FFCP PHASE1:Mm9::chr3:130722600..130722614,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:130722600..130722614,- | |||
|description=CAGE_peak_at_chr3:130722600..130722614,- | |description=CAGE_peak_at_chr3:130722600..130722614,- | ||
|id=chr3:130722600..130722614,- | |id=chr3:130722600..130722614,- | ||
|ontology_enrichment_celltype=CL:0000791!5.81e-13!9;CL:0000789!5.81e-13!9;CL:0002420!5.81e-13!9;CL:0002419!5.81e-13!9;CL:0000790!5.81e-13!9;CL:0000838!1.47e-11!12;CL:0000624!1.53e-11!8;CL:0000542!1.86e-10!13;CL:0000051!1.86e-10!13;CL:0002031!1.91e-10!25;CL:0000084!3.55e-10!11;CL:0000827!3.55e-10!11;CL:0000988!1.11e-09!32;CL:0002032!1.11e-09!32;CL:0000037!1.11e-09!32;CL:0000566!1.11e-09!32;CL:0000837!1.11e-09!32;CL:0000893!1.12e-08!6;CL:0002489!1.12e-08!6;CL:0000898!1.12e-08!6;CL:0000809!1.12e-08!6;CL:0000810!1.12e-08!6;CL:0000895!1.12e-08!6;CL:0000808!1.12e-08!6;CL:0000894!1.12e-08!6;CL:0000806!1.12e-08!6;CL:0000807!1.12e-08!6;CL:0000805!1.12e-08!6;CL:0002425!1.12e-08!6;CL:0002436!1.12e-08!6;CL:0002427!1.12e-08!6;CL:0002428!1.12e-08!6;CL:0002429!1.12e-08!6;CL:0002433!1.12e-08!6;CL:0002431!1.12e-08!6;CL:0002432!1.12e-08!6;CL:0000738!2.24e-07!17;CL:0002087!2.24e-07!17 | |ontology_enrichment_celltype=CL:0000791!5.81e-13!9;CL:0000789!5.81e-13!9;CL:0002420!5.81e-13!9;CL:0002419!5.81e-13!9;CL:0000790!5.81e-13!9;CL:0000838!1.47e-11!12;CL:0000624!1.53e-11!8;CL:0000542!1.86e-10!13;CL:0000051!1.86e-10!13;CL:0002031!1.91e-10!25;CL:0000084!3.55e-10!11;CL:0000827!3.55e-10!11;CL:0000988!1.11e-09!32;CL:0002032!1.11e-09!32;CL:0000037!1.11e-09!32;CL:0000566!1.11e-09!32;CL:0000837!1.11e-09!32;CL:0000893!1.12e-08!6;CL:0002489!1.12e-08!6;CL:0000898!1.12e-08!6;CL:0000809!1.12e-08!6;CL:0000810!1.12e-08!6;CL:0000895!1.12e-08!6;CL:0000808!1.12e-08!6;CL:0000894!1.12e-08!6;CL:0000806!1.12e-08!6;CL:0000807!1.12e-08!6;CL:0000805!1.12e-08!6;CL:0002425!1.12e-08!6;CL:0002436!1.12e-08!6;CL:0002427!1.12e-08!6;CL:0002428!1.12e-08!6;CL:0002429!1.12e-08!6;CL:0002433!1.12e-08!6;CL:0002431!1.12e-08!6;CL:0002432!1.12e-08!6;CL:0000738!2.24e-07!17;CL:0002087!2.24e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.15e-15,12;CL:0000791,4.55e-14,9;CL:0000789,4.55e-14,9;CL:0002420,4.55e-14,9;CL:0002419,4.55e-14,9;CL:0000790,4.55e-14,9;CL:0000542,9.33e-14,13;CL:0000051,9.33e-14,13;CL:0000084,1.73e-11,11;CL:0000827,1.73e-11,11;CL:0000624,1.89e-10,8;CL:0000738,2.04e-10,17;CL:0002087,2.04e-10,17;CL:0002031,2.50e-09,25;CL:0000988,4.01e-07,32;CL:0002032,4.01e-07,32;CL:0000037,4.01e-07,32;CL:0000837,4.01e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.41e-23!24;UBERON:0002370!2.19e-22!23;UBERON:0000974!2.19e-22!23;UBERON:0004807!2.19e-22!23;UBERON:0005058!2.19e-22!23;UBERON:0003351!2.19e-22!23;UBERON:0009113!2.19e-22!23;UBERON:0003295!2.19e-22!23;UBERON:0009722!2.19e-22!23;UBERON:0005562!2.19e-22!23;UBERON:0007690!2.19e-22!23;UBERON:0006562!3.52e-21!24;UBERON:0001557!3.52e-21!24;UBERON:0001042!3.52e-21!24;UBERON:0008814!3.52e-21!24;UBERON:0009145!3.52e-21!24;UBERON:0000072!4.14e-18!27;UBERON:0004177!4.40e-18!29;UBERON:0002390!4.55e-16!45;UBERON:0003061!4.55e-16!45;UBERON:0002193!1.45e-14!48;UBERON:0001004!6.44e-13!42;UBERON:0000063!1.52e-12!35;UBERON:0000065!5.05e-12!41;UBERON:0003081!7.23e-10!88;UBERON:0005057!1.56e-08!51;UBERON:0002405!1.91e-08!70 | |ontology_enrichment_uberon=UBERON:0003408!1.41e-23!24;UBERON:0002370!2.19e-22!23;UBERON:0000974!2.19e-22!23;UBERON:0004807!2.19e-22!23;UBERON:0005058!2.19e-22!23;UBERON:0003351!2.19e-22!23;UBERON:0009113!2.19e-22!23;UBERON:0003295!2.19e-22!23;UBERON:0009722!2.19e-22!23;UBERON:0005562!2.19e-22!23;UBERON:0007690!2.19e-22!23;UBERON:0006562!3.52e-21!24;UBERON:0001557!3.52e-21!24;UBERON:0001042!3.52e-21!24;UBERON:0008814!3.52e-21!24;UBERON:0009145!3.52e-21!24;UBERON:0000072!4.14e-18!27;UBERON:0004177!4.40e-18!29;UBERON:0002390!4.55e-16!45;UBERON:0003061!4.55e-16!45;UBERON:0002193!1.45e-14!48;UBERON:0001004!6.44e-13!42;UBERON:0000063!1.52e-12!35;UBERON:0000065!5.05e-12!41;UBERON:0003081!7.23e-10!88;UBERON:0005057!1.56e-08!51;UBERON:0002405!1.91e-08!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.85e-29,23;UBERON:0000974,5.85e-29,23;UBERON:0004807,5.85e-29,23;UBERON:0005058,5.85e-29,23;UBERON:0003351,5.85e-29,23;UBERON:0009113,5.85e-29,23;UBERON:0003295,5.85e-29,23;UBERON:0009722,5.85e-29,23;UBERON:0005562,5.85e-29,23;UBERON:0007690,5.85e-29,23;UBERON:0006562,1.10e-27,24;UBERON:0003408,1.10e-27,24;UBERON:0001557,1.10e-27,24;UBERON:0001042,1.10e-27,24;UBERON:0008814,1.10e-27,24;UBERON:0009145,1.10e-27,24;UBERON:0000072,2.00e-24,27;UBERON:0004177,1.26e-22,29;UBERON:0005057,1.26e-22,29;UBERON:0000077,1.86e-18,35;UBERON:0007811,6.77e-18,36;UBERON:0002390,1.31e-16,45;UBERON:0003061,1.31e-16,45;UBERON:0000065,1.67e-15,41;UBERON:0002193,1.87e-15,48;UBERON:0002405,1.87e-15,48;UBERON:0001004,4.31e-15,42;UBERON:0000153,1.06e-14,43;UBERON:0003929,4.17e-11,55;UBERON:0002368,4.97e-10,60;UBERON:0002530,4.05e-09,65;UBERON:0000490,5.93e-09,66;UBERON:0005911,1.74e-08,69;UBERON:0000949,4.70e-08,72;UBERON:0003081,1.22e-07,87;UBERON:0001041,4.58e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,5.29405626110463,0.703943610758334,0.936258105287974,0.34243593645101,0.159544317990673,1.54080656938085,2.44777126773193,0.999329285446988,0.202475267389826,0,0.788655413395594,0.685572168028694,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.18117387875057,1.45072428402269,1.68046899571232,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0.509935289981566,0.69975726161829,1.38199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,1.89606672376907,0.202725215290164,0.821687657318618,0.129920822977795,0.895133478337407,1.58945083825012,1.20195449519969,1.03382669022204,1.21159739937777,1.5241361331,1.10908803650525,1.16949456887703,2.40529604100824,3.27255326108393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,5.29405626110463,0.703943610758334,0.936258105287974,0.34243593645101,0.159544317990673,1.54080656938085,2.44777126773193,0.999329285446988,0.202475267389826,0,0.788655413395594,0.685572168028694,2.12194825899015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.18117387875057,1.45072428402269,1.68046899571232,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.381210681219194,0.149790639404823,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0.509935289981566,0.69975726161829,1.38199973804424,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,1.89606672376907,0.202725215290164,0.821687657318618,0.129920822977795,0.895133478337407,1.58945083825012,1.20195449519969,1.03382669022204,1.21159739937777,1.5241361331,1.10908803650525,1.16949456887703,2.40529604100824,3.27255326108393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr3:130722600..130722614,- | |short_description=p@chr3:130722600..130722614,- | ||
}} | }} |
Latest revision as of 01:01, 6 August 2015
Short description: | p@chr3:130722600..130722614, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:130722600..130722614, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.15e-15 | 12 |
mature alpha-beta T cell | 4.55e-14 | 9 |
alpha-beta T cell | 4.55e-14 | 9 |
immature T cell | 4.55e-14 | 9 |
mature T cell | 4.55e-14 | 9 |
immature alpha-beta T cell | 4.55e-14 | 9 |
lymphocyte | 9.33e-14 | 13 |
common lymphoid progenitor | 9.33e-14 | 13 |
T cell | 1.73e-11 | 11 |
pro-T cell | 1.73e-11 | 11 |
CD4-positive, alpha-beta T cell | 1.89e-10 | 8 |
leukocyte | 2.04e-10 | 17 |
nongranular leukocyte | 2.04e-10 | 17 |
hematopoietic lineage restricted progenitor cell | 2.50e-09 | 25 |
hematopoietic cell | 4.01e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.01e-07 | 32 |
hematopoietic stem cell | 4.01e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.01e-07 | 32 |