FFCP PHASE1:Hg19::chr10:74927810..74927834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11319 | |EntrezGene=11319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17029 | |HGNC=17029 | ||
|TSSclassifier=strong | |||
|UniProt=O95905 | |UniProt=O95905 | ||
|association_with_transcript=0bp_to_ENST00000372979_5end | |association_with_transcript=0bp_to_ENST00000372979_5end | ||
|cluster_id=chr10:74927810..74927834,- | |||
|coexpression_cluster_id=C3044 | |coexpression_cluster_id=C3044 | ||
|description=CAGE_peak_2_at_ECD_5end | |description=CAGE_peak_2_at_ECD_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.38e-17!172;CL:0000566!1.38e-17!172;CL:0000738!4.30e-17!140;CL:0002032!5.61e-15!165;CL:0000837!5.61e-15!165;CL:0000988!8.58e-14!182;CL:0000838!1.29e-13!52;CL:0000542!2.35e-13!53;CL:0000051!2.35e-13!53;CL:0002031!4.66e-12!124;CL:0002087!2.05e-11!119;CL:0000791!2.96e-11!18;CL:0000789!2.96e-11!18;CL:0002420!2.96e-11!18;CL:0002419!2.96e-11!18;CL:0000790!2.96e-11!18;CL:0000084!7.10e-10!25;CL:0000827!7.10e-10!25;CL:0000625!9.32e-08!11 | |ontology_enrichment_celltype=CL:0000037!1.38e-17!172;CL:0000566!1.38e-17!172;CL:0000738!4.30e-17!140;CL:0002032!5.61e-15!165;CL:0000837!5.61e-15!165;CL:0000988!8.58e-14!182;CL:0000838!1.29e-13!52;CL:0000542!2.35e-13!53;CL:0000051!2.35e-13!53;CL:0002031!4.66e-12!124;CL:0002087!2.05e-11!119;CL:0000791!2.96e-11!18;CL:0000789!2.96e-11!18;CL:0002420!2.96e-11!18;CL:0002419!2.96e-11!18;CL:0000790!2.96e-11!18;CL:0000084!7.10e-10!25;CL:0000827!7.10e-10!25;CL:0000625!9.32e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.90e-11;18!CL:0000789;1.90e-11;18!CL:0002419;1.90e-11;18!CL:0000084;4.59e-10;25!CL:0000542;2.68e-08;53!CL:0000625;8.69e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;1.90e-11;18!CL:0000789;1.90e-11;18!CL:0002419;1.90e-11;18!CL:0000084;4.59e-10;25!CL:0000542;2.68e-08;53!CL:0000625;8.69e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.27e-18,168;CL:0000738,8.37e-18,136;CL:0002032,1.52e-15,161;CL:0000837,1.52e-15,161;CL:0000988,9.94e-15,177;CL:0000838,1.27e-13,52;CL:0000542,2.31e-13,53;CL:0000051,2.31e-13,53;CL:0002031,1.20e-12,120;CL:0002087,5.39e-12,115;CL:0000791,2.92e-11,18;CL:0000789,2.92e-11,18;CL:0002420,2.92e-11,18;CL:0002419,2.92e-11,18;CL:0000790,2.92e-11,18;CL:0000084,7.03e-10,25;CL:0000827,7.03e-10,25;CL:0000625,9.25e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.90e-11;18!CL:0000051;2.68e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.90e-11;18!CL:0000051;2.68e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-25!115;UBERON:0001049!7.60e-12!57;UBERON:0005068!7.60e-12!57;UBERON:0006241!7.60e-12!57;UBERON:0007135!7.60e-12!57;UBERON:0002780!3.71e-11!41;UBERON:0001890!3.71e-11!41;UBERON:0006240!3.71e-11!41;UBERON:0003080!2.21e-10!42;UBERON:0002616!5.40e-09!59;UBERON:0001893!1.25e-08!34;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0002791!2.24e-08!33;UBERON:0000955!7.30e-08!69;UBERON:0006238!7.30e-08!69;UBERON:0001869!9.64e-08!32;UBERON:0001017!5.79e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!2.69e-25!115;UBERON:0001049!7.60e-12!57;UBERON:0005068!7.60e-12!57;UBERON:0006241!7.60e-12!57;UBERON:0007135!7.60e-12!57;UBERON:0002780!3.71e-11!41;UBERON:0001890!3.71e-11!41;UBERON:0006240!3.71e-11!41;UBERON:0003080!2.21e-10!42;UBERON:0002616!5.40e-09!59;UBERON:0001893!1.25e-08!34;UBERON:0002020!1.37e-08!34;UBERON:0003528!1.37e-08!34;UBERON:0002791!2.24e-08!33;UBERON:0000955!7.30e-08!69;UBERON:0006238!7.30e-08!69;UBERON:0001869!9.64e-08!32;UBERON:0001017!5.79e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.55e-08;41!UBERON:0001890;1.55e-08;41!UBERON:0000073;1.48e-07;53!UBERON:0002616;1.48e-07;53!UBERON:0001893;2.05e-07;34!UBERON:0007023;2.14e-07;114!UBERON:0003528;2.39e-07;34!UBERON:0002020;2.39e-07;34!UBERON:0002791;2.92e-07;32!UBERON:0001869;4.50e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.55e-08;41!UBERON:0001890;1.55e-08;41!UBERON:0000073;1.48e-07;53!UBERON:0002616;1.48e-07;53!UBERON:0001893;2.05e-07;34!UBERON:0007023;2.14e-07;114!UBERON:0003528;2.39e-07;34!UBERON:0002020;2.39e-07;34!UBERON:0002791;2.92e-07;32!UBERON:0001869;4.50e-07;32 | ||
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| ||
|short_description=p2@ECD | |short_description=p2@ECD | ||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p2@ECD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ECD_5end |
Coexpression cluster: | C3044_Eosinophils_CD4_Neutrophils_CD34_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000372979_5end |
EntrezGene: | ECD |
HGNC: | 17029 |
UniProt: | O95905 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.27e-18 | 168 |
leukocyte | 8.37e-18 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-15 | 161 |
hematopoietic cell | 9.94e-15 | 177 |
lymphoid lineage restricted progenitor cell | 1.27e-13 | 52 |
lymphocyte | 2.31e-13 | 53 |
common lymphoid progenitor | 2.31e-13 | 53 |
hematopoietic lineage restricted progenitor cell | 1.20e-12 | 120 |
nongranular leukocyte | 5.39e-12 | 115 |
mature alpha-beta T cell | 2.92e-11 | 18 |
alpha-beta T cell | 2.92e-11 | 18 |
immature T cell | 2.92e-11 | 18 |
mature T cell | 2.92e-11 | 18 |
immature alpha-beta T cell | 2.92e-11 | 18 |
T cell | 7.03e-10 | 25 |
pro-T cell | 7.03e-10 | 25 |
CD8-positive, alpha-beta T cell | 9.25e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.37e-25 | 114 |
neural tube | 1.65e-12 | 56 |
neural rod | 1.65e-12 | 56 |
future spinal cord | 1.65e-12 | 56 |
neural keel | 1.65e-12 | 56 |
regional part of nervous system | 7.16e-12 | 53 |
regional part of brain | 7.16e-12 | 53 |
regional part of forebrain | 3.67e-11 | 41 |
forebrain | 3.67e-11 | 41 |
anterior neural tube | 3.67e-11 | 41 |
future forebrain | 3.67e-11 | 41 |
telencephalon | 1.24e-08 | 34 |
brain grey matter | 1.36e-08 | 34 |
gray matter | 1.36e-08 | 34 |
brain | 2.75e-08 | 68 |
future brain | 2.75e-08 | 68 |
regional part of telencephalon | 6.19e-08 | 32 |
cerebral hemisphere | 9.57e-08 | 32 |
central nervous system | 2.54e-07 | 81 |
nervous system | 8.37e-07 | 89 |