FFCP PHASE1:Hg19::chr2:36744609..36744652,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:36744609..36744652,+
|short_description=p4@CRIM1
|description=CAGE_peak_4_at_CRIM1_5end
|association_with_transcript=93bp_to_AK300817_5end
|EntrezGene=512...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51232 | |EntrezGene=51232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2359 | |HGNC=2359 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUW0 | |UniProt=B4DUW0 | ||
|association_with_transcript=93bp_to_AK300817_5end | |||
|cluster_id=chr2:36744609..36744652,+ | |||
|coexpression_cluster_id=C2699 | |||
|description=CAGE_peak_4_at_CRIM1_5end | |||
|id=chr2:36744609..36744652,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.99e-14!119;CL:0000055!2.25e-12!180;CL:0000057!8.33e-11!75;CL:0000213!2.08e-10!57;CL:0000215!2.08e-10!57;CL:0000220!6.18e-08!246;CL:0002321!1.37e-07!248;CL:0002139!1.68e-07!24;CL:0002620!1.92e-07!23;CL:0000192!3.68e-07!42;CL:0000514!3.68e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002138;5.52e-09;6!CL:0002595;7.46e-09;5!CL:0000213;1.27e-08;58!CL:0000215;1.27e-08;58!CL:0000115;2.67e-08;36!CL:0002139;3.59e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.86e-15,58;CL:0000215,2.86e-15,58;CL:0000222,6.87e-13,121;CL:0000057,9.44e-11,76;CL:0002595,6.42e-09,5;CL:0005020,7.00e-09,6;CL:0002138,7.00e-09,6;CL:0005022,7.00e-09,6;CL:0000115,7.42e-09,36;CL:0002078,3.46e-08,45;CL:0002139,2.34e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;5.52e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.81e-08;5!DOID:450;1.81e-08;5!DOID:66;1.81e-08;5!DOID:423;1.81e-08;5!DOID:0080000;1.81e-08;5!DOID:11722;1.81e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.45e-08,5;DOID:450,2.45e-08,5;DOID:66,2.45e-08,5;DOID:423,2.45e-08,5;DOID:0080000,2.45e-08,5;DOID:11722,2.45e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.28e-14!69;UBERON:0002049!1.14e-13!79;UBERON:0007798!1.14e-13!79;UBERON:0001981!7.48e-12!60;UBERON:0007500!7.48e-12!60;UBERON:0004537!7.48e-12!60;UBERON:0006965!7.48e-12!60;UBERON:0004872!3.34e-11!84;UBERON:0000477!1.72e-10!286;UBERON:0001637!3.45e-10!42;UBERON:0003509!3.45e-10!42;UBERON:0004572!3.45e-10!42;UBERON:0000468!5.73e-10!659;UBERON:0000467!1.55e-09!625;UBERON:0000490!2.18e-09!138;UBERON:0000480!2.22e-09!626;UBERON:0000475!6.25e-08!365;UBERON:0001009!6.60e-08!113;UBERON:0000483!1.20e-07!309;UBERON:0000119!1.24e-07!312;UBERON:0003914!1.25e-07!118;UBERON:0004535!1.46e-07!110;UBERON:0005256!1.46e-07!143;UBERON:0002100!2.76e-07!216;UBERON:0004111!3.41e-07!241;UBERON:0000481!3.46e-07!347;UBERON:0004573!4.26e-07!33;UBERON:0004571!4.26e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.53e-10;42!UBERON:0003509;4.53e-10;42!UBERON:0004572;4.53e-10;42!UBERON:0003834;7.46e-09;5!UBERON:0001533;7.46e-09;5!UBERON:0004573;1.85e-08;33!UBERON:0004571;1.85e-08;33!UBERON:0003513;1.95e-08;7!UBERON:0004457;2.56e-08;9!UBERON:0000042;2.56e-08;9!UBERON:0005631;4.65e-08;10!UBERON:0000158;4.65e-08;10!UBERON:0003688;6.82e-07;6!UBERON:0002358;6.82e-07;6!UBERON:0003684;6.82e-07;6!UBERON:0001178;6.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.74e-12,68;UBERON:0001637,1.98e-12,42;UBERON:0003509,1.98e-12,42;UBERON:0004572,1.98e-12,42;UBERON:0002049,1.65e-11,78;UBERON:0007798,1.65e-11,78;UBERON:0004573,2.89e-09,33;UBERON:0004571,2.89e-09,33;UBERON:0007500,5.08e-09,59;UBERON:0001981,5.08e-09,59;UBERON:0004537,5.08e-09,59;UBERON:0006965,5.08e-09,59;UBERON:0003834,6.42e-09,5;UBERON:0001533,6.42e-09,5;UBERON:0004872,7.88e-09,83;UBERON:0005631,1.51e-08,14;UBERON:0000158,1.51e-08,14;UBERON:0003513,1.63e-08,7;UBERON:0004535,8.67e-08,109;UBERON:0001009,2.32e-07,112 | |||
|phase1_expression=1.09007027562334,4.28201047781966,1.12763523276777,5.00366491765652,1.34088328328186,6.97870819280295,0,0,0,0,0,0.218441372130172,0,0.247532705920093,0.331397375727916,2.01697543935533,1.80808358407193,2.19093027116212,1.46379839637152,0,0.816002764977012,0,0.286235987131057,0,0.753255837568817,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,3.62116297402059,0,1.45990461090791,0.283604451492204,1.10864698731282,0.87834785693126,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,1.69592382577203,3.35599548967925,3.57653454522088,1.46296476575767,1.03366703667732,1.42306505074684,1.33888245105868,0.402829317109147,0.760272105718513,1.95249646038536,0,3.24056779152704,0.714397826272638,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,1.49091585508596,1.39293562831038,0.264818361626438,1.43418310374407,0.709336764396714,1.12135520028461,0,1.97334038733728,0,1.0776853765575,0.653847612453835,0,0,0.70296429550139,0.312160076830321,0,0.747243402759005,0,0.485618833104395,0.421352420106746,0,0.737005903870608,0,0,1.97813543422845,0,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,0,3.37136575378922,0.751190294532984,1.24775401476023,3.04962380671065,1.2813443329114,1.27159140695737,4.20127534518163,1.44273540933814,3.09168648054755,0.930584281657949,0.168776332241266,1.07180705677318,2.27190396819703,0.460249493211497,0.484938170456436,7.10019185033229,1.41052937518696,1.3564847384839,0.386521706326594,0,0,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,2.16563844500876,0.354920400119532,0.674338760312407,0.964044119533928,0.661763836394364,0.871517776369625,0.474541238222193,0.674156540800822,0.588664395376038,1.15424147083917,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0.368965315629341,1.02940686179115,0.439001141634502,0,0.603173834469785,0.462942225792648,0,0,2.88662684050547,0.463721619900307,0.234817388471643,1.15493158208859,2.77791307545966,1.90254152234598,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.2933531432838,0,0,1.690605505112,2.92531928243358,4.16029747645464,0.257207374262142,0,0.532844358032199,1.28680194292333,0,0,0,0,0,1.80863626235752,0,0.99972991182057,0,0,0,0.958499421966331,0,0,0.868687840005475,1.2328579353023,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,1.87173775377726,8.20773348466944,2.52323864054295,1.28855556491985,0,0,1.03473071292505,1.99267679560631,0,1.04260337361699,0,0,0,0,0,0.606255142892519,0,1.5119514666484,0.992431231275107,0.920771839728375,4.77122160536225,0.896974044789907,1.02341449813341,2.2519548960105,1.48418066444991,1.54209693802656,0.887808626565635,0,0.519254429183621,1.16210378459959,0.604297247958111,1.20303882181971,0.368323955743585,0.574072240823034,0.910455840033585,0.786746489756545,0,0.924184045252977,0,0,0.316654886678627,2.27466768141793,1.19065593