FFCP PHASE1:Hg19::chr10:69847634..69847676,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:69847634..69847676,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr10:69847634..69847676,+ | |description=CAGE_peak_at_chr10:69847634..69847676,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!2.28e-08!254 | |ontology_enrichment_celltype=CL:0000066!2.28e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.89e-08;2 | |ontology_enrichment_celltype_v019=CL:1000415;2.89e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.31e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.93e-10;4!UBERON:0007284;4.93e-10;4!UBERON:0008814;8.66e-09;2!UBERON:0010056;8.66e-09;2!UBERON:0006603;1.83e-08;65 | |ontology_enrichment_development_v019=UBERON:0005062;4.93e-10;4!UBERON:0007284;4.93e-10;4!UBERON:0008814;8.66e-09;2!UBERON:0010056;8.66e-09;2!UBERON:0006603;1.83e-08;65 | ||
|ontology_enrichment_disease=DOID:305!1.72e-16!106;DOID:0050687!3.95e-15!143;DOID:162!1.38e-08!235;DOID:14566!4.39e-08!239 | |ontology_enrichment_disease=DOID:305!1.72e-16!106;DOID:0050687!3.95e-15!143;DOID:162!1.38e-08!235;DOID:14566!4.39e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:114;2.07e-09;2!DOID:4362;2.02e-07;5 | |ontology_enrichment_disease_v019=DOID:114;2.07e-09;2!DOID:4362;2.02e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.11e-09,2;DOID:4362,1.85e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001557!1.80e-10!19;UBERON:0003104!3.31e-10!238;UBERON:0009142!3.31e-10!238;UBERON:0001737!2.09e-09!9;UBERON:0000072!6.11e-09!46;UBERON:0000065!9.18e-08!53;UBERON:0001004!1.49e-07!72;UBERON:0001007!2.01e-07!155;UBERON:0001555!2.01e-07!155;UBERON:0007026!2.01e-07!155;UBERON:0004119!9.23e-07!169;UBERON:0000925!9.23e-07!169;UBERON:0006595!9.23e-07!169 | |ontology_enrichment_uberon=UBERON:0001557!1.80e-10!19;UBERON:0003104!3.31e-10!238;UBERON:0009142!3.31e-10!238;UBERON:0001737!2.09e-09!9;UBERON:0000072!6.11e-09!46;UBERON:0000065!9.18e-08!53;UBERON:0001004!1.49e-07!72;UBERON:0001007!2.01e-07!155;UBERON:0001555!2.01e-07!155;UBERON:0007026!2.01e-07!155;UBERON:0004119!9.23e-07!169;UBERON:0000925!9.23e-07!169;UBERON:0006595!9.23e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.04e-13;3!UBERON:0000946;3.04e-13;3!UBERON:0004151;4.92e-13;3!UBERON:0001723;1.55e-12;3!UBERON:0001033;1.55e-12;3!UBERON:0007100;7.46e-12;25!UBERON:0005090;2.07e-09;2!UBERON:0001630;2.07e-09;2!UBERON:0002081;2.48e-09;2!UBERON:0002133;2.48e-09;2!UBERON:0002294;1.59e-08;7!UBERON:0001173;1.59e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0003978;3.04e-13;3!UBERON:0000946;3.04e-13;3!UBERON:0004151;4.92e-13;3!UBERON:0001723;1.55e-12;3!UBERON:0001033;1.55e-12;3!UBERON:0007100;7.46e-12;25!UBERON:0005090;2.07e-09;2!UBERON:0001630;2.07e-09;2!UBERON:0002081;2.48e-09;2!UBERON:0002133;2.48e-09;2!UBERON:0002294;1.59e-08;7!UBERON:0001173;1.59e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.93e-13,3;UBERON:0009751,2.93e-13,3;UBERON:0000946,2.93e-13,3;UBERON:0002523,2.93e-13,3;UBERON:0005983,2.93e-13,3;UBERON:0002165,2.93e-13,3;UBERON:0002062,2.93e-13,3;UBERON:0007280,2.93e-13,3;UBERON:0004151,4.94e-13,3;UBERON:0001723,1.88e-12,3;UBERON:0001033,1.88e-12,3;UBERON:0010056,1.88e-12,3;UBERON:0007100,7.59e-11,27;UBERON:0005090,2.03e-09,2;UBERON:0001630,2.03e-09,2;UBERON:0002133,2.39e-09,2;UBERON:0002081,2.49e-09,2;UBERON:0010227,2.49e-09,2;UBERON:0001557,8.63e-09,19;UBERON:0003103,3.19e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,1.25572744982203,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,1.51726221070292,0.723033089650446,0.882351781859152,0.217879444092406,0.237270619111097,1.48314438976181,1.37355025587742,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,1.73472656537328,1.52283839490527,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0.902399225814824,0.693138033939733,0,0,0,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,0.267096106940212,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,2.60979897622522,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,1.16828856491525,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,1.52513848926586,2.78847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,7.2231988256891,0,0,1.9566461893209,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0.195984794828755,2.00236175134926,0.52418000472609,1.54787429224455,2.03188295707079,3.50828722013691,1.64230914106418,0.678923115418936,0,2.93774963014692,0.274083849293502,0.19871461170299,0,1.95551382734803,1.12222348352147,0,0,0,0,0,0.288109595976299,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,10.0541664458012,19.4786360409931,8.61447629492177,8.58619702145662,24.4658847437845,9.37320121255865,15.8552995068674