FFCP PHASE1:Hg19::chr5:151047121..151047143,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:151047121..151047143,-
|short_description=p12@SPARC
|description=CAGE_peak_12_at_SPARC_5end
|association_with_transcript=1bp_to_ENST00000537849_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000537849_5end | |||
|cluster_id=chr5:151047121..151047143,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_12_at_SPARC_5end | |||
|id=chr5:151047121..151047143,- | |||
|ontology_enrichment_celltype=CL:0000055!2.06e-26!180;CL:0000222!1.08e-16!119;CL:0000057!1.54e-16!75;CL:0000136!1.83e-10!15;CL:0000183!1.43e-09!59;CL:0000213!2.34e-09!57;CL:0000215!2.34e-09!57;CL:0000680!6.56e-09!57;CL:0000056!6.56e-09!57;CL:0000355!6.56e-09!57;CL:0000187!1.85e-08!54;CL:0000192!1.19e-07!42;CL:0000514!1.19e-07!42;CL:0000393!6.34e-07!60;CL:0000211!6.34e-07!60;CL:0000359!7.79e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.49e-11;13!CL:0000349;3.16e-10;19!CL:0000134;3.26e-10;55!CL:0000048;8.65e-09;58!CL:0000723;1.75e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-14,76;CL:0000222,2.15e-14,121;CL:0000136,1.01e-12,15;CL:0000349,2.02e-10,19;CL:0000048,1.26e-09,427;CL:0000723,7.14e-09,433;CL:0000034,6.30e-08,441;CL:0000680,6.90e-08,58;CL:0000056,6.90e-08,58;CL:0000355,6.90e-08,58;CL:0000187,9.24e-08,55;CL:0000213,1.09e-07,58;CL:0000215,1.09e-07,58;CL:0000192,5.07e-07,43;CL:0000514,5.07e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!4.22e-15!84;UBERON:0002049!8.04e-13!79;UBERON:0007798!8.04e-13!79;UBERON:0000055!3.48e-11!69;UBERON:0004535!6.87e-11!110;UBERON:0001981!1.28e-10!60;UBERON:0007500!1.28e-10!60;UBERON:0004537!1.28e-10!60;UBERON:0006965!1.28e-10!60;UBERON:0000914!1.57e-10!83;UBERON:0002329!1.57e-10!83;UBERON:0003077!1.57e-10!83;UBERON:0003059!1.57e-10!83;UBERON:0007282!1.57e-10!83;UBERON:0009618!1.57e-10!83;UBERON:0007285!1.57e-10!83;UBERON:0001009!3.84e-10!113;UBERON:0001134!1.85e-09!61;UBERON:0002036!1.85e-09!61;UBERON:0003082!1.85e-09!61;UBERON:0002385!2.04e-09!63;UBERON:0001015!2.04e-09!63;UBERON:0000383!2.04e-09!63;UBERON:0004290!3.89e-09!70;UBERON:0005256!1.44e-08!143;UBERON:0003914!2.03e-08!118;UBERON:0001637!4.62e-08!42;UBERON:0003509!4.62e-08!42;UBERON:0004572!4.62e-08!42;UBERON:0001013!6.23e-08!14;UBERON:0000478!8.72e-08!24;UBERON:0000486!2.83e-07!82;UBERON:0000490!3.01e-07!138;UBERON:0000475!3.02e-07!365;UBERON:0004573!6.27e-07!33;UBERON:0004571!6.27e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.65e-09;14!UBERON:0000478;3.13e-09;24!UBERON:0002384;9.62e-08;198!UBERON:0003688;6.86e-07;6!UBERON:0002358;6.86e-07;6!UBERON:0003684;6.86e-07;6!UBERON:0001178;6.86e-07;6!UBERON:0004457;9.55e-07;9!UBERON:0000042;9.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.87e-14,83;UBERON:0002049,1.73e-11,78;UBERON:0007798,1.73e-11,78;UBERON:0004535,8.49e-11,109;UBERON:0000055,2.83e-10,68;UBERON:0001009,5.46e-10,112;UBERON:0000926,8.22e-10,315;UBERON:0004120,8.22e-10,315;UBERON:0006603,8.22e-10,315;UBERON:0001013,1.50e-09,14;UBERON:0000478,2.25e-09,24;UBERON:0007500,3.54e-09,59;UBERON:0001981,3.54e-09,59;UBERON:0004537,3.54e-09,59;UBERON:0006965,3.54e-09,59;UBERON:0001134,1.09e-08,62;UBERON:0002036,1.09e-08,62;UBERON:0003082,1.09e-08,62;UBERON:0003914,1.68e-08,117;UBERON:0007503,4.42e-08,78;UBERON:0002385,4.91e-08,64;UBERON:0001015,4.91e-08,64;UBERON:0000383,4.91e-08,64;UBERON:0007524,1.71e-07,73;UBERON:0005256,2.02e-07,122;UBERON:0002329,2.69e-07,71;UBERON:0003059,2.69e-07,71;UBERON:0007282,2.69e-07,71;UBERON:0004290,2.69e-07,71;UBERON:0009618,2.69e-07,71;UBERON:0005631,3.44e-07,14;UBERON:0000158,3.44e-07,14;UBERON:0003077,4.98e-07,72;UBERON:0007285,4.98e-07,72;UBERON:0004923,5.91e-07,66;UBERON:0003688,7.11e-07,6;UBERON:0002358,7.11e-07,6;UBERON:0003684,7.11e-07,6;UBERON:0001178,7.11e-07,6;UBERON:0001637,7.26e-07,42;UBERON:0003509,7.26e-07,42;UBERON:0004572,7.26e-07,42 | |||
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| ||
|short_description=p12@SPARC | |||
}} | }} |
Latest revision as of 10:05, 16 September 2015
Short description: | p12@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 1bp_to_ENST00000537849_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.78e-14 | 76 |
mesodermal cell | 2.15e-14 | 121 |
fat cell | 1.01e-12 | 15 |
extraembryonic cell | 2.02e-10 | 19 |
multi fate stem cell | 1.26e-09 | 427 |
somatic stem cell | 7.14e-09 | 433 |
stem cell | 6.30e-08 | 441 |
muscle precursor cell | 6.90e-08 | 58 |
myoblast | 6.90e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.90e-08 | 58 |
muscle cell | 9.24e-08 | 55 |
lining cell | 1.09e-07 | 58 |
barrier cell | 1.09e-07 | 58 |
smooth muscle cell | 5.07e-07 | 43 |
smooth muscle myoblast | 5.07e-07 | 43 |