FFCP PHASE1:Hg19::chr1:209806051..209806064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209806051..209806064,- | |||
|coexpression_cluster_id=C571 | |coexpression_cluster_id=C571 | ||
|description=CAGE_peak_at_chr1:209806051..209806064,- | |description=CAGE_peak_at_chr1:209806051..209806064,- | ||
Latest revision as of 03:20, 28 July 2015
| Short description: | p@chr1:209806051..209806064, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:209806051..209806064, - |
| Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr1:209806051..209806064- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 2.29e-30 | 42 |
| respiratory epithelial cell | 5.04e-28 | 13 |
| endodermal cell | 2.55e-22 | 58 |
| epithelial cell | 7.68e-22 | 253 |
| epithelial cell of tracheobronchial tree | 7.43e-17 | 9 |
| epithelial cell of lower respiratory tract | 7.43e-17 | 9 |
| general ecto-epithelial cell | 1.02e-16 | 14 |
| transitional epithelial cell | 2.18e-13 | 4 |
| urothelial cell | 2.18e-13 | 4 |
| extraembryonic cell | 4.64e-11 | 19 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 1.26e-15 | 14 |
| membranous layer | 1.26e-15 | 14 |
| lower respiratory tract epithelium | 7.77e-11 | 3 |
| epithelium of bronchus | 7.77e-11 | 3 |
| chorion | 9.84e-11 | 7 |
| urothelium | 1.05e-10 | 5 |
| gingival epithelium | 6.49e-10 | 3 |
| tracheobronchial tree | 1.19e-09 | 15 |
| lower respiratory tract | 1.19e-09 | 15 |
| transitional epithelium | 6.50e-09 | 6 |
Showing 1 to 10 of 32 entries
