FFCP PHASE1:Hg19::chr1:153518270..153518290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6275 | |EntrezGene=6275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10494 | |HGNC=10494 | ||
|TSSclassifier=strong | |||
|UniProt=P26447,F5H3J5 | |UniProt=P26447,F5H3J5 | ||
|association_with_transcript=0bp_to_ENST00000354332,ENST00000468373,ENST00000545360,NM_002961,NM_019554,uc001fby.2,uc001fbz.2_5end | |association_with_transcript=0bp_to_ENST00000354332,ENST00000468373,ENST00000545360,NM_002961,NM_019554,uc001fby.2,uc001fbz.2_5end | ||
|cluster_id=chr1:153518270..153518290,- | |||
|description=CAGE_peak_1_at_S100A4_5end | |description=CAGE_peak_1_at_S100A4_5end | ||
|id=chr1:153518270..153518290,- | |id=chr1:153518270..153518290,- | ||
|ontology_enrichment_celltype=CL:0002320!1.25e-38!365;CL:0000134!2.21e-37!358;CL:0000738!3.48e-32!140;CL:0000037!8.95e-32!172;CL:0000566!8.95e-32!172;CL:0000766!1.45e-31!76;CL:0002032!9.40e-31!165;CL:0000837!9.40e-31!165;CL:0000988!5.30e-30!182;CL:0000048!1.42e-29!430;CL:0000763!5.78e-29!112;CL:0000049!5.78e-29!112;CL:0000557!7.30e-29!71;CL:0002031!7.61e-28!124;CL:0000723!8.26e-28!436;CL:0000839!1.24e-27!70;CL:0002009!1.47e-27!65;CL:0000034!1.90e-27!444;CL:0002087!1.91e-26!119;CL:0002194!2.13e-26!63;CL:0000576!2.13e-26!63;CL:0000040!2.13e-26!63;CL:0000559!2.13e-26!63;CL:0000219!3.29e-26!390;CL:0000860!8.00e-25!45;CL:0002057!7.77e-24!42;CL:0002371!1.58e-07!591;CL:0000791!7.47e-07!18;CL:0000789!7.47e-07!18;CL:0002420!7.47e-07!18;CL:0002419!7.47e-07!18;CL:0000790!7.47e-07!18;CL:0002393!7.73e-07!9;CL:0002397!7.73e-07!9 | |ontology_enrichment_celltype=CL:0002320!1.25e-38!365;CL:0000134!2.21e-37!358;CL:0000738!3.48e-32!140;CL:0000037!8.95e-32!172;CL:0000566!8.95e-32!172;CL:0000766!1.45e-31!76;CL:0002032!9.40e-31!165;CL:0000837!9.40e-31!165;CL:0000988!5.30e-30!182;CL:0000048!1.42e-29!430;CL:0000763!5.78e-29!112;CL:0000049!5.78e-29!112;CL:0000557!7.30e-29!71;CL:0002031!7.61e-28!124;CL:0000723!8.26e-28!436;CL:0000839!1.24e-27!70;CL:0002009!1.47e-27!65;CL:0000034!1.90e-27!444;CL:0002087!1.91e-26!119;CL:0002194!2.13e-26!63;CL:0000576!2.13e-26!63;CL:0000040!2.13e-26!63;CL:0000559!2.13e-26!63;CL:0000219!3.29e-26!390;CL:0000860!8.00e-25!45;CL:0002057!7.77e-24!42;CL:0002371!1.58e-07!591;CL:0000791!7.47e-07!18;CL:0000789!7.47e-07!18;CL:0002420!7.47e-07!18;CL:0002419!7.47e-07!18;CL:0000790!7.47e-07!18;CL:0002393!7.73e-07!9;CL:0002397!7.73e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-17;33!CL:0002057;8.22e-17;33!CL:0000473;2.40e-16;39!CL:0000234;2.40e-16;39!CL:0000576;7.20e-16;48!CL:0000766;4.17e-14;69!CL:0000763;1.97e-09;100!CL:0002087;5.47e-08;104!CL:0000738;1.65e-07;136!CL:0000791;7.24e-07;18!CL:0000789;7.24e-07;18!CL:0002419;7.24e-07;18 | |ontology_enrichment_celltype_v019=CL:0000860;8.22e-17;33!CL:0002057;8.22e-17;33!CL:0000473;2.40e-16;39!CL:0000234;2.40e-16;39!CL:0000576;7.20e-16;48!CL:0000766;4.17e-14;69!CL:0000763;1.97e-09;100!CL:0002087;5.47e-08;104!CL:0000738;1.65e-07;136!CL:0000791;7.24e-07;18!CL:0000789;7.24e-07;18!CL:0002419;7.24e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.03e-37,361;CL:0000134,1.73e-36,354;CL:0000738,1.05e-31,136;CL:0000766,1.68e-31,72;CL:0000037,3.73e-31,168;CL:0002032,3.82e-30,161;CL:0000837,3.82e-30,161;CL:0000988,6.65e-30,177;CL:0000557,8.63e-29,67;CL:0000763,1.59e-28,108;CL:0000049,1.59e-28,108;CL:0000048,1.89e-28,427;CL:0000839,1.53e-27,66;CL:0002009,1.57e-27,61;CL:0002031,2.20e-27,120;CL:0000723,1.05e-26,433;CL:0000473,1.85e-26,48;CL:0000234,1.85e-26,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0000034,2.41e-26,441;CL:0002087,5.46e-26,115;CL:0000219,1.44e-25,386;CL:0000860,6.93e-24,42;CL:0002057,6.93e-24,42;CL:0000791,7.27e-07,18;CL:0000789,7.27e-07,18;CL:0002420,7.27e-07,18;CL:0002419,7.27e-07,18;CL:0000790,7.27e-07,18;CL:0002393,7.52e-07,9;CL:0002397,7.52e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-17;42!CL:0000049;2.00e-08;108!CL:0000790;7.24e-07;18 | |ontology_enrichment_development_v019=CL:0002057;2.40e-17;42!CL:0000049;2.00e-08;108!CL:0000790;7.24e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.73e-36!375;UBERON:0002390!3.51e-30!102;UBERON:0003061!3.51e-30!102;UBERON:0002371!1.60e-26!80;UBERON:0002193!4.21e-25!112;UBERON:0004765!1.04e-24!101;UBERON:0001434!1.04e-24!101;UBERON:0001474!1.28e-24!86;UBERON:0002204!4.78e-18!167;UBERON:0002405!1.23e-13!115;UBERON:0003081!2.46e-10!216 | |ontology_enrichment_uberon=UBERON:0002384!2.73e-36!375;UBERON:0002390!3.51e-30!102;UBERON:0003061!3.51e-30!102;UBERON:0002371!1.60e-26!80;UBERON:0002193!4.21e-25!112;UBERON:0004765!1.04e-24!101;UBERON:0001434!1.04e-24!101;UBERON:0001474!1.28e-24!86;UBERON:0002204!4.78e-18!167;UBERON:0002405!1.23e-13!115;UBERON:0003081!2.46e-10!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@S100A4 | |short_description=p1@S100A4 | ||
}} | }} |
Latest revision as of 05:46, 17 September 2015
Short description: | p1@S100A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S100A4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354332, ENST00000468373, ENST00000545360, NM_002961, NM_019554, uc001fby.2, uc001fbz.2_5end |
EntrezGene: | S100A4 |
HGNC: | 10494 |
UniProt: | P26447F5H3J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.92e-35 | 371 |
hematopoietic system | 5.95e-30 | 98 |
blood island | 5.95e-30 | 98 |
bone marrow | 2.21e-26 | 76 |
hemolymphoid system | 1.20e-24 | 108 |
bone element | 1.83e-24 | 82 |
skeletal system | 3.36e-24 | 100 |
skeletal element | 5.05e-23 | 90 |
immune system | 3.13e-20 | 93 |
musculoskeletal system | 1.85e-17 | 167 |
lateral plate mesoderm | 1.36e-11 | 203 |
mesoderm | 9.43e-09 | 315 |
mesoderm-derived structure | 9.43e-09 | 315 |
presumptive mesoderm | 9.43e-09 | 315 |