FFCP PHASE1:Hg19::chr14:51955760..51955769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000556137_5end | |association_with_transcript=-48bp_to_ENST00000556137_5end | ||
|cluster_id=chr14:51955760..51955769,+ | |||
|coexpression_cluster_id=C362 | |coexpression_cluster_id=C362 | ||
|description=CAGE_peak_29_at_FRMD6_5end | |description=CAGE_peak_29_at_FRMD6_5end | ||
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|ontology_enrichment_celltype=CL:0002076!3.22e-34!43;CL:0000223!1.77e-23!59;CL:0002159!4.95e-23!13;CL:0002368!8.54e-23!13;CL:0000066!1.10e-20!254;CL:0000244!1.70e-16!4;CL:0000731!1.70e-16!4;CL:0002251!3.28e-16!21;CL:0000076!2.65e-13!62;CL:0002621!8.72e-13!3;CL:0002166!1.19e-12!3;CL:0002328!1.34e-12!3;CL:0000362!3.12e-12!8;CL:0002077!4.40e-12!33;CL:0002202!8.81e-11!9;CL:0002632!8.81e-11!9;CL:0000240!1.09e-10!6;CL:0000311!1.09e-10!6;CL:0000079!1.09e-10!6;CL:0000237!1.09e-10!6;CL:0000036!1.09e-10!6;CL:0000357!1.09e-10!6;CL:0000114!1.09e-10!6;CL:0000220!7.82e-10!246;CL:0002321!1.08e-09!248;CL:0000317!3.00e-09!2;CL:1000448!3.00e-09!2;CL:0002308!3.00e-09!2;CL:0002140!3.00e-09!2;CL:0000312!1.64e-07!5 | |ontology_enrichment_celltype=CL:0002076!3.22e-34!43;CL:0000223!1.77e-23!59;CL:0002159!4.95e-23!13;CL:0002368!8.54e-23!13;CL:0000066!1.10e-20!254;CL:0000244!1.70e-16!4;CL:0000731!1.70e-16!4;CL:0002251!3.28e-16!21;CL:0000076!2.65e-13!62;CL:0002621!8.72e-13!3;CL:0002166!1.19e-12!3;CL:0002328!1.34e-12!3;CL:0000362!3.12e-12!8;CL:0002077!4.40e-12!33;CL:0002202!8.81e-11!9;CL:0002632!8.81e-11!9;CL:0000240!1.09e-10!6;CL:0000311!1.09e-10!6;CL:0000079!1.09e-10!6;CL:0000237!1.09e-10!6;CL:0000036!1.09e-10!6;CL:0000357!1.09e-10!6;CL:0000114!1.09e-10!6;CL:0000220!7.82e-10!246;CL:0002321!1.08e-09!248;CL:0000317!3.00e-09!2;CL:1000448!3.00e-09!2;CL:0002308!3.00e-09!2;CL:0002140!3.00e-09!2;CL:0000312!1.64e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.18e-36;2!CL:1000448;1.18e-36;2!CL:0002308;1.18e-36;2!CL:0002140;1.18e-36;2!CL:0002159;4.01e-32;14!CL:0002166;4.31e-25;3!CL:0002621;7.92e-25;3!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0000244;4.29e-19;4!CL:0000731;4.29e-19;4!CL:0000362;1.45e-18;9!CL:0000622;2.51e-15;5!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0000154;6.12e-13;6!CL:0002077;3.98e-12;34!CL:0000150;6.10e-09;9!CL:0002251;1.04e-08;20!CL:0002076;1.61e-08;42 | |ontology_enrichment_celltype_v019=CL:0000317;1.18e-36;2!CL:1000448;1.18e-36;2!CL:0002308;1.18e-36;2!CL:0002140;1.18e-36;2!CL:0002159;4.01e-32;14!CL:0002166;4.31e-25;3!CL:0002621;7.92e-25;3!CL:0002336;2.97e-19;1!CL:0002261;2.97e-19;1!CL:0002170;2.97e-19;1!CL:0000244;4.29e-19;4!CL:0000731;4.29e-19;4!CL:0000362;1.45e-18;9!CL:0000622;2.51e-15;5!CL:0000240;6.12e-13;6!CL:0000311;6.12e-13;6!CL:0000079;6.12e-13;6!CL:0000237;6.12e-13;6!CL:0000154;6.12e-13;6!CL:0002077;3.98e-12;34!CL:0000150;6.10e-09;9!CL:0002251;1.04e-08;20!CL:0002076;1.61e-08;