FFCP PHASE1:Hg19::chr12:14996486..14996500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=420 | |EntrezGene=420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=726 | |HGNC=726 | ||
|TSSclassifier=strong | |||
|UniProt=Q93070 | |UniProt=Q93070 | ||
|association_with_transcript=-57bp_to_ENST00000228936_5end | |association_with_transcript=-57bp_to_ENST00000228936_5end | ||
|cluster_id=chr12:14996486..14996500,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_3_at_ART4_5end | |description=CAGE_peak_3_at_ART4_5end | ||
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|ontology_enrichment_celltype=CL:0000181!7.87e-13!12;CL:0000417!7.87e-13!12;CL:0000668!7.87e-13!12;CL:0000414!7.87e-13!12;CL:0000412!7.87e-13!12;CL:0000182!7.87e-13!12;CL:0000349!6.55e-09!3;CL:0002577!6.55e-09!3;CL:0002541!8.68e-09!3;CL:0002139!3.67e-08!24;CL:0002618!1.54e-07!3 | |ontology_enrichment_celltype=CL:0000181!7.87e-13!12;CL:0000417!7.87e-13!12;CL:0000668!7.87e-13!12;CL:0000414!7.87e-13!12;CL:0000412!7.87e-13!12;CL:0000182!7.87e-13!12;CL:0000349!6.55e-09!3;CL:0002577!6.55e-09!3;CL:0002541!8.68e-09!3;CL:0002139!3.67e-08!24;CL:0002618!1.54e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.13e-46;19!CL:0002577;9.00e-28;3!CL:0000182;7.62e-27;12!CL:0002536;8.58e-19;2!CL:0002537;2.98e-17;5!CL:0002541;2.97e-13;3 | |ontology_enrichment_celltype_v019=CL:0000349;3.13e-46;19!CL:0002577;9.00e-28;3!CL:0000182;7.62e-27;12!CL:0002536;8.58e-19;2!CL:0002537;2.98e-17;5!CL:0002541;2.97e-13;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.06e-46,19;CL:0002577,1.19e-27,3;CL:0000182,7.80e-27,12;CL:0002536,5.96e-19,2;CL:0002537,3.07e-17,5;CL:0002541,2.97e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.13e-13;11!UBERON:0009497;2.28e-11;13!UBERON:0000358;2.08e-10;1 | |ontology_enrichment_development_v019=UBERON:0004161;2.13e-13;11!UBERON:0009497;2.28e-11;13!UBERON:0000358;2.08e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000478;5.79e-44;24!UBERON:0005631;7.39e-44;10!UBERON:0000158;7.39e-44;10!UBERON:0000305;2.34e-32;7!UBERON:0002107;1.06e-22;19!UBERON:0006925;1.06e-22;19!UBERON:0001987;5.29e-21;4!UBERON:0002423;4.27e-17;25!UBERON:0002365;2.09e-13;31!UBERON:0002330;2.09e-13;31!UBERON:0003124;2.97e-13;3!UBERON:0000920;2.97e-13;3!UBERON:0002368;2.41e-11;33!UBERON:0000949;3.29e-09;43!UBERON:0004923;4.40e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0000478;5.79e-44;24!UBERON:0005631;7.39e-44;10!UBERON:0000158;7.39e-44;10!UBERON:0000305;2.34e-32;7!UBERON:0002107;1.06e-22;19!UBERON:0006925;1.06e-22;19!UBERON:0001987;5.29e-21;4!UBERON:0002423;4.27e-17;25!UBERON:0002365;2.09e-13;31!UBERON:0002330;2.09e-13;31!UBERON:0003124;2.97e-13;3!UBERON:0000920;2.97e-13;3!UBERON:0002368;2.41e-11;33!UBERON:0000949;3.29e-09;43!UBERON:0004923;4.40e-07;55 | ||
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|short_description=p3@ART4 | |short_description=p3@ART4 | ||
}} | }} |
Latest revision as of 13:51, 17 September 2015
Short description: | p3@ART4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ART4_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -57bp_to_ENST00000228936_5end |
EntrezGene: | ART4 |
HGNC: | 726 |
UniProt: | Q93070 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.06e-46 | 19 |
placental epithelial cell | 1.19e-27 | 3 |
hepatocyte | 7.80e-27 | 12 |
amniotic epithelial cell | 5.96e-19 | 2 |
amnion mesenchymal stem cell | 3.07e-17 | 5 |
chorionic membrane mesenchymal stem cell | 2.97e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.22e-63 | 14 |
membranous layer | 3.22e-63 | 14 |
extraembryonic structure | 5.45e-44 | 24 |
amnion | 1.86e-32 | 7 |
chorion | 2.58e-32 | 7 |
somatic layer of lateral plate mesoderm | 2.11e-28 | 8 |
liver | 9.43e-23 | 19 |
digestive gland | 9.43e-23 | 19 |
liver bud | 9.43e-23 | 19 |
placenta | 6.50e-21 | 4 |
allantois | 6.50e-21 | 4 |
hepatic diverticulum | 1.46e-19 | 22 |
liver primordium | 1.46e-19 | 22 |
digestive tract diverticulum | 1.11e-18 | 23 |
epithelial sac | 3.92e-17 | 25 |
epithelium of foregut-midgut junction | 3.92e-17 | 25 |
anatomical boundary | 3.92e-17 | 25 |
hepatobiliary system | 3.92e-17 | 25 |
foregut-midgut junction | 3.92e-17 | 25 |
septum transversum | 3.92e-17 | 25 |
sac | 1.90e-16 | 26 |
organ component layer | 6.47e-15 | 66 |
exocrine gland | 1.11e-13 | 31 |
exocrine system | 1.11e-13 | 31 |
egg chorion | 2.97e-13 | 3 |
endocrine gland | 4.89e-12 | 35 |
endocrine system | 3.36e-09 | 45 |
abdominal segment of trunk | 1.08e-08 | 60 |
abdomen | 1.08e-08 | 60 |
gut epithelium | 1.53e-07 | 54 |
abdomen element | 1.53e-07 | 54 |
abdominal segment element | 1.53e-07 | 54 |
gland | 7.72e-07 | 59 |