FFCP PHASE1:Hg19::chr2:37571765..37571779,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:37571765..37571779,+
|short_description=p3@QPCT
|description=CAGE_peak_3_at_QPCT_5end
|association_with_transcript=12bp_to_NM_012413,uc002rqg.2,uc002rqh.2_...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25797 | |EntrezGene=25797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9753 | |HGNC=9753 | ||
|TSSclassifier=strong | |||
|UniProt=Q16769,Q53TR4 | |UniProt=Q16769,Q53TR4 | ||
|association_with_transcript=12bp_to_NM_012413,uc002rqg.2,uc002rqh.2_5end | |||
|cluster_id=chr2:37571765..37571779,+ | |||
|coexpression_cluster_id=C1903 | |||
|description=CAGE_peak_3_at_QPCT_5end | |||
|id=chr2:37571765..37571779,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.11e-16!76;CL:0002057!1.14e-15!42;CL:0002194!3.17e-13!63;CL:0000576!3.17e-13!63;CL:0000040!3.17e-13!63;CL:0000559!3.17e-13!63;CL:0000860!4.31e-13!45;CL:0002009!5.11e-13!65;CL:0000557!1.89e-11!71;CL:0000839!4.57e-11!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-21;33!CL:0002057;1.27e-21;33!CL:0000473;6.72e-20;39!CL:0000234;6.72e-20;39!CL:0000576;9.82e-11;48!CL:0000766;1.82e-09;69!CL:0000094;3.93e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.83e-23,48;CL:0000234,5.83e-23,48;CL:0000766,8.39e-23,72;CL:0000860,6.24e-21,42;CL:0002057,6.24e-21,42;CL:0002194,5.81e-20,59;CL:0000576,5.81e-20,59;CL:0000040,5.81e-20,59;CL:0000559,5.81e-20,59;CL:0002009,6.81e-20,61;CL:0000557,3.60e-17,67;CL:0000839,1.25e-16,66;CL:0000763,1.20e-09,108;CL:0000049,1.20e-09,108;CL:0000048,2.96e-09,427;CL:0000034,7.43e-09,441;CL:0000723,7.80e-09,433;CL:0000094,3.53e-07,8;CL:0000134,4.59e-07,354;CL:0000219,4.98e-07,386;CL:0000359,6.27e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-15;42 | |||
|ontology_enrichment_disease=DOID:2394!7.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.52e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.64e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.04e-13!216;UBERON:0000467!4.71e-12!625;UBERON:0000480!7.95e-12!626;UBERON:0002204!8.20e-11!167;UBERON:0001474!2.96e-10!86;UBERON:0000926!4.12e-10!448;UBERON:0004120!4.12e-10!448;UBERON:0006603!4.12e-10!448;UBERON:0002390!4.86e-10!102;UBERON:0003061!4.86e-10!102;UBERON:0000468!6.71e-10!659;UBERON:0002371!1.12e-09!80;UBERON:0004765!1.96e-09!101;UBERON:0001434!1.96e-09!101;UBERON:0002193!3.93e-09!112;UBERON:0000922!9.34e-08!612;UBERON:0002050!1.00e-07!605;UBERON:0005423!1.00e-07!605;UBERON:0000923!1.47e-07!604;UBERON:0005291!1.47e-07!604;UBERON:0006598!1.47e-07!604;UBERON:0002532!1.47e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.80e-18,203;UBERON:0001474,5.02e-17,82;UBERON:0002371,8.34e-16,76;UBERON:0002390,2.39e-15,98;UBERON:0003061,2.39e-15,98;UBERON:0004765,8.15e-15,90;UBERON:0002193,1.22e-13,108;UBERON:0000926,1.26e-13,315;UBERON:0004120,1.26e-13,315;UBERON:0006603,1.26e-13,315;UBERON:0001434,1.60e-12,100;UBERON:0002204,1.97e-12,167;UBERON:0002405,1.14e-11,93 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.704772020479856,4.00293193412522,1.78784437770915,0.872338524100369,0,3.79031924056099,0.522371256399677,0.491467873003018,0,2.40285509343189,1.05506791291381,0,0.331397375727916,2.6893005858071,4.82155622419182,3.65155045193687,2.92759679274304,0.984968464614303,0.816002764977012,0,0.572471974262113,0.136874425072884,0.627713197974014,0,0,0,3.54027849164014,3.83829398097213,5.72819656269481,0,0.30120591877825,0,0,0,0,6.09394949385065,1.60435557976113,3.68918480216948,0.671746422719773,0.32389366601898,0,8.72389432677388,8.31327076115381,9.70336244751265,9.29716147622739,9.86802931252382,10.8397229813286,4.60307827715441,5.89169625016932,3.78371567821736,8.27389633767885,4.51839278508678,2.70852973188684,11.2945403725563,14.4640259530658,15.5059204267108,14.3859429414324,18.6138835704134,9.59005688698562,5.27762080298746,6.38283704389222,4.68847225585964,13.6398342155434,23.8301794370279,21.7987787148451,5.02497330513487,9.90817544998383,4.34377689410233,10.2917915447673,19.5187147073409,15.1901945971625,0.211255286311942,1.06302149982522,1.25795187305026,4.4931452458598,5.10601435661121,4.98249318760948,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,3.96513985737078,6.1655941927969,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0,0,0.301150238155546,0.383959833463255,0,1.18388626022008,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0,0.434539556882471,3.9764297352555,0,0.189069634328136,0,0.87834785693126,0.261958150995425,0,0.370784442784429,41.8666137814541,33.9552987733571,53.4491001285838,0.715471872916026,0,0,2.58391129576717,3.4409383804245,2.08284300964557,0,2.51699661725944,4.67700671298115,3.13492449805216,2.32575083252396,1.06729878806013,3.01248551488203,0,0,0.24406205754817,1.47065232138347,0.81014194788176,3.39338967479503,4.26605807989723,2.25222960966644,1.53316637465883,0.949265659568129,2.38162267109529,13.1780417436063,19.3890132074163,0,0,0.506522046658319,0.397227542439656,0,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,1.0776853765575,0.490385709340376,0.454072282934794,1.15235184896,0,2.80944069147288,2.2818872861778,1.49448680551801,0,0,0,0,0,0.309977343527296,0,1.23633464639278,0,0,0,0.125118519871964,0.554128230968366,0,0.919463387397059,2.85452311922534,0.453728732640084,1.61450672119976,3.20336083227851,2.54318281391474,8.10245959427886,3.81294358182224,0.772921620136887,4.09457083929498,2.70042131586026,1.55899208257918,1.51460264546469,2.94559675655358,0.161646056818812,18.1054892183473,8.56392834934942,0.508681776931463,3.67195621010264,2.18196896472668,1.14721838155602,0,0,0.464775771478074,0.621966330092223,1.00928340350251,0,3.12899064659632,7.71889125831462,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,3.54473944008842,0,0.245976877086227,1.88724591328378,0.439001141634502,2.24803506515239,0.402115889646523,0.185176890317059,0,1.03993478527958,4.3299402607582,0.231860809950154,4.10930429825376,0.288732895522148,0,0,0,0,2.46217006087397,29.0165288772655,15.6062720403165,0.93733833986777,1.00789276919316,1.70130116690864,0,0.290633938513962,0,1.47798971368783,0,0.207328115540772,0.720599767084807,0.12624243342638,120.963488626582,59.5901943870913,72.6748172702291,17.1072446022705,48.637404048672,159.48216371512,108.328217966989,0.336393253036082,2.1798003441664,0.5867062865676,7.36848779819333,0,0,1.59562869950922,2.08014873822732,0,0,0,0,2.17048642156577,0,0.325736184293735,0,0.791951872933429,8.44030255766841,3.48613383440118,5.29856853264902,4.86495122564762,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.821905290201534,0.179060963239896,0,0.394061520403854,0.215627574859517,0.641715181398742,2.03275699377971,1.30139853857622,0,0.502548796003046,0,21.7212036944683,17.9496875522415,25.2793463195982,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,3.61135319673263,4.5481500811197,1.03473071292505,1.32845119707087,1.47495334833363,2.78027566297865,0,0.343143423810856,1.24060815673732,0.647142602455851,0.960548020230999,0,9.98612637062982,1.5119514666484,0.248107807818777,1.53461973288062,1.12264037773229,0.896974044789907,0.511707249066704,2.41280881715411,2.96836132889982,8.78995254675137,15.9805552781814,10.5944031257814,15.058378446325,8.25093687065711,0.120859449591622,0.200506470303285,0.552485933615378,0.574072240823034,0.182091168006717,0.786746489756545,0,0.770153371044148,0.784349769176855,0,0.844413031143006,0,1.70093705276516,1.51141141271498,1.54227252690289,0.270946437543853,0,1.78413391131527,0.831076008928724,0.895499018888713,0,0,0,0.984043937099117,0.325378394664303,0.824328093181778,26.7382837269563,29.4558914716499,1.14853107599234,1.95018073810956,0,0.193341436584244,0,0,0,0,0.145016693914229,0.681813019328807,0.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|phase1_expression=0.363356758541113,1.07050261945492,0.704772020479856,4.00293193412522,1.78784437770915,0.872338524100369,0,3.79031924056099,0.522371256399677,0.491467873003018,0,2.40285509343189,1.05506791291381,0,0.331397375727916,2.6893005858071,4.82155622419182,3.65155045193687,2.92759679274304,0.984968464614303,0.816002764977012,0,0.572471974262113,0.136874425072884,0.627713197974014,0,0,0,3.54027849164014,3.83829398097213,5.72819656269481,0,0.30120591877825,0,0,0,0,6.09394949385065,1.60435557976113,3.68918480216948,0.671746422719773,0.32389366601898,0,8.72389432677388,8.31327076115381,9.70336244751265,9.29716147622739,9.86802931252382,10.8397229813286,4.60307827715441,5.89169625016932,3.78371567821736,8.27389633767885,4.51839278508678,2.70852973188684,11.2945403725563,14.4640259530658,15.5059204267108,14.3859429414324,18.6138835704134,9.59005688698562,5.27762080298746,6.38283704389222,4.68847225585964,13.6398342155434,23.8301794370279,21.7987787148451,5.02497330513487,9.90817544998383,4.34377689410233,10.2917915447673,19.5187147073409,15.1901945971625,0.211255286311942,1.06302149982522,1.25795187305026,4.4931452458598,5.10601435661121,4.98249318760948,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,3.96513985737078,6.1655941927969,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0,0,0.301150238155546,0.383959833463255,0,1.18388626022008,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0,0.434539556882471,3.9764297352555,0,0.189069634328136,0,0.87834785693126,0.261958150995425,0,0.370784442784429,41.8666137814541,33.9552987733571,53.4491001285838,0.715471872916026,0,0,2.58391129576717,3.4409383804245,2.08284300964557,0,2.51699661725944,4.67700671298115,3.13492449805216,2.32575083252396,1.06729878806013,3.01248551488203,0,0,0.24406205754817,1.47065232138347,0.81014194788176,3.39338967479503,4.26605807989723,2.25222960966644,1.53316637465883,0.949265659568129,2.38162267109529,13.1780417436063,19.3890132074163,0,0,0.506522046658319,0.397227542439656,0,0.354668382198357,0.560677600142307,1.06748995729705,0.74000264525148,0,1.0776853765575,0.490385709340376,0.454072282934794,1.15235184896,0,2.80944069147288,2.2818872861778,1.49448680551801,0,0,0,0,0,0.309977343527296,0,1.23633464639278,0,0,0,0.125118519871964,0.554128230968366,0,0.919463387397059,2.85452311922534,0.453728732640084,1.61450672119976,3.20336083227851,2.54318281391474,8.10245959427886,3.81294358182224,0.772921620136887,4.09457083929498,2.70042131586026,1.55899208257918,1.51460264546469,2.94559675655358,0.161646056818812,18.1054892183473,8.56392834934942,0.508681776931463,3.67195621010264,2.18196896472668,1.14721838155602,0,0,0.464775771478074,0.621966330092223,1.00928340350251,0,3.12899064659632,7.71889125831462,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,3.54473944008842,0,0.245976877086227,1.88724591328378,0.439001141634502,2.24803506515239,0.402115889646523,0.185176890317059,0,1.03993478527958,4.3299402607582,0.231860809950154,4.10930429825376,0.288732895522148,0,0,0,0,2.46217006087397,29.0165288772655,15.6062720403165,0.93733833986777,1.00789276919316,1.70130116690864,0,0.290633938513962,0,1.47798971368783,0,0.207328115540772,0.720599767084807,0.12624243342638,120.963488626582,59.5901943870913,72.6748172702291,17.1072446022705,48.637404048672,159.48216371512,108.328217966989,0.336393253036082,2.1798003441664,0.5867062865676,7.36848779819333,0,0,1.59562869950922,2.08014873822732,0,0,0,0,2.17048642156577,0,0.325736184293735,0,0.791951872933429,8.44030255766841,3.48613383440118,5.29856853264902,4.86495122564762,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.821905290201534,0.179060963239896,0,0.394061520403854,0.215627574859517,0.641715181398742,2.03275699377971,1.30139853857622,0,0.502548796003046,0,21.7212036944683,17.9496875522415,25.2793463195982,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,3.61135319673263,4.5481500811197,1.03473071292505,1.32845119707087,1.47495334833363,2.78027566297865,0,0.343143423810856,1.24060815673732,0.647142602455851,0.960548020230999,0,9.98612637062982,1.5119514666484,0.248107807818777,1.53461973288062,1.12264037773229,0.896974044789907,0.511707249066704,2.41280881715411,2.96836132889982,8.78995254675137,15.9805552781814,10.5944031257814,15.058378446325,8.25093687065711,0.120859449591622,0.200506470303285,0.552485933615378,0.574072240823034,0.182091168006717,0.786746489756545,0,0.770153371044148,0.784349769176855,0,0.844413031143006,0,1.70093705276516,1.51141141271498,1.54227252690289,0.270946437543853,0,1.78413391131527,0.831076008928724,0.895499018888713,0,0,0,0.984043937099117,0.325378394664303,0.824328093181778,26.7382837269563,29.4558914716499,1.14853107599234,1.95018073810956,0,0.193341436584244,0,0,0,0,0.145016693914229,0.681813019328807,0.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| ||
|short_description=p3@QPCT | |||
}} | }} |
Latest revision as of 02:14, 17 September 2015
Short description: | p3@QPCT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_QPCT_5end |
Coexpression cluster: | C1903_Neutrophils_Melanocyte_melanoma_large_Eosinophils_Dendritic_smallcell |
Association with transcript: | 12bp_to_NM_012413, uc002rqg.2, uc002rqh.2_5end |
EntrezGene: | QPCT |
HGNC: | 9753 |
UniProt: | Q16769Q53TR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.83e-23 | 48 |
phagocyte | 5.83e-23 | 48 |
myeloid leukocyte | 8.39e-23 | 72 |
classical monocyte | 6.24e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.24e-21 | 42 |
monopoietic cell | 5.81e-20 | 59 |
monocyte | 5.81e-20 | 59 |
monoblast | 5.81e-20 | 59 |
promonocyte | 5.81e-20 | 59 |
macrophage dendritic cell progenitor | 6.81e-20 | 61 |
granulocyte monocyte progenitor cell | 3.60e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.25e-16 | 66 |
myeloid cell | 1.20e-09 | 108 |
common myeloid progenitor | 1.20e-09 | 108 |
multi fate stem cell | 2.96e-09 | 427 |
stem cell | 7.43e-09 | 441 |
somatic stem cell | 7.80e-09 | 433 |
granulocyte | 3.53e-07 | 8 |
mesenchymal cell | 4.59e-07 | 354 |
motile cell | 4.98e-07 | 386 |
vascular associated smooth muscle cell | 6.27e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.80e-18 | 203 |
bone element | 5.02e-17 | 82 |
bone marrow | 8.34e-16 | 76 |
hematopoietic system | 2.39e-15 | 98 |
blood island | 2.39e-15 | 98 |
skeletal element | 8.15e-15 | 90 |
hemolymphoid system | 1.22e-13 | 108 |
mesoderm | 1.26e-13 | 315 |
mesoderm-derived structure | 1.26e-13 | 315 |
presumptive mesoderm | 1.26e-13 | 315 |
skeletal system | 1.60e-12 | 100 |
musculoskeletal system | 1.97e-12 | 167 |
immune system | 1.14e-11 | 93 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.64e-08 | 14 |