FFCP PHASE1:Hg19::chr2:74776647..74776658,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:74776647..74776658,-
|short_description=p9@LOXL3
|description=CAGE_peak_9_at_LOXL3_5end
|association_with_transcript=44bp_to_ENST00000481835_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84695 | |EntrezGene=84695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |HGNC=13869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000481835_5end | |||
|cluster_id=chr2:74776647..74776658,- | |||
|description=CAGE_peak_9_at_LOXL3_5end | |||
|id=chr2:74776647..74776658,- | |||
|ontology_enrichment_celltype=CL:0000066!7.76e-12!254;CL:0002322!4.23e-10!5;CL:0000039!6.34e-09!7;CL:0000586!6.34e-09!7;CL:0002076!9.14e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.19e-30;2!CL:0000242;5.19e-30;2!CL:0000312;1.26e-12;5!CL:0000240;1.12e-10;6!CL:0000311;1.12e-10;6!CL:0000079;1.12e-10;6!CL:0000237;1.12e-10;6!CL:0000540;2.29e-10;6!CL:0000404;2.29e-10;6!CL:0002319;8.94e-09;25!CL:0002253;2.23e-08;2!CL:0000362;2.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.49e-30,2;CL:0000312,1.19e-12,5;CL:0000240,1.07e-10,6;CL:0000311,1.07e-10,6;CL:0000079,1.07e-10,6;CL:0000237,1.07e-10,6;CL:0000036,1.07e-10,6;CL:0000357,1.07e-10,6;CL:0000114,1.07e-10,6;CL:0000540,2.09e-10,6;CL:0000031,2.09e-10,6;CL:0000404,2.09e-10,6;CL:0002319,8.41e-09,25;CL:0002253,2.48e-08,2;CL:0000047,5.00e-08,8;CL:0000362,2.02e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.12e-10;6!CL:0000114;1.12e-10;6!CL:0000031;2.29e-10;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.18e-27!143;DOID:305!9.09e-25!106;DOID:162!8.14e-17!235;DOID:14566!4.31e-16!239;DOID:1749!4.34e-13!14;DOID:3119!2.99e-09!14;DOID:3095!2.18e-07!22;DOID:2994!2.18e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;3.07e-15;4!DOID:3119;1.12e-09;14!DOID:1325;4.12e-09;7!DOID:3904;4.12e-09;7!DOID:3905;2.81e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.67e-15,4;DOID:3119,1.17e-09,14;DOID:1325,4.57e-09,7;DOID:3904,4.57e-09,7;DOID:3905,3.04e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.00e-12!9;UBERON:0000344!2.33e-10!12;UBERON:0001557!1.95e-07!19;UBERON:0003343!4.18e-07!4;UBERON:0004785!4.18e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@LOXL3 | |||
}} | }} |
Latest revision as of 12:00, 18 September 2015
Short description: | p9@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LOXL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000481835_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.49e-30 | 2 |
keratinocyte | 1.19e-12 | 5 |
stratified squamous epithelial cell | 1.07e-10 | 6 |
keratin accumulating cell | 1.07e-10 | 6 |
stratified epithelial cell | 1.07e-10 | 6 |
keratinizing barrier epithelial cell | 1.07e-10 | 6 |
epithelial fate stem cell | 1.07e-10 | 6 |
stratified epithelial stem cell | 1.07e-10 | 6 |
surface ectodermal cell | 1.07e-10 | 6 |
neuron | 2.09e-10 | 6 |
neuroblast | 2.09e-10 | 6 |
electrically signaling cell | 2.09e-10 | 6 |
neural cell | 8.41e-09 | 25 |
epithelial cell of large intestine | 2.48e-08 | 2 |
neuronal stem cell | 5.00e-08 | 8 |
epidermal cell | 2.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.67e-15 | 4 |
gastrointestinal system cancer | 1.17e-09 | 14 |
bronchus cancer | 4.57e-09 | 7 |
bronchogenic carcinoma | 4.57e-09 | 7 |
lung carcinoma | 3.04e-07 | 9 |