FFCP PHASE1:Hg19::chr12:95510743..95510753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55785 | |EntrezGene=55785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21740 | |HGNC=21740 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQX5 | |UniProt=F8VQX5 | ||
|association_with_transcript=0bp_to_ENST00000551521_5end | |association_with_transcript=0bp_to_ENST00000551521_5end | ||
|cluster_id=chr12:95510743..95510753,- | |||
|coexpression_cluster_id=C1694 | |coexpression_cluster_id=C1694 | ||
|description=CAGE_peak_8_at_FGD6_5end | |description=CAGE_peak_8_at_FGD6_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.21e-25!254;CL:0002076!1.59e-15!43;CL:0002159!4.89e-15!13;CL:0002621!1.48e-13!3;CL:0000362!4.96e-13!8;CL:0000240!2.74e-11!6;CL:0000311!2.74e-11!6;CL:0000079!2.74e-11!6;CL:0000237!2.74e-11!6;CL:0000036!2.74e-11!6;CL:0000357!2.74e-11!6;CL:0000114!2.74e-11!6;CL:0002368!6.11e-11!13;CL:0000223!1.88e-10!59;CL:0000244!4.12e-10!4;CL:0000731!4.12e-10!4;CL:0000317!1.54e-09!2;CL:1000448!1.54e-09!2;CL:0002308!1.54e-09!2;CL:0002140!1.54e-09!2;CL:0002077!1.28e-08!33;CL:0000312!4.19e-08!5;CL:0000076!7.53e-07!62;CL:0000063!7.76e-07!578;CL:0000068!9.35e-07!3;CL:0000069!9.35e-07!3;CL:0000307!9.35e-07!3;CL:0000377!9.35e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.21e-25!254;CL:0002076!1.59e-15!43;CL:0002159!4.89e-15!13;CL:0002621!1.48e-13!3;CL:0000362!4.96e-13!8;CL:0000240!2.74e-11!6;CL:0000311!2.74e-11!6;CL:0000079!2.74e-11!6;CL:0000237!2.74e-11!6;CL:0000036!2.74e-11!6;CL:0000357!2.74e-11!6;CL:0000114!2.74e-11!6;CL:0002368!6.11e-11!13;CL:0000223!1.88e-10!59;CL:0000244!4.12e-10!4;CL:0000731!4.12e-10!4;CL:0000317!1.54e-09!2;CL:1000448!1.54e-09!2;CL:0002308!1.54e-09!2;CL:0002140!1.54e-09!2;CL:0002077!1.28e-08!33;CL:0000312!4.19e-08!5;CL:0000076!7.53e-07!62;CL:0000063!7.76e-07!578;CL:0000068!9.35e-07!3;CL:0000069!9.35e-07!3;CL:0000307!9.35e-07!3;CL:0000377!9.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;5.70e-34;3!CL:0002159;6.71e-28;14!CL:0000317;5.47e-23;2!CL:1000448;5.47e-23;2!CL:0002308;5.47e-23;2!CL:0002140;5.47e-23;2!CL:0000362;7.76e-20;9!CL:0000307;4.63e-16;3!CL:0002166;1.14e-15;3!CL:0002368;6.73e-14;13!CL:0002076;1.41e-13;42!CL:0002077;2.01e-13;34!CL:0000312;8.88e-10;5!CL:0000622;8.88e-10;5!CL:0000240;2.71e-08;6!CL:0000311;2.71e-08;6!CL:0000079;2.71e-08;6!CL:0000237;2.71e-08;6!CL:0000154;2.71e-08;6 | |ontology_enrichment_celltype_v019=CL:0002621;5.70e-34;3!CL:0002159;6.71e-28;14!CL:0000317;5.47e-23;2!CL:1000448;5.47e-23;2!CL:0002308;5.47e-23;2!CL:0002140;5.47e-23;2!CL:0000362;7.76e-20;9!CL:0000307;4.63e-16;3!CL:0002166;1.14e-15;3!CL:0002368;6.73e-14;13!CL:0002076;1.41e-13;42!CL:0002077;2.01e-13;34!CL:0000312;8.88e-10;5!CL:0000622;8.88e-10;5!CL:0000240;2.71e-08;6!CL:0000311;2.71e-08;6!CL:0000079;2.71e-08;6!CL:0000237;2.71e-08;6!CL:0000154;2.71e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,9.46e-34,3;CL:0002159,8.91e-28,14;CL:0000317,6.12e-23,2;CL:1000448,6.12e-23,2;CL:0002308,6.12e-23,2;CL:0002140,6.12e-23,2;CL:0000362,9.44e-20,9;CL:0002076,4.55e-16,42;CL:0000068,4.99e-16,3;CL:0000069,4.99e-16,3;CL:0000307,4.99e-16,3;CL:0000377,4.99e-16,3;CL:0002166,1.32e-15,3;CL:0002077,3.67e-15,34;CL:0002368,6.30e-14,13;CL:0000066,5.57e-12,253;CL:0000223,2.14e-11,58;CL:0000622,9.28e-10,5;CL:0000312,1.01e-09,5;CL:0000154,2.81e-08,6;CL:0000240,3.02e-08,6;CL:0000311,3.02e-08,6;CL:0000079,3.02e-08,6;CL:0000237,3.02e-08,6;CL:0000036,3.02e-08,6;CL:0000357,3.02e-08,6;CL:0000114,3.02e-08,6;CL:0002321,9.28e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.63e-16;3!CL:0000357;2.71e-08;6!CL:0000114;2.71e-08;6!CL:0000223;2.25e-07;58 | |ontology_enrichment_development_v019=CL:0000377;4.63e-16;3!CL:0000357;2.71e-08;6!CL:0000114;2.71e-08;6!CL:0000223;2.25e-07;58 | ||
|ontology_enrichment_disease=DOID:4468!5.47e-09!2;DOID:305!1.21e-08!106;DOID:3493!2.64e-08!2 | |ontology_enrichment_disease=DOID:4468!5.47e-09!2;DOID:305!1.21e-08!106;DOID:3493!2.64e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;9.80e-07;2 | |ontology_enrichment_disease_v019=DOID:4468;9.80e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.48e-13!3;UBERON:0002419!1.54e-09!2;UBERON:0007771!1.54e-09!2;UBERON:0003297!1.54e-09!2;UBERON:0001821!1.54e-09!2;UBERON:0003487!1.54e-09!2;UBERON:0001820!1.54e-09!2;UBERON:0005089!1.54e-09!2;UBERON:0005088!1.54e-09!2;UBERON:0000365!3.63e-08!5;UBERON:0001003!2.70e-07!14;UBERON:0007376!2.70e-07!14;UBERON:0007383!2.70e-07!14;UBERON:0005910!7.27e-07!6 | |ontology_enrichment_uberon=UBERON:0001949!1.48e-13!3;UBERON:0002419!1.54e-09!2;UBERON:0007771!1.54e-09!2;UBERON:0003297!1.54e-09!2;UBERON:0001821!1.54e-09!2;UBERON:0003487!1.54e-09!2;UBERON:0001820!1.54e-09!2;UBERON:0005089!1.54e-09!2;UBERON:0005088!1.54e-09!2;UBERON:0000365!3.63e-08!5;UBERON:0001003!2.70e-07!14;UBERON:0007376!2.70e-07!14;UBERON:0007383!2.70e-07!14;UBERON:0005910!7.27e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.70e-34;3!UBERON:0002419;5.47e-23;2!UBERON:0007771;5.47e-23;2!UBERON:0003297;5.47e-23;2!UBERON:0001821;5.47e-23;2!UBERON:0003487;5.47e-23;2!UBERON:0001820;5.47e-23;2!UBERON:0010371;5.47e-17;31!UBERON:0000486;3.18e-15;12!UBERON:0003929;5.95e-15;7!UBERON:0003350;3.70e-13;8!UBERON:0001828;3.70e-13;8!UBERON:0001003;5.13e-12;15!UBERON:0007376;5.13e-12;15!UBERON:0001708;5.39e-12;4!UBERON:0008895;5.39e-12;4!UBERON:0011159;8.88e-10;5!UBERON:0003729;2.64e-08;13!UBERON:0003126;2.15e-07;7!UBERON:0001005;2.15e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001949;5.70e-34;3!UBERON:0002419;5.47e-23;2!UBERON:0007771;5.47e-23;2!UBERON:0003297;5.47e-23;2!UBERON:0001821;5.47e-23;2!UBERON:0003487;5.47e-23;2!UBERON:0001820;5.47e-23;2!UBERON:0010371;5.47e-17;31!UBERON:0000486;3.18e-15;12!UBERON:0003929;5.95e-15;7!UBERON:0003350;3.70e-13;8!UBERON:0001828;3.70e-13;8!UBERON:0001003;5.13e-12;15!UBERON:0007376;5.13e-12;15!UBERON:0001708;5.39e-12;4!UBERON:0008895;5.39e-12;4!UBERON:0011159;8.88e-10;5!UBERON:0003729;2.64e-08;13!UBERON:0003126;2.15e-07;7!UBERON:0001005;2.15e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.46e-34,3;UBERON:0002419,6.12e-23,2;UBERON:0007771,6.12e-23,2;UBERON:0003297,6.12e-23,2;UBERON:0001821,6.12e-23,2;UBERON:0003487,6.12e-