FFCP PHASE1:Hg19::chr12:6443355..6443377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7132 | |EntrezGene=7132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11916 | |HGNC=11916 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000437813_5end | |association_with_transcript=32bp_to_ENST00000437813_5end | ||
|cluster_id=chr12:6443355..6443377,- | |||
|description=CAGE_peak_6_at_TNFRSF1A_5end | |description=CAGE_peak_6_at_TNFRSF1A_5end | ||
|id=chr12:6443355..6443377,- | |id=chr12:6443355..6443377,- | ||
|ontology_enrichment_celltype=CL:0000860!1.98e-10!45;CL:0002057!3.60e-10!42;CL:0002009!9.81e-08!65;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63;CL:0000144!3.43e-07!625;CL:0002371!3.68e-07!591 | |ontology_enrichment_celltype=CL:0000860!1.98e-10!45;CL:0002057!3.60e-10!42;CL:0002009!9.81e-08!65;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63;CL:0000144!3.43e-07!625;CL:0002371!3.68e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-21;33!CL:0002057;1.84e-21;33!CL:0000473;6.31e-17;39!CL:0000234;6.31e-17;39!CL:0000576;5.20e-09;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.84e-21;33!CL:0002057;1.84e-21;33!CL:0000473;6.31e-17;39!CL:0000234;6.31e-17;39!CL:0000576;5.20e-09;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.20e-16,48;CL:0000234,3.20e-16,48;CL:0000860,8.72e-16,42;CL:0002057,8.72e-16,42;CL:0002194,7.28e-11,59;CL:0000576,7.28e-11,59;CL:0000040,7.28e-11,59;CL:0000559,7.28e-11,59;CL:0002009,3.41e-10,61;CL:0000766,1.75e-09,72;CL:0000839,1.02e-08,66;CL:0000557,1.87e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-12;42 | |ontology_enrichment_development_v019=CL:0002057;1.53e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.64e-09!448;UBERON:0004120!3.64e-09!448;UBERON:0006603!3.64e-09!448;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.40e-07!626;UBERON:0000468!2.69e-07!659 | |ontology_enrichment_uberon=UBERON:0000926!3.64e-09!448;UBERON:0004120!3.64e-09!448;UBERON:0006603!3.64e-09!448;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.40e-07!626;UBERON:0000468!2.69e-07!659 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.26e-11,167;UBERON:0000926,4.12e-11,315;UBERON:0004120,4.12e-11,315;UBERON:0006603,4.12e-11,315;UBERON:0001434,5.39e-10,100;UBERON:0004765,9.40e-10,90;UBERON:0002371,5.14e-09,76;UBERON:0003081,1.62e-08,203;UBERON:0001474,3.81e-08,82;UBERON:0002390,1.13e-07,98;UBERON:0003061,1.13e-07,98;UBERON:0002193,1.67e-07,108;UBERON:0002405,3.33e-07,93 | |||
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| ||
|short_description=p6@TNFRSF1A | |short_description=p6@TNFRSF1A | ||
}} | }} |
Latest revision as of 20:08, 19 September 2015
Short description: | p6@TNFRSF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TNFRSF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000437813_5end |
EntrezGene: | TNFRSF1A |
HGNC: | 11916 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.20e-16 | 48 |
phagocyte | 3.20e-16 | 48 |
classical monocyte | 8.72e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.72e-16 | 42 |
monopoietic cell | 7.28e-11 | 59 |
monocyte | 7.28e-11 | 59 |
monoblast | 7.28e-11 | 59 |
promonocyte | 7.28e-11 | 59 |
macrophage dendritic cell progenitor | 3.41e-10 | 61 |
myeloid leukocyte | 1.75e-09 | 72 |
myeloid lineage restricted progenitor cell | 1.02e-08 | 66 |
granulocyte monocyte progenitor cell | 1.87e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.26e-11 | 167 |
mesoderm | 4.12e-11 | 315 |
mesoderm-derived structure | 4.12e-11 | 315 |
presumptive mesoderm | 4.12e-11 | 315 |
skeletal system | 5.39e-10 | 100 |
skeletal element | 9.40e-10 | 90 |
bone marrow | 5.14e-09 | 76 |
lateral plate mesoderm | 1.62e-08 | 203 |
bone element | 3.81e-08 | 82 |
hematopoietic system | 1.13e-07 | 98 |
blood island | 1.13e-07 | 98 |
hemolymphoid system | 1.67e-07 | 108 |
immune system | 3.33e-07 | 93 |