FFCP PHASE1:Hg19::chr18:61558795..61558815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5055 | |EntrezGene=5055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8584 | |HGNC=8584 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_AB527561,DQ892867,DQ896116_5end | |association_with_transcript=116bp_to_AB527561,DQ892867,DQ896116_5end | ||
|cluster_id=chr18:61558795..61558815,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_6_at_SERPINB2_5end | |description=CAGE_peak_6_at_SERPINB2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.01e-40!42;CL:0000860!2.02e-37!45;CL:0002009!1.12e-26!65;CL:0002194!1.02e-25!63;CL:0000576!1.02e-25!63;CL:0000040!1.02e-25!63;CL:0000559!1.02e-25!63;CL:0000557!1.06e-23!71;CL:0000766!3.53e-23!76;CL:0000839!2.53e-22!70;CL:0000763!2.47e-16!112;CL:0000049!2.47e-16!112;CL:0002031!6.85e-12!124;CL:0002087!1.02e-11!119;CL:0000738!2.82e-11!140;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000037!6.07e-09!172;CL:0000566!6.07e-09!172;CL:0000988!5.64e-08!182 | |ontology_enrichment_celltype=CL:0002057!1.01e-40!42;CL:0000860!2.02e-37!45;CL:0002009!1.12e-26!65;CL:0002194!1.02e-25!63;CL:0000576!1.02e-25!63;CL:0000040!1.02e-25!63;CL:0000559!1.02e-25!63;CL:0000557!1.06e-23!71;CL:0000766!3.53e-23!76;CL:0000839!2.53e-22!70;CL:0000763!2.47e-16!112;CL:0000049!2.47e-16!112;CL:0002031!6.85e-12!124;CL:0002087!1.02e-11!119;CL:0000738!2.82e-11!140;CL:0002032!1.06e-09!165;CL:0000837!1.06e-09!165;CL:0000037!6.07e-09!172;CL:0000566!6.07e-09!172;CL:0000988!5.64e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.40e-90;33!CL:0002057;8.40e-90;33!CL:0000473;3.85e-63;39!CL:0000234;3.85e-63;39!CL:0000576;5.90e-41;48!CL:0000766;5.52e-22;69!CL:0000763;1.01e-15;100!CL:0002087;2.09e-14;104!CL:0000738;7.79e-07;136!CL:0000219;8.46e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;8.40e-90;33!CL:0002057;8.40e-90;33!CL:0000473;3.85e-63;39!CL:0000234;3.85e-63;39!CL:0000576;5.90e-41;48!CL:0000766;5.52e-22;69!CL:0000763;1.01e-15;100!CL:0002087;2.09e-14;104!CL:0000738;7.79e-07;136!CL:0000219;8.46e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.78e-79,42;CL:0002057,1.78e-79,42;CL:0000473,3.50e-69,48;CL:0000234,3.50e-69,48;CL:0002194,9.18e-55,59;CL:0000576,9.18e-55,59;CL:0000040,9.18e-55,59;CL:0000559,9.18e-55,59;CL:0002009,6.67e-53,61;CL:0000839,9.83e-49,66;CL:0000557,5.66e-48,67;CL:0000766,1.75e-44,72;CL:0000763,8.69e-29,108;CL:0000049,8.69e-29,108;CL:0002087,7.29e-27,115;CL:0002031,1.26e-25,120;CL:0000738,2.89e-22,136;CL:0002032,2.44e-18,161;CL:0000837,2.44e-18,161;CL:0000037,1.90e-17,168;CL:0000988,2.11e-16,177;CL:0000134,1.66e-08,354;CL:0002320,2.84e-08,361;CL:0000219,1.90e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-57;42!CL:0000049;6.67e-10;108 | |ontology_enrichment_development_v019=CL:0002057;3.29e-57;42!CL:0000049;6.67e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;4.85e-10;1 | |ontology_enrichment_disease_v019=DOID:2513;4.85e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,4.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.41e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!2.91e-15!101;UBERON:0001434!2.91e-15!101;UBERON:0002390!5.77e-14!102;UBERON:0003061!5.77e-14!102;UBERON:0002193!6.15e-13!112;UBERON:0002405!2.19e-12!115;UBERON:0002204!4.22e-11!167;UBERON:0003081!2.28e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!4.41e-20!80;UBERON:0001474!2.04e-19!86;UBERON:0004765!2.91e-15!101;UBERON:0001434!2.91e-15!101;UBERON:0002390!5.77e-14!102;UBERON:0003061!5.77e-14!102;UBERON:0002193!6.15e-13!112;UBERON:0002405!2.19e-12!115;UBERON:0002204!4.22e-11!167;UBERON:0003081!2.28e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-42,76;UBERON:0001474,9.21e-39,82;UBERON:0004765,4.35e-35,90;UBERON:0002405,7.16e-34,93;UBERON:0002390,5.25e-32,98;UBERON:0003061,5.25e-32,98;UBERON:0001434,2.60e-31,100;UBERON:0002193,8.69e-29,108;UBERON:0002204,1.43e-17,167;UBERON:0003081,1.41e-15,203;UBERON:0000926,7.52e-09,315;UBERON:0004120,7.52e-09,315;UBERON:0006603,7.52e-09,315;UBERON:0002384,5.92e-08,371 | |||
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| ||
|short_description=p6@SERPINB2 | |short_description=p6@SERPINB2 | ||
}} | }} |
Latest revision as of 04:42, 20 September 2015
Short description: | p6@SERPINB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 116bp_to_AB527561, DQ892867, DQ896116_5end |
EntrezGene: | SERPINB2 |
HGNC: | 8584 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.78e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-79 | 42 |
defensive cell | 3.50e-69 | 48 |
phagocyte | 3.50e-69 | 48 |
monopoietic cell | 9.18e-55 | 59 |
monocyte | 9.18e-55 | 59 |
monoblast | 9.18e-55 | 59 |
promonocyte | 9.18e-55 | 59 |
macrophage dendritic cell progenitor | 6.67e-53 | 61 |
myeloid lineage restricted progenitor cell | 9.83e-49 | 66 |
granulocyte monocyte progenitor cell | 5.66e-48 | 67 |
myeloid leukocyte | 1.75e-44 | 72 |
myeloid cell | 8.69e-29 | 108 |
common myeloid progenitor | 8.69e-29 | 108 |
nongranular leukocyte | 7.29e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-25 | 120 |
leukocyte | 2.89e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.44e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.44e-18 | 161 |
hematopoietic stem cell | 1.90e-17 | 168 |
hematopoietic cell | 2.11e-16 | 177 |
mesenchymal cell | 1.66e-08 | 354 |
connective tissue cell | 2.84e-08 | 361 |
motile cell | 1.90e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.12e-42 | 76 |
bone element | 9.21e-39 | 82 |
skeletal element | 4.35e-35 | 90 |
immune system | 7.16e-34 | 93 |
hematopoietic system | 5.25e-32 | 98 |
blood island | 5.25e-32 | 98 |
skeletal system | 2.60e-31 | 100 |
hemolymphoid system | 8.69e-29 | 108 |
musculoskeletal system | 1.43e-17 | 167 |
lateral plate mesoderm | 1.41e-15 | 203 |
mesoderm | 7.52e-09 | 315 |
mesoderm-derived structure | 7.52e-09 | 315 |
presumptive mesoderm | 7.52e-09 | 315 |
connective tissue | 5.92e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.44e-10 | 1 |