FFCP PHASE1:Hg19::chr2:217526641..217526672,+: Difference between revisions
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|id=chr2:217526641..217526672,+
|short_description=p@chr2:217526641..217526672,+
|description=CAGE_peak_at_chr2:217526641..217526672,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:217526641..217526672,+ | |||
|coexpression_cluster_id=C1891 | |||
|description=CAGE_peak_at_chr2:217526641..217526672,+ | |||
|id=chr2:217526641..217526672,+ | |||
|ontology_enrichment_celltype=CL:1000449!8.73e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.19e-07;15!CL:0000540;2.37e-07;6!CL:0000404;2.37e-07;6!CL:0002319;5.68e-07;25!CL:0002077;6.07e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.32e-12,72;CL:0000133,1.46e-09,59;CL:0000047,1.28e-08,8;CL:0002321,8.97e-08,250;CL:0002077,1.29e-07,34;CL:0000540,1.70e-07,6;CL:0000031,1.70e-07,6;CL:0000404,1.70e-07,6;CL:1000449,2.28e-07,15;CL:0002319,5.78e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.37e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.52e-09!173;UBERON:0006601!2.52e-09!173;UBERON:0001444!1.75e-08!48;UBERON:0004121!2.70e-08!169;UBERON:0003887!1.63e-07!21;UBERON:0000080!2.01e-07!18;UBERON:0002120!2.01e-07!18;UBERON:0004875!2.01e-07!18;UBERON:0005721!2.01e-07!18;UBERON:0005754!2.01e-07!18;UBERON:0007297!2.01e-07!18;UBERON:0006555!2.40e-07!17;UBERON:0005103!2.40e-07!17;UBERON:0000083!2.40e-07!17;UBERON:0009201!2.40e-07!17;UBERON:0004819!2.40e-07!17;UBERON:0006553!2.40e-07!17;UBERON:0003074!2.40e-07!17;UBERON:0003060!2.40e-07!17;UBERON:0002200!7.15e-07!11;UBERON:0006876!7.15e-07!11;UBERON:0004876!7.62e-07!20;UBERON:0004211!8.73e-07!16;UBERON:0001285!8.73e-07!16;UBERON:0007684!8.73e-07!16;UBERON:0003220!8.73e-07!16;UBERON:0004208!8.73e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.11e-10;11!UBERON:0000353;1.62e-07;15!UBERON:0006555;2.19e-07;15!UBERON:0004819;2.19e-07;15!UBERON:0001285;2.19e-07;15!UBERON:0007684;2.19e-07;15!UBERON:0001801;2.21e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.43e-10,11;UBERON:0006555,3.16e-08,16;UBERON:0004819,3.16e-08,16;UBERON:0005631,4.96e-08,14;UBERON:0000158,4.96e-08,14;UBERON:0004121,8.32e-08,171;UBERON:0000924,8.32e-08,171;UBERON:0006601,8.32e-08,171;UBERON:0001801,1.20e-07,14;UBERON:0000353,2.18e-07,15;UBERON:0004211,2.28e-07,15;UBERON:0009773,2.28e-07,15;UBERON:0001231,2.28e-07,15;UBERON:0001285,2.28e-07,15;UBERON:0007684,2.28e-07,15;UBERON:0004208,2.28e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,6.00439790118782,1.34088328328186,8.72338524100369,0,1.26343974685366,2.61185628199839,0,4.88460817580699,1.74753097704138,3.9565046734268,0.866364470720326,3.64537113300707,0,0,0,0,1.35433163884467,1.42800483870977,2.5076377718247,1.43117993565528,3.83248390204076,2.25976751270645,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.724232594804119,0,0.486634870302636,1.13441780596881,4.65631734671384,1.93236528524877,0.392937226493138,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,1.52054421143703,0.732186172644509,0,0,1.25019619597712,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,2.24271040056923,0,1.2333377420858,0.311211035399766,0.269421344139376,0.490385709340376,1.36221684880438,2.30470369792,0.937285727335186,0,0,0.597794722207204,0.822041490506354,0,0.140450806702248,1.22492502752936,4.42203542322365,3.09977343527296,1.18800285728205,0.741800787835671,0.910161361938026,0,0.505008341862199,0.625592599359821,0.277064115484183,0,1.22595118319608,0.751190294532984,0.340296549480063,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0.744467425326359,0,0.0974370051611986,0,0.0920498986422993,10.6686397500416,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,1.09776335516636,0.265059536642971,2.90484857173796,3.10983165046111,6.30802127189071,4.74470566798579,0,23.1566737749439,0,4.17931135228781,12.9938306700525,0,0,0,0,0,0,0,0,0,4.42893272774789,1.40241773803446,0,0,5.07020139287323,1.96565443335525,1.77236972004421,0,0.122988438543114,1.20097467208968,0.329250856225877,0,0,1.85176890317059,1.95484983186195,0,2.88662684050547,1.62302566965108,0.587043471179108,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0,0,0,3.02367830757947,2.41017665312057,0.0895585227028483,2.3250715081117,1.53353071666084,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,4.3596006883328,0.5867062865676,0,0,0,0,1.04007436911366,0.257207374262142,0,1.5985330740966,0,0,0,0,0.355391948742546,0,10.2489388200259,20.0452695478068,7.79789331220045,0,0,0,0.958499421966331,0,0,0.434343920002738,3.6985738059069,0,0,0,0,0,1.27047312111232,1.30139853857622,1.54657762555539,3.01529277601828,1.91381625495949,0,0,0,0.858840442033979,2.00068208423871,1.08506009479894,8.31883446123229,12.3116002270042,5.99269177128952,6.79420206957737,1.80567659836631,11.3703752027992,1.03473071292505,0,0,0.60818530127658,1.37060810223918,5.14715135716284,0,0,0,2.12189300012382,9.98612637062982,7.55975733324201,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40860999515584,0.0920809889358963,0.114814448164607,0,7.34296723772775,0.451199612907412,2.31046011313244,2.35304930753057,1.46139224653261,1.79437769117889,1.13733384070897,0.680374821106063,0.431831832204279,1.54227252690289,1.35473218771926,4.51520796469368,0,3.3243040357149,3.1342465661105,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.412164046590889,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0,0.435050081742686,0.255679882248303,0.0890320356467374,2.97512847649761,0.576570202095319,0,0.708104465988849,0,0,0,0,0,0,0,0.572499546967965,1.48863347743867,2.21465597303108,1.71567174531442,0.511795582622668,0.42793898803392,0,0,0,0,0,0,1.58510321173008,0,0.975267478179181,0,0,1.77449884830381,0,0,0,0,3.06915619677634,1.73632660280006,0,2.02910376962704,1.54911749049875,1.69017361519345,0.286822704408103,0,2.85336841185,3.90237170477658,0.422215270595328,0,1.51789269506286,8.74836800612457,0,1.34060455107157,0,0.659006605437454,0.86101074534246,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,1.28055318027145,0.797131363644112,0.399158742865633,5.1706449935739,0,0.649243880549111,1.96558024679421,0,0,7.51903431270201,0,0,0,0,2.06103206853459,0,0,0,0.586164286206121,0,0,0,0.66614393599564,0,0,0.146508179271894,0.36408156524854,0,0.284136146806413,1.19372242368845,2.67268212749375,2.45728561679386,0,0,0,0,0.422250816255987,0.597743964753209,0,3.02319297425131,0.613612095012929,0,12.1305439188105,0,0,0,0.394573622547734,0,0,0,0.278304294485554,1.99613798001194,0.520855522170466,0.437299999980979,0.724999575434793,1.0241410345695,0.254253650292766,0,0,1.16641845353302,0.173624994933292,0,0,0,0,0,0.438770794307945,0,1.25481369850743,0.153900517007594,1.48124672601102,0,0,0,1.91400695839152,0.274792780205587,1.06606955203727,24.5263915669768,1.72678282034527,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,1.99052386215701,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0.182454789215666,0.391329237864179,0,1.97292201424695,0,1.22429104652196,0.063186579628488,0.300646838828985,0,0,0,0,0,0.284609546029793,0,1.90915712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| ||
|short_description=p@chr2:217526641..217526672,+ | |||
}} | }} |
Latest revision as of 06:24, 29 July 2015
Short description: | p@chr2:217526641..217526672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217526641..217526672, + |
Coexpression cluster: | C1891_Mesothelial_Placental_mesenchymal_Osteoblast_basal_leiomyoma_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.32e-12 | 72 |
neurectodermal cell | 1.46e-09 | 59 |
neuronal stem cell | 1.28e-08 | 8 |
embryonic cell | 8.97e-08 | 250 |
ecto-epithelial cell | 1.29e-07 | 34 |
neuron | 1.70e-07 | 6 |
neuroblast | 1.70e-07 | 6 |
electrically signaling cell | 1.70e-07 | 6 |
epithelial cell of nephron | 2.28e-07 | 15 |
neural cell | 5.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 2.43e-10 | 11 |
excretory tube | 3.16e-08 | 16 |
kidney epithelium | 3.16e-08 | 16 |
extraembryonic membrane | 4.96e-08 | 14 |
membranous layer | 4.96e-08 | 14 |
ectoderm-derived structure | 8.32e-08 | 171 |
ectoderm | 8.32e-08 | 171 |
presumptive ectoderm | 8.32e-08 | 171 |
anterior segment of eyeball | 1.20e-07 | 14 |
parenchyma | 2.18e-07 | 15 |
nephron epithelium | 2.28e-07 | 15 |
renal tubule | 2.28e-07 | 15 |
nephron tubule | 2.28e-07 | 15 |
nephron | 2.28e-07 | 15 |
uriniferous tubule | 2.28e-07 | 15 |
nephrogenic mesenchyme | 2.28e-07 | 15 |