FFCP PHASE1:Hg19::chr2:231808435..231808449,+: Difference between revisions
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|id=chr2:231808435..231808449,+
|short_description=p@chr2:231808435..231808449,+
|description=CAGE_peak_at_chr2:231808435..231808449,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:231808435..231808449,+ | |||
|coexpression_cluster_id=C730 | |||
|description=CAGE_peak_at_chr2:231808435..231808449,+ | |||
|id=chr2:231808435..231808449,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.05e-19!140;CL:0000453!4.58e-19!5;CL:0000988!1.31e-18!182;CL:0002031!6.17e-17!124;CL:0002087!5.48e-16!119;CL:0002032!6.11e-16!165;CL:0000837!6.11e-16!165;CL:0000990!7.14e-16!8;CL:0000037!4.41e-15!172;CL:0000566!4.41e-15!172;CL:0000451!6.03e-13!10;CL:0002057!2.26e-11!42;CL:0000945!8.74e-11!24;CL:0000826!8.74e-11!24;CL:0000860!1.69e-10!45;CL:0002009!1.03e-09!65;CL:0000080!1.51e-09!6;CL:0000838!3.85e-09!52;CL:0000542!6.18e-09!53;CL:0000051!6.18e-09!53;CL:0000557!1.03e-08!71;CL:0002194!2.39e-08!63;CL:0000576!2.39e-08!63;CL:0000040!2.39e-08!63;CL:0000559!2.39e-08!63;CL:0000763!5.38e-08!112;CL:0000049!5.38e-08!112;CL:0000839!2.48e-07!70;CL:0000946!2.66e-07!1;CL:0000786!2.66e-07!1;CL:0000980!2.66e-07!1;CL:0002127!5.37e-07!1;CL:0000914!5.37e-07!1;CL:0000911!5.37e-07!1;CL:0000814!5.37e-07!1;CL:0002042!5.37e-07!1;CL:0002039!5.37e-07!1;CL:0002040!5.37e-07!1;CL:0002041!5.37e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.25e-45;5!CL:0000990;1.44e-25;8!CL:0000451;5.38e-21;10!CL:0000946;1.78e-15;1!CL:0000786;1.78e-15;1!CL:0001014;2.15e-08;2!CL:0001016;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.99e-45,5;CL:0000990,1.86e-25,8;CL:0000451,6.62e-21,10;CL:0000946,9.99e-16,1;CL:0000786,9.99e-16,1;CL:0000980,9.99e-16,1;CL:0000988,3.47e-12,177;CL:0000738,2.82e-09,136;CL:0000785,1.61e-08,2;CL:0000955,1.61e-08,2;CL:0000818,1.61e-08,2;CL:0000954,1.61e-08,2;CL:0000816,1.61e-08,2;CL:0001014,2.15e-08,2;CL:0001016,2.15e-08,2;CL:0002032,1.14e-07,161;CL:0000837,1.14e-07,161;CL:0000037,2.64e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000954;2.15e-08;2 | |||
|ontology_enrichment_disease=DOID:630!4.25e-07!1;DOID:0050177!4.25e-07!1;DOID:0050427!4.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.78e-15;1!DOID:0050177;1.78e-15;1!DOID:0050427;1.78e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.17e-15,1;DOID:0050177,3.17e-15,1;DOID:0050427,3.17e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.59e-12!112;UBERON:0002390!4.04e-12!102;UBERON:0003061!4.04e-12!102;UBERON:0002405!1.29e-07!115;UBERON:0002371!1.70e-07!80;UBERON:0001474!7.91e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.41e-13;10!UBERON:0000178;3.03e-09;15!UBERON:0000179;3.03e-09;15!UBERON:0000463;3.03e-09;15!UBERON:0002390;2.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.24e-13,10;UBERON:0000358,1.24e-13,10;UBERON:0000307,1.24e-13,10;UBERON:0000091,1.24e-13,10;UBERON:0000087,1.24e-13,10;UBERON:0007010,1.24e-13,10;UBERON:0007806,1.24e-13,10;UBERON:0008780,1.24e-13,10;UBERON:0005728,1.24e-13,10;UBERON:0000178,2.79e-09,15;UBERON:0000179,2.79e-09,15;UBERON:0000463,2.79e-09,15 | |||
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|short_description=p@chr2:231808435..231808449,+ | |||
}} | }} |
Latest revision as of 07:34, 29 July 2015
Short description: | p@chr2:231808435..231808449, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:231808435..231808449, + |
Coexpression cluster: | C730_migratory_cord_Mast_B_b_CD14_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.99e-45 | 5 |
conventional dendritic cell | 1.86e-25 | 8 |
dendritic cell | 6.62e-21 | 10 |
antibody secreting cell | 9.99e-16 | 1 |
plasma cell | 9.99e-16 | 1 |
plasmablast | 9.99e-16 | 1 |
hematopoietic cell | 3.47e-12 | 177 |
leukocyte | 2.82e-09 | 136 |
mature B cell | 1.61e-08 | 2 |
pre-B-II cell | 1.61e-08 | 2 |
transitional stage B cell | 1.61e-08 | 2 |
small pre-B-II cell | 1.61e-08 | 2 |
immature B cell | 1.61e-08 | 2 |
CD1a-positive Langerhans cell | 2.15e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.15e-08 | 2 |
hematopoietic oligopotent progenitor cell | 1.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-07 | 161 |
hematopoietic stem cell | 2.64e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.24e-13 | 10 |
blastocyst | 1.24e-13 | 10 |
blastula | 1.24e-13 | 10 |
bilaminar disc | 1.24e-13 | 10 |
inner cell mass | 1.24e-13 | 10 |
cleaving embryo | 1.24e-13 | 10 |
connecting stalk | 1.24e-13 | 10 |
inner cell mass derived epiblast | 1.24e-13 | 10 |
extraembryonic mesoderm | 1.24e-13 | 10 |
blood | 2.79e-09 | 15 |
haemolymphatic fluid | 2.79e-09 | 15 |
organism substance | 2.79e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.17e-15 | 1 |
monogenic disease | 3.17e-15 | 1 |
xeroderma pigmentosum | 3.17e-15 | 1 |