FFCP PHASE1:Hg19::chr2:238392315..238392324,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238392315..238392324,+ | |||
|coexpression_cluster_id=C1647 | |coexpression_cluster_id=C1647 | ||
|description=CAGE_peak_at_chr2:238392315..238392324,+ | |description=CAGE_peak_at_chr2:238392315..238392324,+ |
Latest revision as of 08:12, 29 July 2015
Short description: | p@chr2:238392315..238392324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238392315..238392324, + |
Coexpression cluster: | C1647_Melanocyte_Mast_optic_Basophils_CD14_brain_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr2:238392315..238392324+ |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.65e-59 | 5 |
basophil mast progenitor cell | 1.65e-59 | 5 |
endocrine cell | 1.55e-33 | 9 |
light melanocyte | 1.85e-12 | 3 |
secretory cell | 5.28e-09 | 36 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.44e-09 | 4 |
breast cancer | 1.44e-09 | 4 |
Showing 1 to 2 of 2 entries