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.42e-36,2;CL:1000448,1.42e-36,2;CL:0002308,1.42e-36,2;CL:0002140,1.42e-36,2;CL:0002159,4.43e-32,14;CL:0002166,2.99e-25,3;CL:0002621,8.95e-25,3;CL:0002336,3.25e-19,1;CL:0002261,3.25e-19,1;CL:0002170,3.25e-19,1;CL:0000244,3.26e-19,4;CL:0000731,3.26e-19,4;CL:0000362,1.90e-18,9;CL:0000622,2.70e-15,5;CL:0002077,2.53e-13,34;CL:0000154,6.50e-13,6;CL:0000240,7.78e-13,6;CL:0000311,7.78e-13,6;CL:0000079,7.78e-13,6;CL:0000237,7.78e-13,6;CL:0000036,7.78e-13,6;CL:0000357,7.78e-13,6;CL:0000114,7.78e-13,6;CL:0000150,6.36e-09,9;CL:0002251,1.08e-08,20;CL:0000221,1.31e-08,72;CL:0000066,6.20e-08,253;CL:0002076,3.36e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6 | |ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6 | ||
|ontology_enrichment_disease=DOID:1749!2.52e-19!14 | |ontology_enrichment_disease=DOID:1749!2.52e-19!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.64e-19!5;UBERON:0003729!1.05e-18!5;UBERON:0005910!3.27e-16!6;UBERON:0001004!4.27e-16!72;UBERON:0003343!5.84e-15!4;UBERON:0004785!5.84e-15!4;UBERON:0000344!4.23e-14!12;UBERON:0004119!6.38e-14!169;UBERON:0000925!6.38e-14!169;UBERON:0006595!6.38e-14!169;UBERON:0000166!6.94e-13!21;UBERON:0000161!8.54e-13!35;UBERON:0001949!8.72e-13!3;UBERON:0004815!1.34e-12!3;UBERON:0002031!1.34e-12!3;UBERON:0000165!1.39e-11!28;UBERON:0000930!1.39e-11!28;UBERON:0003102!3.91e-11!95;UBERON:0000065!9.70e-11!53;UBERON:0001003!1.19e-09!14;UBERON:0007376!1.19e-09!14;UBERON:0007383!1.19e-09!14;UBERON:0001708!1.37e-09!4;UBERON:0001704!1.37e-09!4;UBERON:0002185!1.49e-09!4;UBERON:0007196!2.49e-09!14;UBERON:0001558!2.49e-09!14;UBERON:0002419!3.00e-09!2;UBERON:0007771!3.00e-09!2;UBERON:0003297!3.00e-09!2;UBERON:0001821!3.00e-09!2;UBERON:0003487!3.00e-09!2;UBERON:0001820!3.00e-09!2;UBERON:0005089!3.00e-09!2;UBERON:0005088!3.00e-09!2;UBERON:0005178!1.86e-07!34;UBERON:0002224!1.86e-07!34;UBERON:0001444!2.77e-07!48;UBERON:0005181!3.37e-07!35;UBERON:0001007!3.56e-07!155;UBERON:0001555!3.56e-07!155;UBERON:0007026!3.56e-07!155 | |ontology_enrichment_uberon=UBERON:0000365!1.64e-19!5;UBERON:0003729!1.05e-18!5;UBERON:0005910!3.27e-16!6;UBERON:0001004!4.27e-16!72;UBERON:0003343!5.84e-15!4;UBERON:0004785!5.84e-15!4;UBERON:0000344!4.23e-14!12;UBERON:0004119!6.38e-14!169;UBERON:0000925!6.38e-14!169;UBERON:0006595!6.38e-14!169;UBERON:0000166!6.94e-13!21;UBERON:0000161!8.54e-13!35;UBERON:0001949!8.72e-13!3;UBERON:0004815!1.34e-12!3;UBERON:0002031!1.34e-12!3;UBERON:0000165!1.39e-11!28;UBERON:0000930!1.39e-11!28;UBERON:0003102!3.91e-11!95;UBERON:0000065!9.70e-11!53;UBERON:0001003!1.19e-09!14;UBERON:0007376!1.19e-09!14;UBERON:0007383!1.19e-09!14;UBERON:0001708!1.37e-09!4;UBERON:0001704!1.37e-09!4;UBERON:0002185!1.49e-09!4;UBERON:0007196!2.49e-09!14;UBERON:0001558!2.49e-09!14;UBERON:0002419!3.00e-09!2;UBERON:0007771!3.00e-09!2;UBERON:0003297!3.00e-09!2;UBERON:0001821!3.00e-09!2;UBERON:0003487!3.00e-09!2;UBERON:0001820!3.00e-09!2;UBERON:0005089!3.00e-09!2;UBERON:0005088!3.00e-09!2;UBERON:0005178!1.86e-07!34;UBERON:0002224!1.86e-07!34;UBERON:0001444!2.77e-07!48;UBERON:0005181!3.37e-07!35;UBERON:0001007!3.56e-07!155;UBERON:0001555!3.56e-07!155;UBERON:0007026!3.56e-07!155 | ||
