FFCP PHASE1:Hg19::chrX:106163626..106163638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9075 | |EntrezGene=9075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2041 | |HGNC=2041 | ||
|TSSclassifier=strong | |||
|UniProt=P57739 | |UniProt=P57739 | ||
|association_with_transcript=0bp_to_ENST00000336803,uc004emt.1_5end | |association_with_transcript=0bp_to_ENST00000336803,uc004emt.1_5end | ||
|cluster_id=chrX:106163626..106163638,+ | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_2_at_CLDN2_5end | |description=CAGE_peak_2_at_CLDN2_5end | ||
Latest revision as of 22:18, 18 September 2015
| Short description: | p2@CLDN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CLDN2_5end |
| Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
| Association with transcript: | 0bp_to_ENST00000336803, uc004emt.1_5end |
| EntrezGene: | CLDN2 |
| HGNC: | 2041 |
| UniProt: | P57739 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@CLDN2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 1.00e-29 | 3 |
| ciliated epithelial cell | 1.00e-29 | 3 |
| multi-ciliated epithelial cell | 1.00e-29 | 3 |
| non-pigmented ciliary epithelial cell | 1.00e-29 | 3 |
| astrocyte of the cerebral cortex | 1.48e-28 | 3 |
| crystallin accumulating cell | 1.45e-21 | 4 |
| vertebrate lens cell | 1.45e-21 | 4 |
| lens epithelial cell | 1.45e-21 | 4 |
| oligodendrocyte | 1.63e-21 | 7 |
| macroglial cell | 1.63e-21 | 7 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| pigment epithelium of eye | 1.08e-41 | 11 |
| atypical epithelium | 4.50e-39 | 4 |
| neural plate | 2.12e-34 | 82 |
| presumptive neural plate | 2.12e-34 | 82 |
| neurectoderm | 1.07e-32 | 86 |
| anterior segment of eyeball | 1.21e-32 | 14 |
| medulla oblongata | 5.59e-30 | 3 |
| myelencephalon | 5.59e-30 | 3 |
| future myelencephalon | 5.59e-30 | 3 |
| ciliary epithelium | 1.00e-29 | 3 |
Showing 1 to 10 of 77 entries
