FFCP PHASE1:Mm9::chr13:113727762..113727768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |MCL_coexpression_id=81 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:113727762..113727768,+ | |||
|description=CAGE_peak_at_chr13:113727762..113727768,+ | |description=CAGE_peak_at_chr13:113727762..113727768,+ | ||
|id=chr13:113727762..113727768,+ | |id=chr13:113727762..113727768,+ | ||
|ontology_enrichment_celltype=CL:0000063!9.66e-13!66;CL:0000988!1.41e-11!32;CL:0002032!1.41e-11!32;CL:0000037!1.41e-11!32;CL:0000566!1.41e-11!32;CL:0000837!1.41e-11!32;CL:0002320!1.69e-10!46;CL:0000134!1.69e-10!46;CL:0000219!5.50e-10!54;CL:0002031!7.91e-10!25;CL:0000838!2.12e-09!12;CL:0000542!4.94e-09!13;CL:0000051!4.94e-09!13;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000548!9.06e-08!115;CL:0000004!9.06e-08!115;CL:0000255!9.06e-08!115;CL:0000738!9.89e-08!17;CL:0002087!9.89e-08!17;CL:0000791!1.14e-07!9;CL:0000789!1.14e-07!9;CL:0002420!1.14e-07!9;CL:0002419!1.14e-07!9;CL:0000790!1.14e-07!9;CL:0002371!6.40e-07!118;CL:0000624!6.48e-07!8;CL:0000144!6.49e-07!121;CL:0000012!6.49e-07!121 | |ontology_enrichment_celltype=CL:0000063!9.66e-13!66;CL:0000988!1.41e-11!32;CL:0002032!1.41e-11!32;CL:0000037!1.41e-11!32;CL:0000566!1.41e-11!32;CL:0000837!1.41e-11!32;CL:0002320!1.69e-10!46;CL:0000134!1.69e-10!46;CL:0000219!5.50e-10!54;CL:0002031!7.91e-10!25;CL:0000838!2.12e-09!12;CL:0000542!4.94e-09!13;CL:0000051!4.94e-09!13;CL:0000084!1.10e-08!11;CL:0000827!1.10e-08!11;CL:0000548!9.06e-08!115;CL:0000004!9.06e-08!115;CL:0000255!9.06e-08!115;CL:0000738!9.89e-08!17;CL:0002087!9.89e-08!17;CL:0000791!1.14e-07!9;CL:0000789!1.14e-07!9;CL:0002420!1.14e-07!9;CL:0002419!1.14e-07!9;CL:0000790!1.14e-07!9;CL:0002371!6.40e-07!118;CL:0000624!6.48e-07!8;CL:0000144!6.49e-07!121;CL:0000012!6.49e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.90e-34,25;CL:0000988,1.82e-32,32;CL:0002032,1.82e-32,32;CL:0000037,1.82e-32,32;CL:0000837,1.82e-32,32;CL:0000838,9.28e-31,12;CL:0000542,3.14e-28,13;CL:0000051,3.14e-28,13;CL:0000791,7.38e-28,9;CL:0000789,7.38e-28,9;CL:0002420,7.38e-28,9;CL:0002419,7.38e-28,9;CL:0000790,7.38e-28,9;CL:0000084,1.02e-27,11;CL:0000827,1.02e-27,11;CL:0002320,1.53e-26,46;CL:0000134,1.53e-26,46;CL:0000738,3.11e-25,17;CL:0002087,3.11e-25,17;CL:0000624,1.27e-24,8;CL:0000219,2.41e-24,54;CL:0000893,4.35e-19,6;CL:0002489,4.35e-19,6;CL:0000898,4.35e-19,6;CL:0000809,4.35e-19,6;CL:0000810,4.35e-19,6;CL:0000895,4.35e-19,6;CL:0000808,4.35e-19,6;CL:0000894,4.35e-19,6;CL:0000806,4.35e-19,6;CL:0000807,4.35e-19,6;CL:0000805,4.35e-19,6;CL:0002425,4.35e-19,6;CL:0002436,4.35e-19,6;CL:0002427,4.35e-19,6;CL:0002428,4.35e-19,6;CL:0002429,4.35e-19,6;CL:0002433,4.35e-19,6;CL:0002431,4.35e-19,6;CL:0002432,4.35e-19,6;CL:0000553,4.84e-13,6;CL:0000556,4.84e-13,6;CL:0000723,2.74e-11,91;CL:0000048,2.74e-11,91;CL:0000034,2.53e-10,97;CL:0000049,1.69e-09,19;CL:0000763,8.80e-09,16;CL:0000050,1.33e-08,9;CL:0000839,2.87e-08,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.69e-10!46;UBERON:0002193!2.61e-07!48;UBERON:0002390!5.94e-07!45;UBERON:0003061!5.94e-07!45;UBERON:0002405!5.99e-07!70 | |ontology_enrichment_uberon=UBERON:0002384!1.69e-10!46;UBERON:0002193!2.61e-07!48;UBERON:0002390!5.94e-07!45;UBERON:0003061!5.94e-07!45;UBERON:0002405!5.99e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.53e-26,46;UBERON:0002390,6.51e-13,45;UBERON:0003061,6.51e-13,45;UBERON:0002193,6.53e-12,48;UBERON:0002405,6.53e-12,48;UBERON:0000072,4.89e-10,27;UBERON:0002371,8.80e-09,16;UBERON:0002370,8.06e-08,23;UBERON:0000974,8.06e-08,23;UBERON:0004807,8.06e-08,23;UBERON:0005058,8.06e-08,23;UBERON:0003351,8.06e-08,23;UBERON:0009113,8.06e-08,23;UBERON:0003295,8.06e-08,23;UBERON:0009722,8.06e-08,23;UBERON:0005562,8.06e-08,23;UBERON:0007690,8.06e-08,23;UBERON:0006562,1.92e-07,24;UBERON:0003408,1.92e-07,24;UBERON:0001557,1.92e-07,24;UBERON:0001042,1.92e-07,24;UBERON:0008814,1.92e-07,24;UBERON:0009145,1.92e-07,24 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0,0.16787927191189,1.40167584357315,1.93684985162364,4.36445038670167,2.80877431586392,2.39705155515707,1.11681022593471,2.9104124088305,1.83582845079895,0.333109761815663,1.21485160433896,1.39912375625629,3.78554598429885,1.91960207048034,2.97072756258621,0.255129870453209,0.595745707205312,1.82839852397255,0.95995453676044,0.68822784320151,0,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.506884656097573,0.550640256485045,1.56478268869608,0,0,0,0.55994568650145,0,2.51673909086605,1.45072428402269,4.36921938885203,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.630974884054146,0.285650984403804,0,0.367472397644862,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.757261933331841,0.604572480854284,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,1.55871602761721,0.70667914902068,0.14084341977668,1.28326477414318,0,7.11066703