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| ||
|short_description=p29@FRMD6 | |short_description=p29@FRMD6 | ||
}} | }} |
Latest revision as of 04:45, 20 September 2015
Short description: | p29@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | -48bp_to_ENST00000556137_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.42e-36 | 2 |
epithelial cell of sweat gland | 1.42e-36 | 2 |
epithelial cell of skin gland | 1.42e-36 | 2 |
acinar cell of sebaceous gland | 1.42e-36 | 2 |
general ecto-epithelial cell | 4.43e-32 | 14 |
epithelial cell of Malassez | 2.99e-25 | 3 |
gingival epithelial cell | 8.95e-25 | 3 |
buccal mucosa cell | 3.25e-19 | 1 |
endothelial cell of viscerocranial mucosa | 3.25e-19 | 1 |
keratinized cell of the oral mucosa | 3.25e-19 | 1 |
transitional epithelial cell | 3.26e-19 | 4 |
urothelial cell | 3.26e-19 | 4 |
epidermal cell | 1.90e-18 | 9 |
acinar cell | 2.70e-15 | 5 |
ecto-epithelial cell | 2.53e-13 | 34 |
protein secreting cell | 6.50e-13 | 6 |
stratified squamous epithelial cell | 7.78e-13 | 6 |
keratin accumulating cell | 7.78e-13 | 6 |
stratified epithelial cell | 7.78e-13 | 6 |
keratinizing barrier epithelial cell | 7.78e-13 | 6 |
epithelial fate stem cell | 7.78e-13 | 6 |
stratified epithelial stem cell | 7.78e-13 | 6 |
surface ectodermal cell | 7.78e-13 | 6 |
glandular epithelial cell | 6.36e-09 | 9 |
epithelial cell of alimentary canal | 1.08e-08 | 20 |
ectodermal cell | 1.31e-08 | 72 |
epithelial cell | 6.20e-08 | 253 |
endo-epithelial cell | 3.36e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.42e-36 | 2 |
epidermis gland | 1.42e-36 | 2 |
gland of integumental system | 1.42e-36 | 2 |
sebaceous gland | 1.42e-36 | 2 |
skin sebaceous gland | 1.42e-36 | 2 |
sweat gland | 1.42e-36 | 2 |
sweat gland placode | 1.42e-36 | 2 |
sebaceous gland placode | 1.42e-36 | 2 |
gingival epithelium | 8.95e-25 | 3 |
jaw skeleton | 3.26e-19 | 4 |
splanchnocranium | 3.26e-19 | 4 |
primary subdivision of cranial skeletal system | 1.40e-15 | 5 |
urothelium | 1.40e-15 | 5 |
transitional epithelium | 3.77e-13 | 6 |
protuberance | 3.77e-13 | 6 |
pharyngeal arch | 3.77e-13 | 6 |
embryonic head | 3.77e-13 | 6 |
mouth mucosa | 4.85e-13 | 13 |
skin epidermis | 2.42e-11 | 15 |
outer epithelium | 2.42e-11 | 15 |
enveloping layer of ectoderm | 2.42e-11 | 15 |
surface structure | 3.82e-11 | 99 |
epithelium of mucosa | 6.34e-10 | 8 |
gingiva | 6.34e-10 | 8 |
mucosa | 1.08e-08 | 20 |
head | 3.91e-08 | 56 |
cranial skeletal system | 1.37e-07 | 11 |
anterior region of body | 2.39e-07 | 62 |
craniocervical region | 2.39e-07 | 62 |