FFCP PHASE1:Hg19::chr22:19746969..19746987,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:19746969..19746987,+
|short_description=p2@TBX1
|description=CAGE_peak_2_at_TBX1_5end
|association_with_transcript=-177bp_to_GU014843_5end
|EntrezGene=68...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6899 | |EntrezGene=6899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11592 | |HGNC=11592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_GU014843_5end | |||
|cluster_id=chr22:19746969..19746987,+ | |||
|description=CAGE_peak_2_at_TBX1_5end | |||
|id=chr22:19746969..19746987,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.71e-18!24;CL:0000115!1.02e-17!35;CL:0002078!7.10e-14!44;CL:0000071!1.52e-10!18;CL:0002546!1.52e-10!18;CL:0005020!3.81e-10!6;CL:0002138!3.81e-10!6;CL:0005022!3.81e-10!6;CL:0000213!4.64e-10!57;CL:0000215!4.64e-10!57;CL:0002368!9.02e-10!13;CL:0002543!2.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.55e-18;6!CL:0002139;2.21e-18;24!CL:0000115;1.42e-13;36!CL:0002368;9.63e-13;13!CL:0002078;3.09e-11;45!CL:0000307;8.21e-10;3!CL:0002144;1.05e-09;3!CL:0002202;5.23e-08;9!CL:0002632;5.23e-08;9!CL:0000071;4.53e-07;18!CL:0000213;5.96e-07;58!CL:0000215;5.96e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.39e-18,6;CL:0002138,1.39e-18,6;CL:0005022,1.39e-18,6;CL:0002139,2.13e-18,24;CL:0000115,4.22e-17,36;CL:0002078,1.19e-14,45;CL:0002368,1.05e-12,13;CL:0000213,6.32e-12,58;CL:0000215,6.32e-12,58;CL:0000066,1.06e-10,253;CL:0000068,1.01e-09,3;CL:0000069,1.01e-09,3;CL:0000307,1.01e-09,3;CL:0000377,1.01e-09,3;CL:0002144,1.14e-09,3;CL:0002202,4.86e-08,9;CL:0002632,4.86e-08,9;CL:0000071,4.59e-07,18;CL:0002546,4.59e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;1.55e-18;6!CL:0000377;8.21e-10;3!UBERON:0008947;8.97e-08;29!CL:0002546;4.53e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.11e-15!53;UBERON:0001737!7.23e-13!9;UBERON:0001004!1.01e-12!72;UBERON:0001557!2.52e-12!19;UBERON:0000072!1.18e-11!46;UBERON:0008947!4.76e-11!38;UBERON:0003258!4.76e-11!38;UBERON:0001986!1.52e-10!18;UBERON:0004638!1.52e-10!18;UBERON:0004852!1.52e-10!18;UBERON:0002465!2.30e-09!10;UBERON:0000487!5.71e-08!22;UBERON:0006914!6.91e-08!25;UBERON:0000055!2.19e-07!69;UBERON:0000468!2.50e-07!659;UBERON:0001473!2.86e-07!8;UBERON:0004536!2.86e-07!8;UBERON:0006558!2.86e-07!8;UBERON:0002049!7.36e-07!79;UBERON:0007798!7.36e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.73e-19;9!UBERON:0001557;1.73e-19;9!UBERON:0000065;2.93e-14;44!UBERON:0002465;3.80e-14;10!UBERON:0001473;1.09e-13;8!UBERON:0004536;1.09e-13;8!UBERON:0006558;1.09e-13;8!UBERON:0000072;1.21e-12;37!UBERON:0010523;1.05e-09;3!UBERON:0001915;1.05e-09;3!UBERON:0001982;1.05e-09;3!UBERON:0001723;2.32e-09;3!UBERON:0001033;2.32e-09;3!UBERON:0001004;3.07e-08;65!UBERON:0004638;4.53e-07;18!UBERON:0001986;4.53e-07;18!UBERON:0004852;4.53e-07;18!UBERON:0003126;7.49e-07;7!UBERON:0001005;7.49e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.81e-19,9;UBERON:0000065,1.70e-17,54;UBERON:0001557,4.55e-16,19;UBERON:0000072,4.61e-15,47;UBERON:0002465,2.73e-14,10;UBERON:0001473,1.00e-13,8;UBERON:0004536,1.00e-13,8;UBERON:0006558,1.00e-13,8;UBERON:0008947,2.91e-13,38;UBERON:0003258,2.91e-13,38;UBERON:0001004,1.36e-12,74;UBERON:0010523,1.14e-09,3;UBERON:0001915,1.14e-09,3;UBERON:0001982,1.14e-09,3;UBERON:0001723,3.18e-09,3;UBERON:0001033,3.18e-09,3;UBERON:0010056,3.18e-09,3;UBERON:0000055,3.65e-07,68;UBERON:0004638,4.59e-07,18;UBERON:0001986,4.59e-07,18;UBERON:0004852,4.59e-07,18;UBERON:0001041,5.35e-07,87;UBERON:0003126,8.76e-07,7;UBERON:0001005,8.76e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,4.51808878167375,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,2.42998351125316,0,0,4.40188867104108,0.417989933073621,4.39308490587859,5.33649394030065,6.02497102976406,3.22263453687318,2.28081631715554,21.7215231217871,0,2.43042584364528,0.357198913136319,0.44905874525234,0.337834441449967,3.06633274931766,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94283284717341,1.05691048779388,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0.900273288253207,0.412210116953756,0,0,0.337552664482532,0.487185025805993,0.504867548488229,0.276149695926898,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.14073800139454,2.69735504124963,3.85617647813571,3.74999507290139,3.05031221729369,4.27087114399974,2.02246962240247,1.56977172100277,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0,0,0.98775256867763,0,0,1.20364978706088,0,0,0,0,0,6.78522304477047,6.94478268864916,4.56609965363036,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,9.18895486672911,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,4.00136416847742,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,5.14715135716284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,1.72279661398852,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,1.34533047155574,2.29702882490251,1.11273558941105,0,0,0,0,0,0,0,0,0,2.84741482246853,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,2.2054613741845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,2.11688647996127,10.0545341330368,4.3556393944529,0.0941438007767792,0.43050537267123,0,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,1.6023610669121,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0,0,0,35.0468177492469,1.39473591775749,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1787692703798,0,0.384751292518985,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,4.71493888244671,0.173559738335131,0,0,0,2.75177651954586,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,5.085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41123473186333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,1.24415452006595,0,0.754773679776773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,1.03973099535304,0,0,7.75773266253471,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,1.07028081699812,0.11294608203896,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0,2.36657343289777,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.71315621269373,3.7514978221865,0,0,1.91910583710883,1.42838658878244,0,0.248298857183432,0,0.318235791390825,1.0105859447911,4.13661821004227,4.79126621519393,0.606168477131288,0.78894425931944,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,4.51808878167375,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,2.42998351125316,0,0,4.40188867104108,0.417989933073621,4.39308490587859,5.33649394030065,6.02497102976406,3.22263453687318,2.28081631715554,21.7215231217871,0,2.43042584364528,0.357198913136319,0.44905874525234,0.337834441449967,3.06633274931766,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94283284717341,1.05691048779388,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0.900273288253207,0.412210116953756,0,0,0.337552664482532,0.487185025805993,0.504867548488229,0.276149695926898,0,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,4.14073800139454,2.69735504124963,3.85617647813571,3.74999507290139,3.05031221729369,4.27087114399974,2.02246962240247,1.56977172100277,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0,0,0.98775256867763,0,0,1.20364978706088,0,0,0,0,0,6.78522304477047,6.94478268864916,4.56609965363036,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87549826589899,9.18895486672911,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,4.00136416847742,1.08506009479894,0,0,0,0,0,0,0,0,0,0,0,5.14715135716284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,1.72279661398852,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,1.34533047155574,2.29702882490251,1.11273558941105,0,0,0,0,0,0,0,0,0,2.84741482246853,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0,0,0,2.2054613741845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,2.11688647996127,10.0545341330368,4.3556393944529,0.0941438007767792,0.43050537267123,0,2.66058092122005,1.60806380144872,0,0,0,0,0,0,0,0,1.6023610669121,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0,0,0,35.0468177492469,1.39473591775749,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1787692703798,0,0.384751292518985,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,4.71493888244671,0.173559738335131,0,0,0,2.75177651954586,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,5.085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41123473186333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,1.24415452006595,0,0.754773679776773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,1.03973099535304,0,0,7.75773266253471,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,1.07028081699812,0.11294608203896,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0,2.36657343289777,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.71315621269373,3.7514978221865,0,0,1.91910583710883,1.42838658878244,0,0.248298857183432,0,0.318235791390825,1.0105859447911,4.13661821004227,4.79126621519393,0.606168477131288,0.78894425931944,1.33064142618405,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p2@TBX1 | |||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p2@TBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -177bp_to_GU014843_5end |
EntrezGene: | TBX1 |
HGNC: | 11592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.39e-18 | 6 |
endothelial cell of lymphatic vessel | 1.39e-18 | 6 |
vascular lymphangioblast | 1.39e-18 | 6 |
endothelial cell of vascular tree | 2.13e-18 | 24 |
endothelial cell | 4.22e-17 | 36 |
meso-epithelial cell | 1.19e-14 | 45 |
respiratory epithelial cell | 1.05e-12 | 13 |
lining cell | 6.32e-12 | 58 |
barrier cell | 6.32e-12 | 58 |
epithelial cell | 1.06e-10 | 253 |
duct epithelial cell | 1.01e-09 | 3 |
branched duct epithelial cell | 1.01e-09 | 3 |
tracheal epithelial cell | 1.01e-09 | 3 |
tracheoblast | 1.01e-09 | 3 |
capillary endothelial cell | 1.14e-09 | 3 |
epithelial cell of tracheobronchial tree | 4.86e-08 | 9 |
epithelial cell of lower respiratory tract | 4.86e-08 | 9 |
blood vessel endothelial cell | 4.59e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.59e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.81e-19 | 9 |
respiratory tract | 1.70e-17 | 54 |
upper respiratory tract | 4.55e-16 | 19 |
segment of respiratory tract | 4.61e-15 | 47 |
lymphoid system | 2.73e-14 | 10 |
lymphatic vessel | 1.00e-13 | 8 |
lymph vasculature | 1.00e-13 | 8 |
lymphatic part of lymphoid system | 1.00e-13 | 8 |
respiratory primordium | 2.91e-13 | 38 |
endoderm of foregut | 2.91e-13 | 38 |
respiratory system | 1.36e-12 | 74 |
microcirculatory vessel | 1.14e-09 | 3 |
endothelium of capillary | 1.14e-09 | 3 |
capillary | 1.14e-09 | 3 |
tongue | 3.18e-09 | 3 |
gustatory system | 3.18e-09 | 3 |
future tongue | 3.18e-09 | 3 |
vessel | 3.65e-07 | 68 |
blood vessel endothelium | 4.59e-07 | 18 |
endothelium | 4.59e-07 | 18 |
cardiovascular system endothelium | 4.59e-07 | 18 |
foregut | 5.35e-07 | 87 |
trachea | 8.76e-07 | 7 |
respiratory airway | 8.76e-07 | 7 |