23,2;UBERON:0001820,6.12e-23,2;UBERON:0005089,6.12e-23,2;UBERON:0005088,6.12e-23,2;UBERON:0003350,4.46e-13,8;UBERON:0001828,4.46e-13,8;UBERON:0001003,5.76e-12,15;UBERON:0007376,5.76e-12,15;UBERON:0007383,5.76e-12,15;UBERON:0001708,6.03e-12,4;UBERON:0008895,6.03e-12,4;UBERON:0003102,8.00e-10,99;UBERON:0011159,9.70e-10,5;UBERON:0010188,2.91e-08,6;UBERON:0002539,2.91e-08,6;UBERON:0008816,2.91e-08,6;UBERON:0003729,2.96e-08,13;UBERON:0003126,2.22e-07,7;UBERON:0001005,2.22e-07,7 | |||
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|short_description=p8@FGD6 | |short_description=p8@FGD6 | ||
}} | }} |
Latest revision as of 02:09, 16 September 2015
Short description: | p8@FGD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FGD6_5end |
Coexpression cluster: | C1694_squamous_Prostate_Sebocyte_Gingival_Mallassezderived_clear_Urothelial |
Association with transcript: | 0bp_to_ENST00000551521_5end |
EntrezGene: | FGD6 |
HGNC: | 21740 |
UniProt: | F8VQX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 9.46e-34 | 3 |
general ecto-epithelial cell | 8.91e-28 | 14 |
sebum secreting cell | 6.12e-23 | 2 |
epithelial cell of sweat gland | 6.12e-23 | 2 |
epithelial cell of skin gland | 6.12e-23 | 2 |
acinar cell of sebaceous gland | 6.12e-23 | 2 |
epidermal cell | 9.44e-20 | 9 |
endo-epithelial cell | 4.55e-16 | 42 |
duct epithelial cell | 4.99e-16 | 3 |
branched duct epithelial cell | 4.99e-16 | 3 |
tracheal epithelial cell | 4.99e-16 | 3 |
tracheoblast | 4.99e-16 | 3 |
epithelial cell of Malassez | 1.32e-15 | 3 |
ecto-epithelial cell | 3.67e-15 | 34 |
respiratory epithelial cell | 6.30e-14 | 13 |
epithelial cell | 5.57e-12 | 253 |
endodermal cell | 2.14e-11 | 58 |
acinar cell | 9.28e-10 | 5 |
keratinocyte | 1.01e-09 | 5 |
protein secreting cell | 2.81e-08 | 6 |
stratified squamous epithelial cell | 3.02e-08 | 6 |
keratin accumulating cell | 3.02e-08 | 6 |
stratified epithelial cell | 3.02e-08 | 6 |
keratinizing barrier epithelial cell | 3.02e-08 | 6 |
epithelial fate stem cell | 3.02e-08 | 6 |
stratified epithelial stem cell | 3.02e-08 | 6 |
surface ectodermal cell | 3.02e-08 | 6 |
embryonic cell | 9.28e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.46e-34 | 3 |
skin gland | 6.12e-23 | 2 |
epidermis gland | 6.12e-23 | 2 |
gland of integumental system | 6.12e-23 | 2 |
sebaceous gland | 6.12e-23 | 2 |
skin sebaceous gland | 6.12e-23 | 2 |
sweat gland | 6.12e-23 | 2 |
sweat gland placode | 6.12e-23 | 2 |
sebaceous gland placode | 6.12e-23 | 2 |
epithelium of mucosa | 4.46e-13 | 8 |
gingiva | 4.46e-13 | 8 |
skin epidermis | 5.76e-12 | 15 |
outer epithelium | 5.76e-12 | 15 |
enveloping layer of ectoderm | 5.76e-12 | 15 |
jaw skeleton | 6.03e-12 | 4 |
splanchnocranium | 6.03e-12 | 4 |
surface structure | 8.00e-10 | 99 |
primary subdivision of cranial skeletal system | 9.70e-10 | 5 |
protuberance | 2.91e-08 | 6 |
pharyngeal arch | 2.91e-08 | 6 |
embryonic head | 2.91e-08 | 6 |
mouth mucosa | 2.96e-08 | 13 |
trachea | 2.22e-07 | 7 |
respiratory airway | 2.22e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.52e-07 | 2 |