FFCP PHASE1:Hg19::chr2:30144229..30144240,-: Difference between revisions
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|id=chr2:30144229..30144240,-
|short_description=p10@ALK
|description=CAGE_peak_10_at_ALK_5end
|association_with_transcript=191bp_to_ENST00000389048,uc002rmy.2_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=238 | |EntrezGene=238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=427 | |HGNC=427 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UM73 | |UniProt=Q9UM73 | ||
|association_with_transcript=191bp_to_ENST00000389048,uc002rmy.2_5end | |||
|cluster_id=chr2:30144229..30144240,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_10_at_ALK_5end | |||
|id=chr2:30144229..30144240,- | |||
|ontology_enrichment_celltype=CL:0000133!1.66e-07!59;CL:0002605!2.32e-07!3;CL:0000333!4.57e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease=DOID:169!4.01e-13!6;DOID:171!3.03e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000941!1.08e-19!1;UBERON:0004904!1.08e-19!1;UBERON:0002464!1.08e-19!1;UBERON:0001021!1.08e-19!1;UBERON:0001785!1.08e-19!1;UBERON:0002581!5.62e-19!1;UBERON:0000010!6.80e-19!8;UBERON:0000073!5.79e-18!94;UBERON:0001016!5.79e-18!94;UBERON:0000013!1.51e-15!5;UBERON:0002410!1.51e-15!5;UBERON:0003714!1.57e-10!2;UBERON:0005162!1.57e-10!2;UBERON:0000122!1.57e-10!2;UBERON:0000007!1.72e-10!2;UBERON:0001876!2.99e-10!2;UBERON:0001017!3.66e-10!82;UBERON:0004121!7.64e-10!169;UBERON:0005743!1.10e-09!86;UBERON:0000924!1.33e-09!173;UBERON:0006601!1.33e-09!173;UBERON:0000955!5.92e-09!69;UBERON:0006238!5.92e-09!69;UBERON:0003056!2.56e-07!61;UBERON:0002780!3.53e-07!41;UBERON:0001890!3.53e-07!41;UBERON:0006240!3.53e-07!41;UBERON:0003080!5.12e-07!42;UBERON:0000956!8.37e-07!25;UBERON:0000203!8.37e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;9.75e-45;8!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0000010,9.75e-45,8;UBERON:0001781,7.14e-26,4;UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p10@ALK | |||
}} | }} |
Latest revision as of 21:36, 16 September 2015
Short description: | p10@ALK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ALK_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 191bp_to_ENST00000389048, uc002rmy.2_5end |
EntrezGene: | ALK |
HGNC: | 427 |
UniProt: | Q9UM73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
peripheral nervous system | 9.75e-45 | 8 |
layer of retina | 7.14e-26 | 4 |
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |