FFCP PHASE1:Hg19::chr21:37432832..37432874,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:37432832..37432874,-
|short_description=p3@SETD4
|description=CAGE_peak_3_at_SETD4_5end
|association_with_transcript=0bp_to_ENST00000332131_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54093 | |EntrezGene=54093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1258 | |HGNC=1258 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVD3 | |UniProt=Q9NVD3 | ||
|association_with_transcript=0bp_to_ENST00000332131_5end | |||
|cluster_id=chr21:37432832..37432874,- | |||
|description=CAGE_peak_3_at_SETD4_5end | |||
|id=chr21:37432832..37432874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.12e-07!57;UBERON:0005068!5.12e-07!57;UBERON:0006241!5.12e-07!57;UBERON:0007135!5.12e-07!57;UBERON:0002616!8.79e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.09e-08,53;UBERON:0002616,9.09e-08,53;UBERON:0001049,1.00e-07,56;UBERON:0005068,1.00e-07,56;UBERON:0006241,1.00e-07,56;UBERON:0007135,1.00e-07,56;UBERON:0003528,1.13e-07,34;UBERON:0002020,1.13e-07,34;UBERON:0001893,1.31e-07,34;UBERON:0002791,1.35e-07,32;UBERON:0002420,8.58e-07,9;UBERON:0007245,8.58e-07,9;UBERON:0010009,8.58e-07,9;UBERON:0010011,8.58e-07,9;UBERON:0000454,8.58e-07,9;UBERON:0001869,9.84e-07,32 | |||
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| ||
|short_description=p3@SETD4 | |||
}} | }} |
Latest revision as of 07:21, 18 September 2015
Short description: | p3@SETD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SETD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000332131_5end |
EntrezGene: | SETD4 |
HGNC: | 1258 |
UniProt: | Q9NVD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.09e-08 | 53 |
regional part of brain | 9.09e-08 | 53 |
neural tube | 1.00e-07 | 56 |
neural rod | 1.00e-07 | 56 |
future spinal cord | 1.00e-07 | 56 |
neural keel | 1.00e-07 | 56 |
brain grey matter | 1.13e-07 | 34 |
gray matter | 1.13e-07 | 34 |
telencephalon | 1.31e-07 | 34 |
regional part of telencephalon | 1.35e-07 | 32 |
basal ganglion | 8.58e-07 | 9 |
nuclear complex of neuraxis | 8.58e-07 | 9 |
aggregate regional part of brain | 8.58e-07 | 9 |
collection of basal ganglia | 8.58e-07 | 9 |
cerebral subcortex | 8.58e-07 | 9 |
cerebral hemisphere | 9.84e-07 | 32 |