FFCP PHASE1:Hg19::chr2:65455489..65455504,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:65455489..65455504,-
|short_description=p4@LOC729324
|description=CAGE_peak_4_at_LOC729324_5end
|association_with_transcript=-410bp_to_BC041895_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729324 | |EntrezGene=729324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-410bp_to_BC041895_5end | |||
|cluster_id=chr2:65455489..65455504,- | |||
|coexpression_cluster_id=C1010 | |||
|description=CAGE_peak_4_at_LOC729324_5end | |||
|id=chr2:65455489..65455504,- | |||
|ontology_enrichment_celltype=CL:0000738!3.26e-76!140;CL:0000037!6.65e-66!172;CL:0000566!6.65e-66!172;CL:0002031!2.90e-63!124;CL:0002087!1.58e-62!119;CL:0000988!8.76e-62!182;CL:0002032!4.15e-60!165;CL:0000837!4.15e-60!165;CL:0002057!2.42e-49!42;CL:0000860!5.88e-47!45;CL:0000766!1.77e-42!76;CL:0000557!6.38e-38!71;CL:0002009!2.06e-36!65;CL:0000839!3.32e-35!70;CL:0002194!1.88e-34!63;CL:0000576!1.88e-34!63;CL:0000040!1.88e-34!63;CL:0000559!1.88e-34!63;CL:0000763!5.09e-34!112;CL:0000049!5.09e-34!112;CL:0000838!9.81e-24!52;CL:0000542!4.73e-23!53;CL:0000051!4.73e-23!53;CL:0000134!5.17e-19!358;CL:0002320!1.21e-18!365;CL:0000219!3.25e-16!390;CL:0000791!6.08e-15!18;CL:0000789!6.08e-15!18;CL:0002420!6.08e-15!18;CL:0002419!6.08e-15!18;CL:0000790!6.08e-15!18;CL:0000034!1.69e-13!444;CL:0000084!1.90e-13!25;CL:0000827!1.90e-13!25;CL:0000048!2.28e-13!430;CL:0000723!3.38e-13!436;CL:0002393!3.29e-12!9;CL:0002397!3.29e-12!9;CL:0000236!1.97e-10!14;CL:0000625!6.50e-10!11;CL:0000945!9.39e-09!24;CL:0000826!9.39e-09!24;CL:0000624!6.58e-08!6;CL:0000094!7.64e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-44;33!CL:0002057;1.64e-44;33!CL:0000576;9.40e-39;48!CL:0000473;1.33e-30;39!CL:0000234;1.33e-30;39!CL:0000766;1.28e-27;69!CL:0002087;5.80e-19;104!CL:0000738;1.20e-18;136!CL:0002393;1.00e-16;6!CL:0002397;1.00e-16;6!CL:0000763;5.18e-14;100!CL:0000094;8.62e-14;8!CL:0000236;3.70e-13;13!CL:0000767;7.40e-10;3!CL:0000081;8.25e-10;11!CL:0000875;2.63e-09;3!CL:0000623;2.63e-09;3!CL:0002396;2.63e-09;3!CL:0000784;6.02e-09;3!CL:0000219;8.53e-09;193!CL:0000542;3.83e-08;53!CL:0000988;5.68e-08;177!CL:0000624;7.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.92e-74,42;CL:0002057,4.92e-74,42;CL:0000738,1.76e-70,136;CL:0000473,1.39e-63,48;CL:0000234,1.39e-63,48;CL:0002087,1.81e-59,115;CL:0000766,2.56e-59,72;CL:0000037,1.48e-56,168;CL:0002031,1.62e-56,120;CL:0002009,2.33e-53,61;CL:0000988,5.57e-53,177;CL:0002194,4.65e-52,59;CL:0000576,4.65e-52,59;CL:0000040,4.65e-52,59;CL:0000559,4.65e-52,59;CL:0002032,3.35e-51,161;CL:0000837,3.35e-51,161;CL:0000557,9.03e-48,67;CL:0000839,1.33e-45,66;CL:0000763,3.16e-38,108;CL:0000049,3.16e-38,108;CL:0002393,1.89e-24,9;CL:0002397,1.89e-24,9;CL:0000134,1.89e-19,354;CL:0002320,8.49e-19,361;CL:0000219,2.13e-17,386;CL:0000034,2.62e-14,441;CL:0000094,6.83e-14,8;CL:0000048,1.10e-13,427;CL:0000723,2.68e-13,433;CL:0000236,2.44e-12,14;CL:0000838,8.31e-12,52;CL:0000542,1.66e-11,53;CL:0000051,1.66e-11,53;CL:0000081,7.00e-10,11;CL:0000767,7.69e-10,3;CL:0000875,2.29e-09,3;CL:0002396,2.29e-09,3;CL:0000623,2.88e-09,3;CL:0000825,2.88e-09,3;CL:0000784,1.48e-08,3;CL:0000624,1.51e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-52;42!CL:0000049;4.20e-11;108!CL:0000051;3.83e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-35!102;UBERON:0003061!1.63e-35!102;UBERON:0002371!2.88e-33!80;UBERON:0002193!9.67e-33!112;UBERON:0001474!1.10e-29!86;UBERON:0002405!5.22e-25!115;UBERON:0004765!1.17e-22!101;UBERON:0001434!1.17e-22!101;UBERON:0002384!2.82e-17!375;UBERON:0003081!3.11e-11!216;UBERON:0002204!4.36e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-43,76;UBERON:0001474,1.13e-39,82;UBERON:0002405,7.00e-36,93;UBERON:0002390,1.12e-35,98;UBERON:0003061,1.12e-35,98;UBERON:0004765,2.67e-35,90;UBERON:0002193,1.91e-31,108;UBERON:0001434,8.18e-31,100;UBERON:0002384,6.60e-18,371;UBERON:0002204,1.16e-14,167;UBERON:0003081,3.91e-12,203 | |||
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|short_description=p4@LOC729324 | |||
}} | }} |
Latest revision as of 00:45, 18 September 2015
Short description: | p4@LOC729324 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC729324_5end |
Coexpression cluster: | C1010_CD19_Neutrophils_Eosinophils_CD14_Mast_CD8_CD4 |
Association with transcript: | -410bp_to_BC041895_5end |
EntrezGene: | LOC729324 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-43 | 76 |
bone element | 1.13e-39 | 82 |
immune system | 7.00e-36 | 93 |
hematopoietic system | 1.12e-35 | 98 |
blood island | 1.12e-35 | 98 |
skeletal element | 2.67e-35 | 90 |
hemolymphoid system | 1.91e-31 | 108 |
skeletal system | 8.18e-31 | 100 |
connective tissue | 6.60e-18 | 371 |
musculoskeletal system | 1.16e-14 | 167 |
lateral plate mesoderm | 3.91e-12 | 203 |