FFCP PHASE1:Hg19::chr3:157217305..157217322,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:157217305..157217322,-
|short_description=p4@VEPH1
|description=CAGE_peak_4_at_VEPH1_5end
|association_with_transcript=20bp_to_ENST00000392832_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79674 | |EntrezGene=79674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25735 | |HGNC=25735 | ||
|TSSclassifier=strong | |||
|UniProt=Q14D04 | |UniProt=Q14D04 | ||
|association_with_transcript=20bp_to_ENST00000392832_5end | |||
|cluster_id=chr3:157217305..157217322,- | |||
|description=CAGE_peak_4_at_VEPH1_5end | |||
|id=chr3:157217305..157217322,- | |||
|ontology_enrichment_celltype=CL:0000066!1.49e-20!254;CL:0002322!4.52e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.07e-07;7!CL:0000586;2.07e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.57e-10,253;CL:0000039,2.12e-07,7;CL:0000586,2.12e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.99e-23;29!UBERON:0000358;5.56e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.37e-33!106;DOID:0050687!3.96e-26!143;DOID:162!4.84e-15!235;DOID:14566!5.10e-15!239;DOID:299!3.47e-08!25;DOID:5093!2.71e-07!4;DOID:1612!2.71e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.54e-12;4!DOID:1612;1.54e-12;4!DOID:305;2.11e-08;106!DOID:0050615;1.04e-07;16!DOID:178;5.88e-07;1!DOID:326;5.88e-07;1!DOID:3978;5.88e-07;1!DOID:3394;5.88e-07;1!DOID:5844;5.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.03e-27,106;DOID:0050687,1.50e-20,143;DOID:5093,1.13e-12,4;DOID:1612,1.13e-12,4;DOID:162,2.49e-12,235;DOID:14566,6.03e-12,239;DOID:0050615,1.21e-07,16;DOID:178,5.90e-07,1;DOID:326,5.90e-07,1;DOID:3978,5.90e-07,1;DOID:3394,5.90e-07,1;DOID:5844,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.62e-14!9;UBERON:0008947!4.87e-11!38;UBERON:0003258!4.87e-11!38;UBERON:0000063!1.00e-08!97;UBERON:0004921!2.33e-07!129;UBERON:0004185!2.33e-07!129;UBERON:0001048!2.78e-07!168;UBERON:0000077!3.21e-07!130;UBERON:0001004!4.29e-07!72;UBERON:0000065!4.88e-07!53;UBERON:0000072!5.15e-07!46;UBERON:0001007!7.42e-07!155;UBERON:0001555!7.42e-07!155;UBERON:0007026!7.42e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.14e-35;9!UBERON:0001557;1.14e-35;9!UBERON:0000072;3.25e-16;37!UBERON:0000007;1.75e-11;2!UBERON:0000065;3.10e-11;44!UBERON:0001004;7.87e-08;65!UBERON:0001896;1.11e-07;3!UBERON:0005290;1.11e-07;3!UBERON:0002294;2.99e-07;7!UBERON:0001173;2.99e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.20e-36,9;UBERON:0008947,6.43e-17,38;UBERON:0003258,6.43e-17,38;UBERON:0001557,2.61e-16,19;UBERON:0000072,3.20e-13,47;UBERON:0000007,2.28e-11,2;UBERON:0000065,3.35e-11,54;UBERON:0001041,6.08e-10,87;UBERON:0001004,5.44e-09,74;UBERON:0001896,1.28e-07,3;UBERON:0005290,1.28e-07,3;UBERON:0010096,1.28e-07,3;UBERON:0004921,1.59e-07,118 | |||
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| ||
|short_description=p4@VEPH1 | |||
}} | }} |
Latest revision as of 07:46, 16 September 2015
Short description: | p4@VEPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VEPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000392832_5end |
EntrezGene: | VEPH1 |
HGNC: | 25735 |
UniProt: | Q14D04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.57e-10 | 253 |
germ line cell | 2.12e-07 | 7 |
germ cell | 2.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.20e-36 | 9 |
respiratory primordium | 6.43e-17 | 38 |
endoderm of foregut | 6.43e-17 | 38 |
upper respiratory tract | 2.61e-16 | 19 |
segment of respiratory tract | 3.20e-13 | 47 |
pituitary gland | 2.28e-11 | 2 |
respiratory tract | 3.35e-11 | 54 |
foregut | 6.08e-10 | 87 |
respiratory system | 5.44e-09 | 74 |
medulla oblongata | 1.28e-07 | 3 |
myelencephalon | 1.28e-07 | 3 |
future myelencephalon | 1.28e-07 | 3 |
subdivision of digestive tract | 1.59e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.03e-27 | 106 |
cell type cancer | 1.50e-20 | 143 |
thoracic cancer | 1.13e-12 | 4 |
breast cancer | 1.13e-12 | 4 |
cancer | 2.49e-12 | 235 |
disease of cellular proliferation | 6.03e-12 | 239 |
respiratory system cancer | 1.21e-07 | 16 |
vascular disease | 5.90e-07 | 1 |
ischemia | 5.90e-07 | 1 |
extrinsic cardiomyopathy | 5.90e-07 | 1 |
myocardial ischemia | 5.90e-07 | 1 |
myocardial infarction | 5.90e-07 | 1 |