FFCP PHASE1:Hg19::chr21:27108013..27108026,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:27108013..27108026,-
|short_description=p6@ATP5J
|description=CAGE_peak_6_at_ATP5J_5end
|association_with_transcript=-29bp_to_ENST00000400093_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=522 | |EntrezGene=522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=847 | |HGNC=847 | ||
|TSSclassifier=strong | |||
|UniProt=P18859 | |UniProt=P18859 | ||
|association_with_transcript=-29bp_to_ENST00000400093_5end | |||
|cluster_id=chr21:27108013..27108026,- | |||
|description=CAGE_peak_6_at_ATP5J_5end | |||
|id=chr21:27108013..27108026,- | |||
|ontology_enrichment_celltype=CL:0000222!9.41e-12!119;CL:0000548!2.16e-11!679;CL:0000004!2.16e-11!679;CL:0000255!2.16e-11!679;CL:0000213!3.86e-11!57;CL:0000215!3.86e-11!57;CL:0000012!3.87e-11!682;CL:0000144!8.71e-11!625;CL:0002371!7.95e-08!591;CL:0000220!2.66e-07!246;CL:0002321!6.33e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002494;2.69e-07;16!CL:0000213;6.25e-07;58!CL:0000215;6.25e-07;58!CL:0000077;6.32e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.81e-12,58;CL:0000215,2.81e-12,58;CL:0000222,4.80e-11,121;CL:0002494,1.80e-07,16;CL:0000077,5.52e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.75e-10!84;UBERON:0004535!5.33e-09!110;UBERON:0001009!6.93e-09!113;UBERON:0002049!1.06e-07!79;UBERON:0007798!1.06e-07!79;UBERON:0000055!2.47e-07!69;UBERON:0000926!8.28e-07!448;UBERON:0004120!8.28e-07!448;UBERON:0006603!8.28e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,9.48e-09,83;UBERON:0000926,2.72e-08,315;UBERON:0004120,2.72e-08,315;UBERON:0006603,2.72e-08,315;UBERON:0004535,7.51e-08,109;UBERON:0003081,1.78e-07,203;UBERON:0001009,2.36e-07,112;UBERON:0003914,2.55e-07,117 | |||
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| ||
|short_description=p6@ATP5J | |||
}} | }} |
Latest revision as of 22:29, 17 September 2015
Short description: | p6@ATP5J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ATP5J_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000400093_5end |
EntrezGene: | ATP5J |
HGNC: | 847 |
UniProt: | P18859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.81e-12 | 58 |
barrier cell | 2.81e-12 | 58 |
mesodermal cell | 4.80e-11 | 121 |
cardiocyte | 1.80e-07 | 16 |
mesothelial cell | 5.52e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 9.48e-09 | 83 |
mesoderm | 2.72e-08 | 315 |
mesoderm-derived structure | 2.72e-08 | 315 |
presumptive mesoderm | 2.72e-08 | 315 |
cardiovascular system | 7.51e-08 | 109 |
lateral plate mesoderm | 1.78e-07 | 203 |
circulatory system | 2.36e-07 | 112 |
epithelial tube | 2.55e-07 | 117 |