FFCP PHASE1:Hg19::chr3:98614163..98614171,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:98614163..98614171,-
|short_description=p48@DCBLD2
|description=CAGE_peak_48_at_DCBLD2_5end
|association_with_transcript=84bp_to_ENST00000486004_5end
|Ent...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131566 | |EntrezGene=131566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24627 | |HGNC=24627 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_ENST00000486004_5end | |||
|cluster_id=chr3:98614163..98614171,- | |||
|description=CAGE_peak_48_at_DCBLD2_5end | |||
|id=chr3:98614163..98614171,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.65e-34;3!CL:0000067;4.65e-34;3!CL:0005012;4.65e-34;3!CL:0002304;4.65e-34;3!CL:0000075;5.58e-09;27!CL:0000306;1.69e-07;4!CL:0002222;1.69e-07;4!CL:0002224;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.33e-34,3;CL:0000067,3.33e-34,3;CL:0005012,3.33e-34,3;CL:0002304,3.33e-34,3;CL:0000075,5.14e-09,27;CL:0000306,1.59e-07,4;CL:0002222,1.59e-07,4;CL:0002224,1.59e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!2.70e-14!29;DOID:120!7.57e-14!27;DOID:2394!2.21e-12!14;DOID:14566!8.50e-11!239;DOID:162!7.42e-09!235;DOID:0050687!2.28e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0003134!2.58e-08!37;UBERON:0000474!2.58e-08!37;UBERON:0000992!3.96e-08!13;UBERON:0000488!5.26e-08!4;UBERON:0005156!9.24e-08!59;UBERON:0000990!9.24e-08!59;UBERON:0003100!4.58e-07!41;UBERON:0003133!6.15e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.65e-34;3!UBERON:0001775;4.65e-34;3!UBERON:0000488;7.63e-26;4!UBERON:0007625;5.33e-21;11!UBERON:0002203;1.33e-17;6!UBERON:0001768;1.33e-17;6!UBERON:0002200;1.33e-17;6!UBERON:0001801;1.14e-16;14!UBERON:0000019;1.77e-12;19!UBERON:0000047;1.77e-12;19!UBERON:0004088;1.77e-12;19!UBERON:0010230;1.77e-12;19!UBERON:0000970;6.87e-12;20!UBERON:0002104;2.34e-11;21!UBERON:0001456;2.34e-11;21!UBERON:0000020;1.99e-10;23!UBERON:0006876;4.62e-10;11!UBERON:0001032;5.07e-10;24!UBERON:0004456;5.07e-10;24!UBERON:0010077;1.69e-07;4!UBERON:0005389;1.69e-07;4!UBERON:0000484;1.69e-07;4!UBERON:0000965;1.69e-07;4!UBERON:0001803;1.69e-07;4!UBERON:0010371;2.35e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.33e-34,3;UBERON:0001775,3.33e-34,3;UBERON:0000488,5.94e-26,4;UBERON:0007625,4.34e-21,11;UBERON:0002203,1.12e-17,6;UBERON:0001768,1.12e-17,6;UBERON:0002200,1.12e-17,6;UBERON:0001801,9.68e-17,14;UBERON:0000019,6.14e-12,20;UBERON:0000047,6.14e-12,20;UBERON:0010312,6.14e-12,20;UBERON:0004088,6.14e-12,20;UBERON:0010230,6.14e-12,20;UBERON:0003072,6.14e-12,20;UBERON:0004128,6.14e-12,20;UBERON:0003071,6.14e-12,20;UBERON:0000970,2.11e-11,21;UBERON:0002104,2.11e-11,21;UBERON:0001456,6.47e-11,22;UBERON:0006876,4.22e-10,11;UBERON:0000020,4.63e-10,24;UBERON:0001032,4.63e-10,24;UBERON:0004456,4.63e-10,24;UBERON:0005085,6.23e-08,31;UBERON:0010077,1.59e-07,4;UBERON:0005389,1.59e-07,4;UBERON:0000484,1.59e-07,4;UBERON:0002546,1.59e-07,4;UBERON:0000965,1.59e-07,4;UBERON:0001803,1.59e-07,4;UBERON:0003073,1.59e-07,4;UBERON:0005426,1.59e-07,4;UBERON:0003056,7.64e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,2.4390233720882,1.58102614247627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,1.26216887122057,0,0,0,0.302256294682921,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0.288109595976299,0.124252535565433,0,0.543616824294456,0.418411385249333,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0.856396000634902,0,0,0,0,0,1.66441758450784,0.189403005275089,0.50313580350515,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,1.06336685823198,0.521745061811734,0.601030435988874,0.380805212168795,0,0.909243296012797,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.76872455576384,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0.828324005113957,0.681707238073262,0,0.4582137370881,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,2.4390233720882,1.58102614247627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,1.26216887122057,0,0,0,0.302256294682921,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0.288109595976299,0.124252535565433,0,0.543616824294456,0.418411385249333,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0.151649117541648,0.856396000634902,0,0,0,0,0,1.66441758450784,0.189403005275089,0.50313580350515,0,0,0,0.15543720058278,0.147855149989634,0,0,0.310525913752519,0.414706207840855,1.06336685823198,0.521745061811734,0.601030435988874,0.380805212168795,0,0.909243296012797,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.76872455576384,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0.828324005113957,0.681707238073262,0,0.4582137370881,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | ||
|short_description=p48@DCBLD2 | |||
}} | }} |
Latest revision as of 23:12, 19 September 2015
Short description: | p48@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_48_at_DCBLD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000486004_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.33e-34 | 3 |
ciliated epithelial cell | 3.33e-34 | 3 |
multi-ciliated epithelial cell | 3.33e-34 | 3 |
non-pigmented ciliary epithelial cell | 3.33e-34 | 3 |
columnar/cuboidal epithelial cell | 5.14e-09 | 27 |
crystallin accumulating cell | 1.59e-07 | 4 |
vertebrate lens cell | 1.59e-07 | 4 |
lens epithelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.33e-34 | 3 |
ciliary body | 3.33e-34 | 3 |
atypical epithelium | 5.94e-26 | 4 |
pigment epithelium of eye | 4.34e-21 | 11 |
vasculature of eye | 1.12e-17 | 6 |
uvea | 1.12e-17 | 6 |
vasculature of head | 1.12e-17 | 6 |
anterior segment of eyeball | 9.68e-17 | 14 |
camera-type eye | 6.14e-12 | 20 |
simple eye | 6.14e-12 | 20 |
immature eye | 6.14e-12 | 20 |
ocular region | 6.14e-12 | 20 |
eyeball of camera-type eye | 6.14e-12 | 20 |
optic cup | 6.14e-12 | 20 |
optic vesicle | 6.14e-12 | 20 |
eye primordium | 6.14e-12 | 20 |
eye | 2.11e-11 | 21 |
visual system | 2.11e-11 | 21 |
face | 6.47e-11 | 22 |
vasculature of organ | 4.22e-10 | 11 |
sense organ | 4.63e-10 | 24 |
sensory system | 4.63e-10 | 24 |
entire sense organ system | 4.63e-10 | 24 |
ectodermal placode | 6.23e-08 | 31 |
cuboidal epithelium | 1.59e-07 | 4 |
transparent eye structure | 1.59e-07 | 4 |
simple cuboidal epithelium | 1.59e-07 | 4 |
cranial placode | 1.59e-07 | 4 |
lens of camera-type eye | 1.59e-07 | 4 |
epithelium of lens | 1.59e-07 | 4 |
lens placode | 1.59e-07 | 4 |
lens vesicle | 1.59e-07 | 4 |
pre-chordal neural plate | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.55e-13 | 2 |