693561,1.0795795805107,3.08454505380579,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,1.30151357865721,0.9273691048295,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0.870100163485371,0.340906509664404,0.178064071293475,0.330569830721956,0.192190067365106,0.127612712494584,0.30347334256665,0.929691098594572,5.03699754929024,0,0.616067160352178,0,0,0,0.286249773483982,0,0.632758849437452,0.953150969619124,0,0,0,0,0.539617372749944,1.64722217841633,0.706874414074119,0.808729926293264,1.58510321173008,0,0.48763373908959,4.38684281336312,2.11300293513511,0.545999645631943,0.424216295861138,3.39024349860728,1.65409603063837,3.3171948762061,1.31535265576129,0.578775534266688,0.655894752046633,0.202910376962704,0.92947049429925,0.281695602532241,0.860468113224309,0.785992328104969,0.35667105148125,0,2.32218398827431,1.31717957183961,0,0,0,0,0,1.60044461320525,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0.568272293612826,1.19372242368845,0.593929361665277,3.07160702099232,1.9882952955326,0,0.222617410045812,0,0,1.39473591775749,0,0,0.102268682502155,0,2.79935628895627,0,0.358042349351218,0,0.197286811273867,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0.653630781113941,0.278847488557207,0.230850775511391,0.569710279235006,0,0.359030577639089,0.325942115766024,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| ||
|short_description=p4@CRIM1 | |||
}} | }} |
Latest revision as of 01:08, 17 September 2015
Short description: | p4@CRIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CRIM1_5end |
Coexpression cluster: | C2699_Olfactory_Fibroblast_Endothelial_chorionic_Adipocyte_Chondrocyte_Smooth |
Association with transcript: | 93bp_to_AK300817_5end |
EntrezGene: | CRIM1 |
HGNC: | 2359 |
UniProt: | B4DUW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.86e-15 | 58 |
barrier cell | 2.86e-15 | 58 |
mesodermal cell | 6.87e-13 | 121 |
fibroblast | 9.44e-11 | 76 |
smooth muscle cell of the subclavian artery | 6.42e-09 | 5 |
lymphangioblast | 7.00e-09 | 6 |
endothelial cell of lymphatic vessel | 7.00e-09 | 6 |
vascular lymphangioblast | 7.00e-09 | 6 |
endothelial cell | 7.42e-09 | 36 |
meso-epithelial cell | 3.46e-08 | 45 |
endothelial cell of vascular tree | 2.34e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.74e-12 | 68 |
artery | 1.98e-12 | 42 |
arterial blood vessel | 1.98e-12 | 42 |
arterial system | 1.98e-12 | 42 |
vasculature | 1.65e-11 | 78 |
vascular system | 1.65e-11 | 78 |
systemic artery | 2.89e-09 | 33 |
systemic arterial system | 2.89e-09 | 33 |
epithelial tube open at both ends | 5.08e-09 | 59 |
blood vessel | 5.08e-09 | 59 |
blood vasculature | 5.08e-09 | 59 |
vascular cord | 5.08e-09 | 59 |
thoracic segment blood vessel | 6.42e-09 | 5 |
subclavian artery | 6.42e-09 | 5 |
splanchnic layer of lateral plate mesoderm | 7.88e-09 | 83 |
extraembryonic membrane | 1.51e-08 | 14 |
membranous layer | 1.51e-08 | 14 |
trunk blood vessel | 1.63e-08 | 7 |
cardiovascular system | 8.67e-08 | 109 |
circulatory system | 2.32e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.45e-08 | 5 |
myotonic disease | 2.45e-08 | 5 |
muscle tissue disease | 2.45e-08 | 5 |
myopathy | 2.45e-08 | 5 |
muscular disease | 2.45e-08 | 5 |
myotonic dystrophy | 2.45e-08 | 5 |