32;CL:0000055!3.22e-16!180;CL:0000144!3.99e-16!625;CL:0000192!9.15e-15!42;CL:0000514!9.15e-15!42;CL:0002371!1.93e-14!591;CL:0000548!2.14e-14!679;CL:0000004!2.14e-14!679;CL:0000255!2.14e-14!679;CL:0000012!6.36e-14!682;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000222!3.99e-11!119;CL:0000723!7.80e-11!436;CL:0000187!1.60e-10!54;CL:0000048!1.77e-10!430;CL:0002620!2.63e-10!23;CL:0000003!3.15e-10!722;CL:0000034!1.04e-09!444;CL:0000393!1.54e-09!60;CL:0000211!1.54e-09!60;CL:0000183!1.55e-09!59;CL:0000057!1.09e-08!75;CL:0002539!2.24e-08!10;CL:0000220!1.79e-07!246;CL:0002321!3.44e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.76e-19;32!CL:0002539;5.05e-10;10!CL:0000192;7.35e-10;43!CL:0002166;2.45e-07;3!CL:0002595;2.58e-07;5!CL:0002541;6.80e-07;3 | |ontology_enrichment_celltype_v019=CL:0000359;4.76e-19;32!CL:0002539;5.05e-10;10!CL:0000192;7.35e-10;43!CL:0002166;2.45e-07;3!CL:0002595;2.58e-07;5!CL:0002541;6.80e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.07e-21,32;CL:0000192,2.13e-14,43;CL:0000514,2.13e-14,43;CL:0000680,2.68e-10,58;CL:0000056,2.68e-10,58;CL:0000355,2.68e-10,58;CL:0002539,3.62e-10,10;CL:0000187,4.97e-10,55;CL:0000393,1.67e-09,61;CL:0000211,1.67e-09,61;CL:0002595,1.76e-07,5;CL:0002166,2.28e-07,3;CL:0000723,2.73e-07,433;CL:0000048,3.39e-07,427;CL:0002541,3.67e-07,3;CL:0000034,7.53e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;7.35e-10;43 | |ontology_enrichment_development_v019=CL:0000514;7.35e-10;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.96e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;2.96e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.03e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.33e-16!42;UBERON:0003509!4.33e-16!42;UBERON:0004572!4.33e-16!42;UBERON:0004872!4.96e-13!84;UBERON:0000914!5.84e-13!83;UBERON:0002329!5.84e-13!83;UBERON:0003077!5.84e-13!83;UBERON:0003059!5.84e-13!83;UBERON:0007282!5.84e-13!83;UBERON:0009618!5.84e-13!83;UBERON:0007285!5.84e-13!83;UBERON:0004573!9.24e-13!33;UBERON:0004571!9.24e-13!33;UBERON:0000486!1.33e-11!82;UBERON:0001981!1.99e-11!60;UBERON:0007500!1.99e-11!60;UBERON:0004537!1.99e-11!60;UBERON:0006965!1.99e-11!60;UBERON:0000055!1.52e-10!69;UBERON:0001134!6.02e-10!61;UBERON:0002036!6.02e-10!61;UBERON:0003082!6.02e-10!61;UBERON:0004290!6.20e-10!70;UBERON:0002204!3.18e-09!167;UBERON:0002385!3.49e-09!63;UBERON:0001015!3.49e-09!63;UBERON:0000383!3.49e-09!63;UBERON:0002049!4.11e-09!79;UBERON:0007798!4.11e-09!79;UBERON:0004237!2.24e-08!10;UBERON:0004695!2.24e-08!10;UBERON:0002111!2.24e-08!10;UBERON:0004178!2.24e-08!10;UBERON:0000947!5.16e-08!21;UBERON:0010191!5.16e-08!21;UBERON:0003081!1.60e-07!216;UBERON:0004535!1.61e-07!110;UBERON:0003102!3.04e-07!95;UBERON:0005256!4.70e-07!143;UBERON:0002199!5.37e-07!45;UBERON:0002416!5.37e-07!45;UBERON:0001009!7.11e-07!113;UBERON:0002097!8.73e-07!40 | |ontology_enrichment_uberon=UBERON:0001637!4.33e-16!42;UBERON:0003509!4.33e-16!42;UBERON:0004572!4.33e-16!42;UBERON:0004872!4.96e-13!84;UBERON:0000914!5.84e-13!83;UBERON:0002329!5.84e-13!83;UBERON:0003077!5.84e-13!83;UBERON:0003059!5.84e-13!83;UBERON:0007282!5.84e-13!83;UBERON:0009618!5.84e-13!83;UBERON:0007285!5.84e-13!83;UBERON:0004573!9.24e-13!33;UBERON:0004571!9.24e-13!33;UBERON:0000486!1.33e-11!82;UBERON:0001981!1.99e-11!60;UBERON:0007500!1.99e-11!60;UBERON:0004537!1.99e-11!60;UBERON:0006965!1.99e-11!60;UBERON:0000055!1.52e-10!69;UBERON:0001134!6.02e-10!61;UBERON:0002036!6.02e-10!61;UBERON:0003082!6.02e-10!61;UBERON:0004290!6.20e-10!70;UBERON:0002204!3.18e-09!167;UBERON:0002385!3.49e-09!63;UBERON:0001015!3.49e-09!63;UBERON:0000383!3.49e-09!63;UBERON:0002049!4.11e-09!79;UBERON:0007798!4.11e-09!79;UBERON:0004237!2.24e-08!10;UBERON:0004695!2.24e-08!10;UBERON:0002111!2.24e-08!10;UBERON:0004178!2.24e-08!10;UBERON:0000947!5.16e-08!21;UBERON:0010191!5.16e-08!21;UBERON:0003081!1.60e-07!216;UBERON:0004535!1.61e-07!110;UBERON:0003102!3.04e-07!95;UBERON:0005256!4.70e-07!143;UBERON:0002199!5.37e-07!45;UBERON:0002416!5.37e-07!45;UBERON:0001009!7.11e-07!113;UBERON:0002097!8.73e-07!40 | ||
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| ||
|short_description=p4@PDCD1LG2 | |short_description=p4@PDCD1LG2 | ||
}} | }} |
Latest revision as of 13:52, 17 September 2015
Short description: | p4@PDCD1LG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDCD1LG2_5end |
Coexpression cluster: | C2021_basal_mesenchymal_Dendritic_Smooth_Fibroblast_Aortic_Mallassezderived |
Association with transcript: | 43bp_to_ENST00000397747_5end |
EntrezGene: | PDCD1LG2 |
HGNC: | 18731 |
UniProt: | Q9BQ51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.07e-21 | 32 |
smooth muscle cell | 2.13e-14 | 43 |
smooth muscle myoblast | 2.13e-14 | 43 |
muscle precursor cell | 2.68e-10 | 58 |
myoblast | 2.68e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.68e-10 | 58 |
aortic smooth muscle cell | 3.62e-10 | 10 |
muscle cell | 4.97e-10 | 55 |
electrically responsive cell | 1.67e-09 | 61 |
electrically active cell | 1.67e-09 | 61 |
smooth muscle cell of the subclavian artery | 1.76e-07 | 5 |
epithelial cell of Malassez | 2.28e-07 | 3 |
somatic stem cell | 2.73e-07 | 433 |
multi fate stem cell | 3.39e-07 | 427 |
chorionic membrane mesenchymal stem cell | 3.67e-07 | 3 |
stem cell | 7.53e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.03e-08 | 14 |