FFCP PHASE1:Hg19::chr7:107880511..107880522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000425651_5end | |association_with_transcript=-3bp_to_ENST00000425651_5end | ||
|cluster_id=chr7:107880511..107880522,- | |||
|description=CAGE_peak_17_at_NRCAM_5end | |description=CAGE_peak_17_at_NRCAM_5end | ||
|id=chr7:107880511..107880522,- | |id=chr7:107880511..107880522,- | ||
|ontology_enrichment_celltype=CL:0002605!1.76e-07!3 | |ontology_enrichment_celltype=CL:0002605!1.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;2.59e-12;3!CL:0002579;2.59e-12;3!CL:0002592;2.59e-12;3 | |ontology_enrichment_celltype_v019=CL:0002605;2.59e-12;3!CL:0002579;2.59e-12;3!CL:0002592;2.59e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.31e-12,3;CL:0002605,2.89e-12,3;CL:0002579,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0003498;2.59e-12;3!UBERON:0005985;2.59e-12;3!UBERON:0001621;2.59e-12;3!UBERON:0000956;3.25e-12;25!UBERON:0000203;3.25e-12;25!UBERON:0002791;3.73e-10;32!UBERON:0001869;3.73e-10;32!UBERON:0001893;4.28e-09;34!UBERON:0002021;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0003528;3.50e-07;34!UBERON:0002020;3.50e-07;34!UBERON:0000200;7.17e-07;6!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6!UBERON:0002619;9.39e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0003498;2.59e-12;3!UBERON:0005985;2.59e-12;3!UBERON:0001621;2.59e-12;3!UBERON:0000956;3.25e-12;25!UBERON:0000203;3.25e-12;25!UBERON:0002791;3.73e-10;32!UBERON:0001869;3.73e-10;32!UBERON:0001893;4.28e-09;34!UBERON:0002021;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0003528;3.50e-07;34!UBERON:0002020;3.50e-07;34!UBERON:0000200;7.17e-07;6!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6!UBERON:0002619;9.39e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0001621,2.31e-12,3;UBERON:0000956,3.13e-12,25;UBERON:0000203,3.13e-12,25;UBERON:0002791,8.51e-10,32;UBERON:0001869,8.51e-10,32;UBERON:0003528,2.81e-09,34;UBERON:0002020,2.81e-09,34;UBERON:0001893,2.81e-09,34;UBERON:0002021,5.73e-08,5;UBERON:0003498,6.13e-08,5;UBERON:0005985,6.13e-08,5;UBERON:0002780,7.58e-08,41;UBERON:0001890,7.58e-08,41;UBERON:0003080,7.58e-08,41;UBERON:0006240,7.58e-08,41;UBERON:0001950,2.44e-07,20;UBERON:0000200,7.17e-07,6;UBERON:0002619,8.87e-07,22;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
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|short_description=p17@NRCAM | |short_description=p17@NRCAM | ||
}} | }} |
Latest revision as of 02:32, 25 September 2015
Short description: | p17@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_NRCAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000425651_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.31e-12 | 3 |
astrocyte of the cerebral cortex | 2.89e-12 | 3 |
omentum preadipocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.48e-18 | 2 |
coronary artery | 2.31e-12 | 3 |
cerebral cortex | 3.13e-12 | 25 |
pallium | 3.13e-12 | 25 |
regional part of telencephalon | 8.51e-10 | 32 |
cerebral hemisphere | 8.51e-10 | 32 |
brain grey matter | 2.81e-09 | 34 |
gray matter | 2.81e-09 | 34 |
telencephalon | 2.81e-09 | 34 |
occipital lobe | 5.73e-08 | 5 |
heart blood vessel | 6.13e-08 | 5 |
coronary vessel | 6.13e-08 | 5 |
regional part of forebrain | 7.58e-08 | 41 |
forebrain | 7.58e-08 | 41 |
anterior neural tube | 7.58e-08 | 41 |
future forebrain | 7.58e-08 | 41 |
neocortex | 2.44e-07 | 20 |
gyrus | 7.17e-07 | 6 |
regional part of cerebral cortex | 8.87e-07 | 22 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |