FFCP PHASE1:Hg19::chr2:70166156..70166179,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:70166156..70166179,+
|short_description=p4@MXD1
|description=CAGE_peak_4_at_MXD1_5end
|association_with_transcript=-84bp_to_BC051693_5end
|EntrezGene=4084...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4084 | |EntrezGene=4084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6761 | |HGNC=6761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_BC051693_5end | |||
|cluster_id=chr2:70166156..70166179,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_MXD1_5end | |||
|id=chr2:70166156..70166179,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-29!42;CL:0000860!2.25e-28!45;CL:0000766!3.35e-28!76;CL:0002009!4.24e-24!65;CL:0002194!3.96e-23!63;CL:0000576!3.96e-23!63;CL:0000040!3.96e-23!63;CL:0000559!3.96e-23!63;CL:0000557!9.76e-23!71;CL:0000839!3.69e-21!70;CL:0000763!2.24e-19!112;CL:0000049!2.24e-19!112;CL:0000738!5.41e-15!140;CL:0002032!2.23e-11!165;CL:0000837!2.23e-11!165;CL:0002031!4.54e-11!124;CL:0002087!9.81e-11!119;CL:0000037!1.18e-10!172;CL:0000566!1.18e-10!172;CL:0000988!1.04e-08!182;CL:0000094!9.69e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-71;33!CL:0002057;5.53e-71;33!CL:0000473;4.66e-57;39!CL:0000234;4.66e-57;39!CL:0000576;5.45e-32;48!CL:0000766;3.19e-24;69!CL:0000763;3.22e-14;100!CL:0000775;1.51e-12;3!CL:0000094;6.31e-12;8!CL:0000738;1.08e-09;136!CL:0002087;7.67e-09;104!CL:0000081;1.46e-08;11!CL:0000771;1.73e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.90e-61,42;CL:0002057,9.90e-61,42;CL:0000473,2.51e-60,48;CL:0000234,2.51e-60,48;CL:0000766,9.83e-53,72;CL:0002194,1.12e-46,59;CL:0000576,1.12e-46,59;CL:0000040,1.12e-46,59;CL:0000559,1.12e-46,59;CL:0002009,6.47e-45,61;CL:0000839,5.65e-41,66;CL:0000557,2.95e-40,67;CL:0000763,2.36e-32,108;CL:0000049,2.36e-32,108;CL:0000738,1.64e-25,136;CL:0002087,5.98e-22,115;CL:0002031,1.02e-20,120;CL:0002032,3.45e-20,161;CL:0000837,3.45e-20,161;CL:0000037,5.54e-19,168;CL:0000988,1.42e-17,177;CL:0000775,1.48e-12,3;CL:0000094,5.85e-12,8;CL:0000081,1.39e-08,11;CL:0000771,1.55e-08,2;CL:0000134,8.87e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-45;42!CL:0000049;1.41e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.43e-22!102;UBERON:0003061!4.43e-22!102;UBERON:0002193!1.04e-20!112;UBERON:0002371!1.13e-18!80;UBERON:0001474!2.17e-17!86;UBERON:0002405!5.03e-15!115;UBERON:0004765!5.15e-14!101;UBERON:0001434!5.15e-14!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-10;15!UBERON:0000179;1.12e-10;15!UBERON:0000463;1.12e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.18e-41,98;UBERON:0003061,9.18e-41,98;UBERON:0002193,3.59e-36,108;UBERON:0002371,1.24e-34,76;UBERON:0001474,1.46e-31,82;UBERON:0004765,4.21e-28,90;UBERON:0002405,5.88e-27,93;UBERON:0001434,1.49e-24,100;UBERON:0003081,3.83e-16,203;UBERON:0002204,7.13e-14,167;UBERON:0000178,1.27e-10,15;UBERON:0000179,1.27e-10,15;UBERON:0000463,1.27e-10,15;UBERON:0000926,2.83e-09,315;UBERON:0004120,2.83e-09,315;UBERON:0006603,2.83e-09,315 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.802177789880567,0.651032612147555,0.895661896959697,0,0.515151135268373,2.18097358169347,1.51150377475524,0.485168122375632,4.64858073811369,0.411167888021826,1.23882548358041,6.61692502340946,1.5369642391746,0.945928919554341,8.61864201841546,8.39130088658974,4.06279459783025,8.84738995850242,4.09359225086769,3.14612878223118,30.3023053447194,21.5022448140983,18.5407766481722,1.9791078011203,3.39088217956774,4.68847225585964,9.28669563611469,2.8369261234557,4.9825779919646,4.01997864410789,3.12889751052121,1.95469960234605,7.26479403160043,2.20966581592539,4.43047342417238,0.211255286311942,0.425208599930087,0.209658645508376,1.01095768031846,0.150176892841506,0.48217676009124,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.384273959177026,0,0.657751618414705,0.552700035571697,0,0.14828656316206,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,10.5424333948851,3.87780264148325,0,0,0,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,25.4662388142042,38.8909896965232,21.9640222121099,0,0,0,0,0.356857977594324,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,1.01289087829486,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0,0.127612712494584,0.809262246844399,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,0,0.470719003883896,0,0,0,0.229723400206959,1.01489521846434,3.0585488285695,5.69647187174163,2.62054953003568,0.822724546172388,2.59389324477087,3.24018862342869,3.17250070517708,0,0,0,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0.687010689511529,0,0.447352215784832,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,1.52581736317083,0.442317039724898,0,0,0,0.697118721393016,0.153900517007594,0.227884111694002,0.23056390438806,0.628303510868405,0,0.31900115973192,0.0915975934018623,1.5991043280559,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.141353071433941,0,0,0.530745387020035,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0.751617097072463,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0.0821154570532092,1.45483524732629,0.264768380074501,0.225980740780532,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,1.1524383839052,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.247247575143499,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0.082092520749339,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.533937062838473,0.314408610199332,1.24271716604159,0.992332043623902,0.592834895693833,0,0,0,0,0,0,0.157054096250234,0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| ||
|short_description=p4@MXD1 | |||
}} | }} |
Latest revision as of 05:06, 18 September 2015
Short description: | p4@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MXD1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -84bp_to_BC051693_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.90e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.90e-61 | 42 |
defensive cell | 2.51e-60 | 48 |
phagocyte | 2.51e-60 | 48 |
myeloid leukocyte | 9.83e-53 | 72 |
monopoietic cell | 1.12e-46 | 59 |
monocyte | 1.12e-46 | 59 |
monoblast | 1.12e-46 | 59 |
promonocyte | 1.12e-46 | 59 |
macrophage dendritic cell progenitor | 6.47e-45 | 61 |
myeloid lineage restricted progenitor cell | 5.65e-41 | 66 |
granulocyte monocyte progenitor cell | 2.95e-40 | 67 |
myeloid cell | 2.36e-32 | 108 |
common myeloid progenitor | 2.36e-32 | 108 |
leukocyte | 1.64e-25 | 136 |
nongranular leukocyte | 5.98e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-20 | 120 |
hematopoietic oligopotent progenitor cell | 3.45e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-20 | 161 |
hematopoietic stem cell | 5.54e-19 | 168 |
hematopoietic cell | 1.42e-17 | 177 |
neutrophil | 1.48e-12 | 3 |
granulocyte | 5.85e-12 | 8 |
blood cell | 1.39e-08 | 11 |
eosinophil | 1.55e-08 | 2 |
mesenchymal cell | 8.87e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.18e-41 | 98 |
blood island | 9.18e-41 | 98 |
hemolymphoid system | 3.59e-36 | 108 |
bone marrow | 1.24e-34 | 76 |
bone element | 1.46e-31 | 82 |
skeletal element | 4.21e-28 | 90 |
immune system | 5.88e-27 | 93 |
skeletal system | 1.49e-24 | 100 |
lateral plate mesoderm | 3.83e-16 | 203 |
musculoskeletal system | 7.13e-14 | 167 |
blood | 1.27e-10 | 15 |
haemolymphatic fluid | 1.27e-10 | 15 |
organism substance | 1.27e-10 | 15 |
mesoderm | 2.83e-09 | 315 |
mesoderm-derived structure | 2.83e-09 | 315 |
presumptive mesoderm | 2.83e-09 | 315 |