153331,1.08245520505607,0.253359865475099,2.02209778005913,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,2.39961092397363,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.61734640922383,0,1.40442637462647,0.772043721344145,0.284163499395593,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.804820204198858,0.233530684734339,0,0.32833492815819,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0,0,0.358794827043824,0.482443521363367,0,0,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,2.17562273527484,0,0,0,0,0.983609672260053,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0.754420319023592,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.619160603889667,0.185194527369712,0,0.546776910884101,0.915112692826091,0.679913719975421,0,0.138199973804424,0,0.158167996790568,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.58678619322877,0,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0,0,0.481059208201647,0.233753804363138,0.226730383615211,0.887943813496259,0.538283139656854,0.503653849092235,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.441596760403192,1.02860775715625,0.354951612318675,0,0.145346416632329,0,0,0.548783918618318,0.263069711437843,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0 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|phase1_expression=0.480446541314382,0,0.454999239389536,0.30246421130683,0,0.16787927191189,1.40167584357315,1.93684985162364,4.36445038670167,2.80877431586392,2.39705155515707,1.11681022593471,2.9104124088305,1.83582845079895,0.333109761815663,1.21485160433896,1.39912375625629,3.78554598429885,1.91960207048034,2.97072756258621,0.255129870453209,0.595745707205312,1.82839852397255,0.95995453676044,0.68822784320151,0,0.430761996159075,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.506884656097573,0.550640256485045,1.56478268869608,0,0,0,0.55994568650145,0,2.51673909086605,1.45072428402269,4.36921938885203,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.630974884054146,0.285650984403804,0,0.367472397644862,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.757261933331841,0.604572480854284,0.869593466105033,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0.170430322578058,1.55871602761721,0.70667914902068,0.14084341977668,1.28326477414318,0,7.11066703153331,1.08245520505607,0.253359865475099,2.02209778005913,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,2.39961092397363,0.254140454146129,0,0,0.125654352112864,0,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.61734640922383,0,1.40442637462647,0.772043721344145,0.284163499395593,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0.804820204198858,0.233530684734339,0,0.32833492815819,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0,0,0.358794827043824,0.482443521363367,0,0,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0.491589944147214,0,0.144649058581512,0,2.17562273527484,0,0,0,0,0.983609672260053,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0.754420319023592,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.341741761595705,0.619160603889667,0.185194527369712,0,0.546776910884101,0.915112692826091,0.679913719975421,0,0.138199973804424,0,0.158167996790568,0,0,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.58678619322877,0,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0,0,0.481059208201647,0.233753804363138,0.226730383615211,0.887943813496259,0.538283139656854,0.503653849092235,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.441596760403192,1.02860775715625,0.354951612318675,0,0.145346416632329,0,0,0.548783918618318,0.263069711437843,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr13:113727762..113727768,+ | |short_description=p@chr13:113727762..113727768,+ | ||
}} | }} |
Latest revision as of 15:07, 5 August 2015
Short description: | p@chr13:113727762..113727768, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113727762..113727768, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.53e-26 | 46 |
hematopoietic system | 6.51e-13 | 45 |
blood island | 6.51e-13 | 45 |
hemolymphoid system | 6.53e-12 | 48 |
immune system | 6.53e-12 | 48 |
segment of respiratory tract | 4.89e-10 | 27 |
bone marrow | 8.80e-09 | 16 |
thymus | 8.06e-08 | 23 |
neck | 8.06e-08 | 23 |
respiratory system epithelium | 8.06e-08 | 23 |
hemolymphoid system gland | 8.06e-08 | 23 |
pharyngeal epithelium | 8.06e-08 | 23 |
thymic region | 8.06e-08 | 23 |
pharyngeal gland | 8.06e-08 | 23 |
entire pharyngeal arch endoderm | 8.06e-08 | 23 |
thymus primordium | 8.06e-08 | 23 |
early pharyngeal endoderm | 8.06e-08 | 23 |
pharynx | 1.92e-07 | 24 |
gland of gut | 1.92e-07 | 24 |
upper respiratory tract | 1.92e-07 | 24 |
chordate pharynx | 1.92e-07 | 24 |
pharyngeal arch system | 1.92e-07 | 24 |
pharyngeal region of foregut | 1.92e-07 | 24 |