,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0.717149357331379,0.191915197319445,10.0057345692271,5.29673576292345,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.342173675768659,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0.453411851024545,0.694567422971502,0,4.2981321859557,0,0,0.530067437837643,0.192914038270915,0,0,0,1.82315973706429,0,0,0,0,0,0.245772908753719,4.43755459053117,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,6.94695649745012,0.351742488719241,0.766574565837572,0,0,0,0,0,0,0,0,0.0657727735628491,0.827356886187777,0.333694205676207,0.156986185701028,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,3.2074961596167,0,0,0,0,0,46.6148762775284,35.1106799448365,3.4794432940146,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.07132363163395,0.705789743431384,0.240724100067505,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9411029864549,0.714193294391221,0,0,0,0.25458863311266,0.808468755832877,9.14410341167238,7.1868993227909,1.0776328482334,0.143444410785353,2.32862249582209,0.162806537221949,0.213454691755431,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.869079113764942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.113432183160021,1.25572744982203,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,1.51726221070292,0.723033089650446,0.882351781859152,0.217879444092406,0.237270619111097,1.48314438976181,1.37355025587742,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,1.73472656537328,1.52283839490527,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0.902399225814824,0.693138033939733,0,0,0,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,0.267096106940212,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,2.60979897622522,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,1.16828856491525,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,1.52513848926586,2.78847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,7.2231988256891,0,0,1.9566461893209,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0.195984794828755,2.00236175134926,0.52418000472609,1.54787429224455,2.03188295707079,3.50828722013691,1.64230914106418,0.678923115418936,0,2.93774963014692,0.274083849293502,0.19871461170299,0,1.95551382734803,1.12222348352147,0,0,0,0,0,0.288109595976299,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,10.0541664458012,19.4786360409931,8.61447629492177,8.58619702145662,24.4658847437845,9.37320121255865,15.8552995068674,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0.717149357331379,0.191915197319445,10.0057345692271,5.29673576292345,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.342173675768659,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0.453411851024545,0.694567422971502,0,4.2981321859557,0,0,0.530067437837643,0.192914038270915,0,0,0,1.82315973706429,0,0,0,0,0,0.245772908753719,4.43755459053117,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,6.94695649745012,0.351742488719241,0.766574565837572,0,0,0,0,0,0,0,0,0.0657727735628491,0.827356886187777,0.333694205676207,0.156986185701028,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0,0,0,3.2074961596167,0,0,0,0,0,46.6148762775284,35.1106799448365,3.4794432940146,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,1.07132363163395,0.705789743431384,0.240724100067505,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9411029864549,0.714193294391221,0,0,0,0.25458863311266,0.808468755832877,9.14410341167238,7.1868993227909,1.0776328482334,0.143444410785353,2.32862249582209,0.162806537221949,0.213454691755431,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p@chr10:69847634..69847676,+ | |short_description=p@chr10:69847634..69847676,+ | ||
}} | }} |
Latest revision as of 14:55, 23 July 2015
Short description: | p@chr10:69847634..69847676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:69847634..69847676, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
valve | 2.93e-13 | 3 |
cardiac mesenchyme | 2.93e-13 | 3 |
cardial valve | 2.93e-13 | 3 |
tunica intima | 2.93e-13 | 3 |
heart layer | 2.93e-13 | 3 |
endocardium | 2.93e-13 | 3 |
endocardial cushion | 2.93e-13 | 3 |
presumptive endocardium | 2.93e-13 | 3 |
cardiac chamber | 4.94e-13 | 3 |
tongue | 1.88e-12 | 3 |
gustatory system | 1.88e-12 | 3 |
future tongue | 1.88e-12 | 3 |
primary circulatory organ | 7.59e-11 | 27 |
muscle structure | 2.03e-09 | 2 |
muscle organ | 2.03e-09 | 2 |
atrioventricular valve | 2.39e-09 | 2 |
cardiac atrium | 2.49e-09 | 2 |
future cardiac atrium | 2.49e-09 | 2 |
upper respiratory tract | 8.63e-09 | 19 |
compound organ | 3.19e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.11e-09 | 2 |
cervical cancer | 1.85e-07 | 5 |