FFCP PHASE1:Hg19::chr4:44869447..44869474,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:44869447..44869474,+
|short_description=p@chr4:44869447..44869474,+
|description=CAGE_peak_at_chr4:44869447..44869474,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:44869447..44869474,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr4:44869447..44869474,+ | |||
|id=chr4:44869447..44869474,+ | |||
|ontology_enrichment_celltype=CL:0000632!7.37e-10!2;CL:0002195!2.33e-09!2;CL:0002571!2.33e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.24e-13;1!CL:0002097;2.15e-07;2!CL:0002554;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.73e-13,1;CL:0002097,2.15e-07,2;CL:0002554,3.70e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.31e-27;4!UBERON:0007284;4.31e-27;4!UBERON:0000358;3.76e-13;1!UBERON:0007297;4.55e-07;2 | |||
|ontology_enrichment_disease=DOID:114!4.56e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;9.01e-25;2!DOID:178;3.76e-13;1!DOID:326;3.76e-13;1!DOID:3978;3.76e-13;1!DOID:3394;3.76e-13;1!DOID:5844;3.76e-13;1!DOID:1287;6.84e-13;4!DOID:3112;7.24e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.02e-25,2;DOID:178,3.76e-13,1;DOID:326,3.76e-13,1;DOID:3978,3.76e-13,1;DOID:3394,3.76e-13,1;DOID:5844,3.76e-13,1;DOID:3112,6.82e-13,1;DOID:1287,6.84e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!3.71e-14!3;UBERON:0009751!3.71e-14!3;UBERON:0000946!3.71e-14!3;UBERON:0002523!3.71e-14!3;UBERON:0005983!3.71e-14!3;UBERON:0002165!3.71e-14!3;UBERON:0002062!3.71e-14!3;UBERON:0007280!3.71e-14!3;UBERON:0004151!1.08e-13!3;UBERON:0007100!1.39e-11!27;UBERON:0002133!4.18e-10!2;UBERON:0002081!8.75e-10!2;UBERON:0003135!4.63e-09!11;UBERON:0003101!4.43e-08!22;UBERON:0000079!4.43e-08!22;UBERON:0002342!9.17e-08!14;UBERON:0005062!9.17e-08!14;UBERON:0004145!8.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.29e-36;3!UBERON:0000946;7.29e-36;3!UBERON:0002133;7.99e-25;2!UBERON:0010313;5.19e-19;10!UBERON:0007100;1.27e-16;25!UBERON:0002135;1.82e-13;1!UBERON:0002134;3.76e-13;1!UBERON:0005208;3.76e-13;1!UBERON:0004145;3.76e-13;1!UBERON:0005946;3.76e-13;1!UBERON:0005965;3.76e-13;1!UBERON:0002078;3.76e-13;1!UBERON:0002146;7.24e-13;1!UBERON:0001301;7.24e-13;1!UBERON:0005623;7.24e-13;1!UBERON:0002081;3.28e-07;2!UBERON:0000078;4.55e-07;2!UBERON:0002012;4.55e-07;2!UBERON:0008886;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,5.42e-36,3;UBERON:0009751,5.42e-36,3;UBERON:0000946,5.42e-36,3;UBERON:0002523,5.42e-36,3;UBERON:0005983,5.42e-36,3;UBERON:0002165,5.42e-36,3;UBERON:0002062,5.42e-36,3;UBERON:0007280,5.42e-36,3;UBERON:0002133,7.09e-25,2;UBERON:0007100,1.25e-20,27;UBERON:0010313,5.19e-19,10;UBERON:0002342,5.19e-19,10;UBERON:0005062,5.19e-19,10;UBERON:0004145,1.88e-16,3;UBERON:0004797,7.90e-16,7;UBERON:0002135,1.82e-13,1;UBERON:0002134,3.33e-13,1;UBERON:0005208,3.33e-13,1;UBERON:0005946,3.33e-13,1;UBERON:0005965,3.33e-13,1;UBERON:0002078,3.33e-13,1;UBERON:0002146,6.06e-13,1;UBERON:0005623,6.06e-13,1;UBERON:0001301,7.68e-13,1;UBERON:0003103,3.79e-10,68;UBERON:0000948,4.60e-08,24;UBERON:0005498,4.60e-08,24;UBERON:0004140,4.60e-08,24;UBERON:0009881,4.60e-08,24;UBERON:0004141,4.60e-08,24;UBERON:0003084,4.60e-08,24;UBERON:0007005,4.60e-08,24;UBERON:0004139,4.60e-08,24;UBERON:0004291,4.60e-08,24;UBERON:0002081,3.09e-07,2;UBERON:0010227,3.09e-07,2;UBERON:0000078,5.28e-07,2;UBERON:0007497,5.28e-07,2;UBERON:0003643,5.28e-07,2;UBERON:0003504,5.28e-07,2;UBERON:0003469,5.28e-07,2;UBERON:0003496,5.28e-07,2;UBERON:0002012,5.28e-07,2;UBERON:0008886,5.28e-07,2;UBERON:0007303,5.28e-07,2;UBERON:0002061,5.28e-07,2;UBERON:0005432,5.28e-07,2;UBERON:0004363,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,3.48613383440118,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15015027898508,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54062483435086,1.3749625440701,2.87149209830726,2.39614800598789,6.00916467391199,1.11585728720936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,15.2253529876197,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,3.48613383440118,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15015027898508,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54062483435086,1.3749625440701,2.87149209830726,2.39614800598789,6.00916467391199,1.11585728720936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,15.2253529876197,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr4:44869447..44869474,+ | |||
}} | }} |
Latest revision as of 05:23, 30 July 2015
Short description: | p@chr4:44869447..44869474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:44869447..44869474, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.73e-13 | 1 |
cortical cell of adrenal gland | 2.15e-07 | 2 |
fibroblast of lymphatic vessel | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.02e-25 | 2 |
vascular disease | 3.76e-13 | 1 |
ischemia | 3.76e-13 | 1 |
extrinsic cardiomyopathy | 3.76e-13 | 1 |
myocardial ischemia | 3.76e-13 | 1 |
myocardial infarction | 3.76e-13 | 1 |
papillary adenocarcinoma | 6.82e-13 | 1 |
cardiovascular system disease | 6.84e-13 | 4 |